Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3788 Utricularia gibba HOM05D006032 ORTHO05D007544 9.1e-77 290.0 134 100.0
MSTRG.20857 Avicennia marina HOM05D006032 ORTHO05D007544 1.9e-13 79.7 102 48.0
SalBow3G2277 Salvia bowleyana HOM05D006032 ORTHO05D007544 2.4e-13 79.3 102 48.0
Oeu054338.1 Olea europaea HOM05D006032 ORTHO05D007544 7.8e-12 74.3 102 44.1
CAN.G1091.3 Capsicum annuum HOM05D006032 ORTHO05D007544 1.3e-11 73.6 102 45.1
Sopen09g002430 Solanum pennellii HOM05D006032 ORTHO05D007544 1.7e-11 73.2 102 45.1
Cc02_g38440 Coffea canephora HOM05D006032 ORTHO05D007544 2.3e-11 72.8 102 44.1
Migut.B01790 Erythranthe guttata HOM05D006032 ORTHO05D007544 2.3e-11 72.8 102 45.1
PGSC0003DMG400001748 Solanum tuberosum HOM05D006032 ORTHO05D007544 2.3e-11 72.8 102 45.1
unitig_22.g5344 Utricularia gibba HOM05D003213 ORTHO05D003693 3.0e-11 72.4 102 45.1
Nitab4.5_0002682g0080 Nicotiana tabacum HOM05D006032 ORTHO05D007544 5.1e-11 71.6 102 44.1
Nitab4.5_0006802g0050 Nicotiana tabacum HOM05D006032 ORTHO05D007544 5.1e-11 71.6 102 44.1
Peaxi162Scf00815g00338 Petunia axillaris HOM05D006032 ORTHO05D007544 5.1e-11 71.6 102 44.1
DCAR_006944 Daucus carota HOM05D006032 ORTHO05D007544 6.6e-11 71.2 102 43.1
HanXRQChr06g0170291 Helianthus annuus HOM05D006032 ORTHO05D007544 8.6e-11 70.9 138 35.5
Hma1.2p1_2961F.1_g330870 Hydrangea macrophylla HOM05D006032 ORTHO05D007544 1.9e-10 69.7 102 41.2
ClCG05G001320 Citrullus lanatus HOM05D006032 ORTHO05D007544 5.6e-10 68.2 102 42.2
COL.COLO4_12764 Corchorus olitorius HOM05D006032 ORTHO05D007544 7.3e-10 67.8 102 42.2
ECA236G4677 Erigeron canadensis HOM05D006032 ORTHO05D007544 9.6e-10 67.4 102 41.2
Eucgr.D02319 Eucalyptus grandis HOM05D006032 ORTHO05D007544 9.6e-10 67.4 102 43.1
PGR031G1164 Punica granatum HOM05D006032 ORTHO05D007544 9.6e-10 67.4 102 42.2
Gohir.A07G140700 Gossypium hirsutum HOM05D006032 ORTHO05D007544 1.2e-09 67.0 102 42.2
Gohir.D07G146100 Gossypium hirsutum HOM05D006032 ORTHO05D007544 1.2e-09 67.0 102 42.2
Gorai.001G158300 Gossypium raimondii HOM05D006032 ORTHO05D007544 1.2e-09 67.0 102 42.2
Sed0022476 Sechium edule HOM05D006032 ORTHO05D007544 1.2e-09 67.0 102 42.2
Lsat_1_v5_gn_7_3801 Lactuca sativa HOM05D006032 ORTHO05D007544 1.6e-09 66.6 102 40.2
MELO3C006088.2 Cucumis melo HOM05D006032 ORTHO05D007544 2.1e-09 66.2 102 41.2
CSS0027447 Camellia sinensis var. sinensis HOM05D006032 ORTHO05D007544 2.8e-09 65.9 102 41.2
Cpa.g.sc184.23 Carica papaya HOM05D006032 ORTHO05D007544 3.6e-09 65.5 102 41.2
Thecc.01G353900 Theobroma cacao HOM05D006032 ORTHO05D007544 3.6e-09 65.5 102 40.2
CsaV3_3G008690 Cucumis sativus L. HOM05D006032 ORTHO05D007544 6.2e-09 64.7 102 40.2
Dinv32511 Davidia involucrata HOM05D006032 ORTHO05D007544 8.1e-09 64.3 75 46.7
Lj7A509T108 Lonicera japonica HOM05D006032 ORTHO05D007544 8.1e-09 64.3 102 38.2
QL04p055082 Quercus lobata HOM05D006032 ORTHO05D007544 1.4e-08 63.5 102 39.2
Atru.chr5.551 Acer truncatum HOM05D006032 ORTHO05D007544 1.8e-08 63.2 102 38.2
CANSAT56G0440 Cannabis sativa HOM05D006032 ORTHO05D007544 1.8e-08 63.2 102 41.2
Cfa003882 Carpinus fangiana HOM05D006032 ORTHO05D007544 2.4e-08 62.8 102 39.2
TWI59G0434 Tripterygium wilfordii HOM05D006032 ORTHO05D007544 2.4e-08 62.8 102 39.2
TAR629G0912 Trochodendron aralioides HOM05D006032 ORTHO05D007544 2.4e-08 62.8 102 38.2
Haze_15552 Corylus avellana HOM05D006032 ORTHO05D007544 3.1e-08 62.4 102 39.2
Ciclev10021696m.g Citrus clementina HOM05D006032 ORTHO05D007544 4.0e-08 62.0 102 37.3
CiPaw.01G065600 Carya illinoinensis HOM05D006032 ORTHO05D007544 5.2e-08 61.6 102 39.2
Manes.01G253200 Manihot esculenta HOM05D006032 ORTHO05D007544 6.8e-08 61.2 102 37.3
arahy.Tifrunner.gnm1.ann1.S0M071 Arachis hypogaea HOM05D006032 ORTHO05D007544 8.9e-08 60.8 102 38.2
arahy.Tifrunner.gnm1.ann1.XQ5AKE Arachis hypogaea HOM05D006032 ORTHO05D007544 8.9e-08 60.8 102 38.2
Potri.002G154600 Populus trichocarpa HOM05D006032 ORTHO05D007544 8.9e-08 60.8 102 38.2
Prupe.2G175800 Prunus persica HOM05D006032 ORTHO05D007544 1.2e-07 60.5 102 42.2
Sabra02G0122600 Salix brachista HOM05D006032 ORTHO05D007544 1.2e-07 60.5 102 38.2
Nn1g01650 Nelumbo nucifera HOM05D006032 ORTHO05D007544 1.5e-07 60.1 102 36.3
Phvul.008G059200 Phaseolus vulgaris HOM05D006032 ORTHO05D007544 1.5e-07 60.1 102 38.2
THA.LOC104817034 Tarenaya hassleriana HOM05D006032 ORTHO05D007544 1.5e-07 60.1 102 38.2
VMungo1383G0296 Vigna mungo HOM05D006032 ORTHO05D007544 1.5e-07 60.1 102 38.2
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 2.0e-07 59.7 113 35.4
Lj4g0026145 Lotus japonicus HOM05D006032 ORTHO05D007544 2.0e-07 59.7 102 38.2
GSVIVG01027006001 Vitis vinifera HOM05D006032 ORTHO05D007544 2.0e-07 59.7 102 36.3
FvH4_7g15110 Fragaria vesca HOM05D006032 ORTHO05D007544 2.6e-07 59.3 102 41.2
FAN03G1341 Fragaria x ananassa HOM05D006032 ORTHO05D007544 2.6e-07 59.3 102 41.2
FAN06G2046 Fragaria x ananassa HOM05D006032 ORTHO05D007544 2.6e-07 59.3 102 41.2
FAN06G3864 Fragaria x ananassa HOM05D006032 ORTHO05D007544 2.6e-07 59.3 102 41.2
FAN10G0977 Fragaria x ananassa HOM05D006032 ORTHO05D007544 2.6e-07 59.3 102 41.2
FAN10G2244 Fragaria x ananassa HOM05D006032 ORTHO05D007544 2.6e-07 59.3 102 41.2
MD01G1069800 Malus domestica HOM05D006032 ORTHO05D007544 2.6e-07 59.3 102 41.2
MD07G1132700 Malus domestica HOM05D006032 ORTHO05D007544 2.6e-07 59.3 102 41.2
RcHm_v2.0_Chr1g0357301 Rosa chinensis HOM05D006032 ORTHO05D007544 2.6e-07 59.3 102 41.2
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 3.4e-07 58.9 102 36.3
CDE04G3178 Ceratophyllum demersum HOM05D006032 ORTHO05D007544 3.4e-07 58.9 102 36.3
Glyma.09G255500 Glycine max HOM05D006032 ORTHO05D007544 3.4e-07 58.9 102 38.2
Glyma.18G237400 Glycine max HOM05D006032 ORTHO05D007544 3.4e-07 58.9 102 38.2
Lalb_Chr19g0126911 Lupinus albus HOM05D006032 ORTHO05D007544 3.4e-07 58.9 102 37.3
Aqoxy7G00233 Aquilegia oxysepala HOM05D006032 ORTHO05D007544 4.4e-07 58.5 113 33.6
Potri.014G089100 Populus trichocarpa HOM05D006032 ORTHO05D007544 7.6e-07 57.8 102 36.3
CDE12G0723 Ceratophyllum demersum HOM05D006032 ORTHO05D007544 1.3e-06 57.0 102 35.3
PSO478G3538 Papaver somniferum HOM05D006032 ORTHO05D007544 1.3e-06 57.0 102 37.3
PSO782G5129 Papaver somniferum HOM05D006032 ORTHO05D007544 1.3e-06 57.0 102 37.3
SGA_v2.0_scaffold95G28814 Striga asiatica HOM05D006032 ORTHO05D007544 1.3e-06 57.0 115 36.5
MSTRG.17292 Avicennia marina HOM05D006032 ORTHO05D007544 1.7e-06 56.6 100 42.0
Carub.0006s3637 Capsella rubella HOM05D006032 ORTHO05D007544 1.7e-06 56.6 113 33.6
Thhalv10028885m.g Eutrema salsugineum HOM05D006032 ORTHO05D007544 1.7e-06 56.6 113 33.6
BcaB01g02152 Brassica carinata HOM05D006032 ORTHO05D007544 2.2e-06 56.2 113 33.6
BcaB01g02282 Brassica carinata HOM05D006032 ORTHO05D007544 2.2e-06 56.2 113 33.6
BcaC01g06855 Brassica carinata HOM05D006032 ORTHO05D007544 2.2e-06 56.2 113 33.6
BcaC04g24141 Brassica carinata HOM05D006032 ORTHO05D007544 2.2e-06 56.2 113 33.6
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 2.2e-06 56.2 113 33.6
C03p38990 Brassica napus HOM05D006032 ORTHO05D007544 2.2e-06 56.2 113 33.6
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 2.2e-06 56.2 113 33.6
BolC3t16171H Brassica oleracea HOM05D006032 ORTHO05D007544 2.2e-06 56.2 113 33.6
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 2.2e-06 56.2 113 33.6
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 2.2e-06 56.2 113 33.6
Rhsim12G0138500 Rhododendron simsii HOM05D006032 ORTHO05D007544 2.2e-06 56.2 64 45.3
Sp6g00830 Schrenkiella parvula HOM05D006032 ORTHO05D007544 2.2e-06 56.2 113 33.6
AL6G52090 Arabidopsis lyrata HOM05D006032 ORTHO05D007544 4.9e-06 55.1 113 33.6
AT4G01310 Arabidopsis thaliana HOM05D006032 ORTHO05D007544 4.9e-06 55.1 113 33.6
ATR0661G584 Amborella trichopoda HOM05D006032 ORTHO05D007544 6.4e-06 54.7 102 35.3
EL10Ac1g00366 Beta vulgaris HOM05D006032 ORTHO05D007544 6.4e-06 54.7 102 34.3
AUR62004402 Chenopodium quinoa HOM05D006032 ORTHO05D007544 8.4e-06 54.3 102 33.3
Sc01g0003280 Simmondsia chinensis HOM05D006032 ORTHO05D007544 8.4e-06 54.3 104 34.6


User provided reference genes

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