Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 6.8e-61 237.3 131 100.0
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 3.7e-51 204.9 122 88.5
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 3.6e-46 188.3 122 82.0
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 1.8e-45 186.0 122 81.1
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 6.8e-45 184.1 122 82.0
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.2e-44 183.3 122 77.9
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.5e-44 183.0 122 77.9
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 2.0e-44 182.6 122 77.9
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 3.4e-44 181.8 122 78.7
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 4.4e-44 181.4 120 78.3
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 4.4e-44 181.4 120 78.3
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 4.4e-44 181.4 120 80.8
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 7.6e-44 180.6 122 79.5
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 7.6e-44 180.6 122 78.7
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.3e-43 179.9 120 77.5
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 1.3e-43 179.9 120 79.2
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 1.3e-43 179.9 120 79.2
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 1.3e-43 179.9 122 76.2
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 1.7e-43 179.5 122 77.0
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 1.7e-43 179.5 120 78.3
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 2.2e-43 179.1 122 77.0
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 4.9e-43 177.9 122 77.0
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 4.9e-43 177.9 122 77.9
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 6.4e-43 177.6 122 77.9
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 1.1e-42 176.8 121 76.0
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 1.1e-42 176.8 120 78.3
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.4e-42 176.4 120 77.5
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 1.9e-42 176.0 119 79.8
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.9e-42 176.0 120 77.5
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 1.9e-42 176.0 120 78.3
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.9e-42 176.0 120 78.3
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 1.9e-42 176.0 120 77.5
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 3.2e-42 175.3 126 73.8
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 3.2e-42 175.3 126 73.8
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 3.2e-42 175.3 120 76.7
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 3.2e-42 175.3 120 76.7
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 3.2e-42 175.3 120 76.7
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 5.4e-42 174.5 120 75.8
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 5.4e-42 174.5 121 76.9
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 7.1e-42 174.1 120 75.0
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 7.1e-42 174.1 120 76.7
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 7.1e-42 174.1 120 76.7
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 9.3e-42 173.7 120 76.7
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 9.3e-42 173.7 120 76.7
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 9.3e-42 173.7 120 76.7
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 9.3e-42 173.7 120 76.7
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 9.3e-42 173.7 122 75.4
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 1.2e-41 173.3 109 84.4
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.6e-41 172.9 120 76.7
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 1.6e-41 172.9 120 75.8
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 2.1e-41 172.6 120 75.8
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 2.1e-41 172.6 115 80.9
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 2.7e-41 172.2 120 74.2
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 2.7e-41 172.2 120 75.0
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 2.7e-41 172.2 120 75.8
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 3.5e-41 171.8 120 75.0
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 3.5e-41 171.8 121 75.2
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 3.5e-41 171.8 120 75.0
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 4.6e-41 171.4 120 75.0
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 4.6e-41 171.4 120 75.8
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 6.0e-41 171.0 113 78.8
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 7.8e-41 170.6 122 76.2
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 7.8e-41 170.6 120 76.7
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 7.8e-41 170.6 120 75.8
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 1.0e-40 170.2 120 74.2
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 1.0e-40 170.2 120 75.8
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 1.3e-40 169.9 120 75.0
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 1.7e-40 169.5 120 73.3
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 2.3e-40 169.1 120 75.0
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 3.0e-40 168.7 120 75.0
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 5.1e-40 167.9 120 73.3
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 1.9e-39 166.0 120 74.2
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 2.5e-39 165.6 122 73.0
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 2.5e-39 165.6 120 73.3
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 3.3e-39 165.2 122 72.1
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 2.1e-38 162.5 120 72.5
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 3.6e-38 161.8 120 70.8
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 3.6e-38 161.8 120 71.7
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 4.8e-38 161.4 120 70.8
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 8.1e-38 160.6 120 70.8
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 8.1e-38 160.6 120 70.8
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 1.4e-37 159.8 120 70.8
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 3.1e-37 158.7 120 70.0
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 4.0e-37 158.3 121 71.1
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 4.0e-37 158.3 120 70.0
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 4.0e-37 158.3 120 70.8
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 1.2e-36 156.8 138 65.9
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 1.5e-36 156.4 120 68.3
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 3.4e-36 155.2 120 69.2
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 4.4e-36 154.8 170 55.9
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 5.8e-36 154.5 121 69.4
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 7.6e-36 154.1 117 70.1
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 1.3e-35 153.3 120 69.2
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 1.3e-35 153.3 120 69.2
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 2.2e-35 152.5 116 70.7
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 2.2e-35 152.5 116 70.7
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 2.9e-35 152.1 117 69.2
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 3.8e-35 151.8 118 69.5
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 3.8e-35 151.8 116 69.8
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 4.9e-35 151.4 132 63.6
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 6.4e-35 151.0 119 63.9
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 6.4e-35 151.0 115 70.4
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 8.4e-35 150.6 116 69.8
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 8.4e-35 150.6 116 69.8
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 3.2e-34 148.7 148 60.1
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 1.2e-33 146.7 120 66.7
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 3.5e-33 145.2 119 66.4
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 5.1e-32 141.4 104 70.2
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 5.1e-32 141.4 115 62.6
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 6.6e-32 141.0 91 79.1
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 8.7e-32 140.6 120 67.5
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 2.5e-31 139.0 94 78.7
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 4.3e-31 138.3 91 78.0
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 1.4e-29 133.3 94 73.4
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 2.0e-28 129.4 101 66.3
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 5.5e-26 121.3 91 70.3
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 2.1e-22 109.4 68 80.9
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 2.8e-22 109.0 126 54.8
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 1.2e-20 103.6 69 76.8
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 1.6e-17 93.2 64 73.4
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 4.8e-14 81.6 52 86.5
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.1e-13 80.5 46 80.4
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 5.3e-13 78.2 58 72.4
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 4.6e-09 65.1 52 69.2
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 1.9e-07 59.7 51 64.7
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.5e-07 59.3 37 73.0


User provided reference genes

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