Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3912 Utricularia gibba HOM05D005354 ORTHO05D006315 4.1e-99 364.8 191 100.0
MSTRG.25527 Avicennia marina HOM05D005354 ORTHO05D006315 4.0e-62 241.9 170 77.1
Migut.E00837 Erythranthe guttata HOM05D005354 ORTHO05D006315 5.3e-62 241.5 171 75.4
Migut.E01656 Erythranthe guttata HOM05D005354 ORTHO05D006315 5.3e-62 241.5 171 75.4
SGA_v2.0_scaffold54G19448 Striga asiatica HOM05D005354 ORTHO05D006315 2.7e-58 229.2 171 73.1
Oeu040216.1 Olea europaea HOM05D005354 ORTHO05D006315 3.5e-58 228.8 171 71.3
Dinv21636 Davidia involucrata HOM05D005354 ORTHO05D006315 1.9e-56 223.0 170 71.8
Dinv39144 Davidia involucrata HOM05D005354 ORTHO05D006315 5.6e-56 221.5 170 70.6
Actinidia27464 Actinidia chinensis HOM05D005354 ORTHO05D006315 7.4e-56 221.1 171 69.6
CSS0011263 Camellia sinensis var. sinensis HOM05D005354 ORTHO05D006315 1.6e-55 219.9 172 68.0
CSS0003507 Camellia sinensis var. sinensis HOM05D005354 ORTHO05D006315 1.1e-54 217.2 172 68.0
CSS0039308 Camellia sinensis var. sinensis HOM05D005354 ORTHO05D006315 1.1e-54 217.2 172 68.0
QL12p012213 Quercus lobata HOM05D005354 ORTHO05D006315 5.3e-54 214.9 170 66.5
Solyc08g078660.3 Solanum lycopersicum HOM05D005354 ORTHO05D006315 5.3e-54 214.9 170 66.5
TAR629G2416 Trochodendron aralioides HOM05D005354 ORTHO05D006315 5.3e-54 214.9 171 66.1
Nitab4.5_0007598g0020 Nicotiana tabacum HOM05D005354 ORTHO05D006315 6.9e-54 214.5 170 67.1
Sopen08g027140 Solanum pennellii HOM05D005354 ORTHO05D006315 6.9e-54 214.5 170 66.5
CAN.G1367.6 Capsicum annuum HOM05D005354 ORTHO05D006315 2.0e-53 213.0 170 66.5
MBI04_g09494_MAGBIO Magnolia biondii HOM05D005354 ORTHO05D006315 2.0e-53 213.0 171 66.7
GSVIVG01001321001 Vitis vinifera HOM05D005354 ORTHO05D006315 4.5e-53 211.8 172 65.7
ATR0317G109 Amborella trichopoda HOM05D005354 ORTHO05D006315 5.8e-53 211.5 172 65.7
Ca_24574_v3 Cicer arietinum L. HOM05D005354 ORTHO05D006315 5.8e-53 211.5 171 68.4
Peaxi162Scf00174g00027 Petunia axillaris HOM05D005354 ORTHO05D006315 5.8e-53 211.5 170 66.5
Cc08_g12480 Coffea canephora HOM05D005354 ORTHO05D006315 1.0e-52 210.7 171 64.9
Nn1g01007 Nelumbo nucifera HOM05D005354 ORTHO05D006315 1.0e-52 210.7 171 66.1
Nitab4.5_0000312g0100 Nicotiana tabacum HOM05D005354 ORTHO05D006315 1.0e-52 210.7 170 65.9
Potri.003G076600 Populus trichocarpa HOM05D005354 ORTHO05D006315 1.0e-52 210.7 170 65.3
MELO3C013942.2 Cucumis melo HOM05D005354 ORTHO05D006315 2.2e-52 209.5 170 65.9
Rhsim07G0108200 Rhododendron simsii HOM05D005354 ORTHO05D006315 2.9e-52 209.1 171 65.5
vmacro14088 Vaccinium macrocarpon HOM05D005354 ORTHO05D006315 4.9e-52 208.4 171 65.5
CsaV3_3G002740 Cucumis sativus L. HOM05D005354 ORTHO05D006315 1.1e-51 207.2 170 64.7
Haze_07917 Corylus avellana HOM05D005354 ORTHO05D006315 1.4e-51 206.8 172 64.5
Potri.001G158200 Populus trichocarpa HOM05D005354 ORTHO05D006315 1.4e-51 206.8 170 64.1
Sed0003796 Sechium edule HOM05D005354 ORTHO05D006315 1.4e-51 206.8 170 65.9
Thhalv10016484m.g Eutrema salsugineum HOM05D005354 ORTHO05D006315 1.9e-51 206.5 172 65.1
Lalb_Chr05g0214491 Lupinus albus HOM05D005354 ORTHO05D006315 1.9e-51 206.5 172 65.1
CARHR129960 Cardamine hirsuta HOM05D005354 ORTHO05D006315 2.5e-51 206.1 172 64.5
Lalb_Chr09g0324401 Lupinus albus HOM05D005354 ORTHO05D006315 3.2e-51 205.7 172 65.7
CiPaw.11G153900 Carya illinoinensis HOM05D005354 ORTHO05D006315 4.2e-51 205.3 172 65.1
Thecc.03G252000 Theobroma cacao HOM05D005354 ORTHO05D006315 4.2e-51 205.3 172 64.5
AUR62042791 Chenopodium quinoa HOM05D005354 ORTHO05D006315 5.5e-51 204.9 171 66.1
Sp4g17990 Schrenkiella parvula HOM05D005354 ORTHO05D006315 5.5e-51 204.9 172 64.0
Sc01g0008460 Simmondsia chinensis HOM05D005354 ORTHO05D006315 7.1e-51 204.5 198 58.1
PSO170G3683 Papaver somniferum HOM05D005354 ORTHO05D006315 9.3e-51 204.1 172 63.4
AL4G31810 Arabidopsis lyrata HOM05D005354 ORTHO05D006315 1.2e-50 203.8 172 64.5
ClCG10G002710 Citrullus lanatus HOM05D005354 ORTHO05D006315 1.2e-50 203.8 170 63.5
Ciclev10019626m.g Citrus clementina HOM05D005354 ORTHO05D006315 1.2e-50 203.8 171 63.7
AUR62007515 Chenopodium quinoa HOM05D005354 ORTHO05D006315 1.6e-50 203.4 171 65.5
Manes.02G039200 Manihot esculenta HOM05D005354 ORTHO05D006315 1.6e-50 203.4 170 64.1
AUR62044247 Chenopodium quinoa HOM05D005354 ORTHO05D006315 2.7e-50 202.6 171 65.5
AT2G35720 Arabidopsis thaliana HOM05D005354 ORTHO05D006315 3.5e-50 202.2 172 64.0
Eucgr.E00426 Eucalyptus grandis HOM05D005354 ORTHO05D006315 3.5e-50 202.2 170 64.7
PSO017G6196 Papaver somniferum HOM05D005354 ORTHO05D006315 3.5e-50 202.2 172 62.8
BcaB06g28865 Brassica carinata HOM05D005354 ORTHO05D006315 4.6e-50 201.8 172 63.4
Sabra01G0133300 Salix brachista HOM05D005354 ORTHO05D006315 4.6e-50 201.8 170 62.9
Hund14561 Selenicereus undatus HOM05D005354 ORTHO05D006315 6.0e-50 201.4 177 63.8
TWI81G0349 Tripterygium wilfordii HOM05D005354 ORTHO05D006315 7.9e-50 201.1 172 63.4
Glyma.01G209800 Glycine max HOM05D005354 ORTHO05D006315 1.0e-49 200.7 172 62.2
Psat2g177520 Pisum sativum HOM05D005354 ORTHO05D006315 1.0e-49 200.7 171 63.7
RcHm_v2.0_Chr7g0203181 Rosa chinensis HOM05D005354 ORTHO05D006315 2.3e-49 199.5 172 62.8
A04p27170 Brassica napus HOM05D005354 ORTHO05D006315 3.0e-49 199.1 172 62.8
Lj2g0013106 Lotus japonicus HOM05D005354 ORTHO05D006315 5.1e-49 198.4 172 61.0
Prupe.5G069200 Prunus persica HOM05D005354 ORTHO05D006315 5.1e-49 198.4 172 64.0
EL10Ac5g13072 Beta vulgaris HOM05D005354 ORTHO05D006315 8.7e-49 197.6 171 66.1
Carub.0004s1745 Capsella rubella HOM05D005354 ORTHO05D006315 8.7e-49 197.6 172 62.2
BcaC02g07676 Brassica carinata HOM05D005354 ORTHO05D006315 1.1e-48 197.2 172 61.6
C04p64680 Brassica napus HOM05D005354 ORTHO05D006315 1.1e-48 197.2 172 61.6
BolC4t27945H Brassica oleracea HOM05D005354 ORTHO05D006315 1.1e-48 197.2 172 61.6
CANSAT21G0216 Cannabis sativa HOM05D005354 ORTHO05D006315 1.1e-48 197.2 172 62.2
MD06G1057900 Malus domestica HOM05D005354 ORTHO05D006315 1.1e-48 197.2 172 62.2
BraA04t18215Z Brassica rapa HOM05D005354 ORTHO05D006315 1.9e-48 196.4 172 62.2
TPR.G25879 Trifolium pratense HOM05D005354 ORTHO05D006315 1.9e-48 196.4 171 62.6
THA.LOC104815494 Tarenaya hassleriana HOM05D005354 ORTHO05D006315 2.5e-48 196.1 171 61.4
Ah.02g116720 Amaranthus hybridus HOM05D005354 ORTHO05D006315 3.3e-48 195.7 171 64.3
Lsat_1_v5_gn_6_91180 Lactuca sativa HOM05D005354 ORTHO05D006315 3.3e-48 195.7 171 64.3
arahy.Tifrunner.gnm1.ann1.BT71C1 Arachis hypogaea HOM05D005354 ORTHO05D006315 7.4e-48 194.5 172 62.2
arahy.Tifrunner.gnm1.ann1.LCH2QT Arachis hypogaea HOM05D005354 ORTHO05D006315 7.4e-48 194.5 172 62.2
Medtr5g012530 Medicago truncatula HOM05D005354 ORTHO05D006315 7.4e-48 194.5 171 64.3
Manes.01G080300 Manihot esculenta HOM05D005354 ORTHO05D006315 1.3e-47 193.7 170 61.2
Os10g0507800 Oryza sativa ssp. japonica HOM05D005354 ORTHO05D006315 1.3e-47 193.7 169 62.7
HanXRQChr03g0088591 Helianthus annuus HOM05D005354 ORTHO05D006315 2.1e-47 193.0 171 63.2
COL.COLO4_37182 Corchorus olitorius HOM05D005354 ORTHO05D006315 2.8e-47 192.6 172 59.9
Phvul.002G062800 Phaseolus vulgaris HOM05D005354 ORTHO05D006315 2.8e-47 192.6 172 61.6
PGR042G1820 Punica granatum HOM05D005354 ORTHO05D006315 4.8e-47 191.8 170 61.8
FAN04G2371 Fragaria x ananassa HOM05D005354 ORTHO05D006315 1.8e-46 189.9 172 60.5
Aa31LG9G12210 Aethionema arabicum HOM05D000808 ORTHO05D006315 2.4e-46 189.5 172 61.0
CDE04G0953 Ceratophyllum demersum HOM05D005354 ORTHO05D006315 2.4e-46 189.5 171 58.5
DCAR_027776 Daucus carota HOM05D005354 ORTHO05D006315 2.4e-46 189.5 171 62.6
VMungo1215G2766 Vigna mungo HOM05D005354 ORTHO05D006315 2.4e-46 189.5 172 61.0
FvH4_5g18830 Fragaria vesca HOM05D005354 ORTHO05D006315 3.1e-46 189.1 172 60.5
Aqoxy7G00759 Aquilegia oxysepala HOM05D005354 ORTHO05D006315 4.1e-46 188.7 171 59.6
FAN18G0938 Fragaria x ananassa HOM05D005354 ORTHO05D006315 4.1e-46 188.7 172 60.5
FAN13G0823 Fragaria x ananassa HOM05D005354 ORTHO05D006315 6.9e-46 188.0 172 60.5
TWI60G0726 Tripterygium wilfordii HOM05D005354 ORTHO05D006315 6.9e-46 188.0 172 61.6
FAN08G0881 Fragaria x ananassa HOM05D005354 ORTHO05D006315 9.0e-46 187.6 172 60.5
ECA240G4831 Erigeron canadensis HOM05D005354 ORTHO05D006315 2.6e-45 186.0 171 59.6
FAN18G2353 Fragaria x ananassa HOM05D005354 ORTHO05D006315 3.4e-45 185.7 172 59.9
Duzib084G0473 Durio zibethinus HOM05D005354 ORTHO05D006315 5.9e-45 184.9 172 59.9
Gohir.D03G162600 Gossypium hirsutum HOM05D005354 ORTHO05D006315 1.3e-44 183.7 172 59.3
Atru.chr9.1319 Acer truncatum HOM05D005354 ORTHO05D006315 2.9e-44 182.6 174 59.8
Gohir.A03G008300 Gossypium hirsutum HOM05D005354 ORTHO05D006315 2.9e-44 182.6 172 58.7
HPP92_015107 Vanilla planifolia HOM05D005354 ORTHO05D006315 5.0e-44 181.8 171 57.9
HPP92_015115 Vanilla planifolia HOM05D005354 ORTHO05D006315 5.0e-44 181.8 171 57.9
Gorai.003G171200 Gossypium raimondii HOM05D005354 ORTHO05D006315 6.5e-44 181.4 176 58.0
Zm00001eb043970 Zea mays HOM05D005354 ORTHO05D006315 1.1e-43 180.6 171 57.3
Zm00001eb442210 Zea mays HOM05D005354 ORTHO05D006315 1.1e-43 180.6 171 57.3
Lj2A217G28 Lonicera japonica HOM05D005354 ORTHO05D006315 1.6e-42 176.8 171 60.8
SHI35069 Sapria himalayana HOM05D005354 ORTHO05D006315 1.8e-41 173.3 171 55.6
Glyma.11G032400 Glycine max HOM05D005354 ORTHO05D006315 2.4e-38 162.9 143 60.1
Pp3c26_4130 Physcomitrium patens HOM05D005354 ORTHO05D006315 7.7e-37 157.9 174 50.6
Mapoly0099s0041 Marchantia polymorpha HOM05D005354 ORTHO05D006315 1.0e-36 157.5 175 49.7
Pp3c3_14420 Physcomitrium patens HOM05D005354 ORTHO05D006315 1.1e-32 144.1 174 47.1
Actinidia05204 Actinidia chinensis HOM05D005354 ORTHO05D006315 1.1e-30 137.5 102 67.6
Ca_24575_v3 Cicer arietinum L. HOM05D005354 ORTHO05D006315 4.1e-30 135.6 157 52.9
SMO172G0088 Selaginella moellendorffii HOM05D005354 ORTHO05D006315 1.9e-27 126.7 172 41.3
Prupe.5G069100 Prunus persica HOM05D005354 ORTHO05D006315 1.6e-26 123.6 181 46.4
CDE12G0753 Ceratophyllum demersum HOM05D005354 ORTHO05D006315 6.7e-25 118.2 101 59.4
Zm00001eb442460 Zea mays HOM05D005354 ORTHO05D006315 3.8e-20 102.4 131 45.8
SMO172G0123 Selaginella moellendorffii HOM05D005354 ORTHO05D006315 1.1e-19 100.9 160 36.2
Pp3c26_4030 Physcomitrium patens HOM05D005354 ORTHO05D006315 6.7e-17 91.7 102 48.0
CDE12G0157 Ceratophyllum demersum HOM05D005354 ORTHO05D006315 1.8e-14 83.6 64 62.5
CBR_g27963 Chara braunii HOM05D005354 ORTHO05D006315 8.5e-12 74.7 187 29.9
HanXRQChr11g0324981 Helianthus annuus HOM05D005354 ORTHO05D006315 1.7e-07 60.5 63 60.3
BcaB08g34772 Brassica carinata HOM05D001035 ORTHO05D006315 1.1e-06 57.8 64 54.7
HPP92_015036 Vanilla planifolia HOM05D005354 ORTHO05D006315 1.8e-06 57.0 54 59.3


User provided reference genes

Program Settings