Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3735 Utricularia gibba HOM05D003718 ORTHO05D004402 0.0e+00 1214.5 633 100.0
unitig_22.g5287 Utricularia gibba HOM05D003718 ORTHO05D004402 1.7e-282 975.7 663 79.0
MSTRG.21485 Avicennia marina HOM05D003718 ORTHO05D004402 3.7e-229 798.5 651 64.4
Migut.D00439 Erythranthe guttata HOM05D003718 ORTHO05D004402 3.1e-228 795.4 651 63.7
SalBow4G0483 Salvia bowleyana HOM05D003718 ORTHO05D004402 1.2e-219 766.9 670 62.4
Dinv34637 Davidia involucrata HOM05D003718 ORTHO05D004402 1.1e-212 743.8 652 60.9
SGA_v2.0_scaffold1G00624 Striga asiatica HOM05D003718 ORTHO05D004402 1.1e-212 743.8 631 62.3
Solyc05g046330.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 1.1e-209 733.8 653 59.6
Oeu052043.2 Olea europaea HOM05D003718 ORTHO05D004402 1.6e-208 729.9 763 53.6
Sopen05g027610 Solanum pennellii HOM05D003718 ORTHO05D004402 2.1e-208 729.6 653 59.3
SGA_v2.0_scaffold138G35211 Striga asiatica HOM05D003718 ORTHO05D004402 2.1e-208 729.6 744 55.1
Nitab4.5_0001572g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 4.7e-208 728.4 631 59.6
Sopen07g005600 Solanum pennellii HOM05D003718 ORTHO05D004402 6.8e-207 724.5 652 58.1
Actinidia07305 Actinidia chinensis HOM05D003718 ORTHO05D004402 4.4e-206 721.8 652 59.8
Solyc07g014700.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 4.4e-206 721.8 654 57.6
vmacro14814 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 5.8e-206 721.5 652 59.8
CSS0049010 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 1.3e-205 720.3 652 60.0
Cc01_g18200 Coffea canephora HOM05D003718 ORTHO05D004402 2.2e-205 719.5 655 58.3
CSS0040480 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 3.7e-205 718.8 652 60.0
Peaxi162Scf00320g00717 Petunia axillaris HOM05D003718 ORTHO05D004402 3.7e-205 718.8 649 58.4
Cfa013046 Carpinus fangiana HOM05D003718 ORTHO05D004402 2.4e-204 716.1 652 58.6
Nitab4.5_0000413g0180 Nicotiana tabacum HOM05D003718 ORTHO05D004402 7.0e-204 714.5 631 59.4
CAN.G106.18 Capsicum annuum HOM05D003718 ORTHO05D004402 5.0e-202 708.4 651 58.4
Duzib211G0290 Durio zibethinus HOM05D003718 ORTHO05D004402 1.2e-200 703.7 652 56.6
QL09p039591 Quercus lobata HOM05D003718 ORTHO05D004402 1.6e-200 703.4 671 55.7
Potri.002G036600 Populus trichocarpa HOM05D003718 ORTHO05D004402 3.6e-200 702.2 651 56.8
CiPaw.04G187700 Carya illinoinensis HOM05D003718 ORTHO05D004402 8.1e-200 701.0 649 57.5
Gohir.D07G156100 Gossypium hirsutum HOM05D003718 ORTHO05D004402 1.4e-199 700.3 652 57.2
CiPaw.03G266000 Carya illinoinensis HOM05D003718 ORTHO05D004402 1.2e-198 697.2 652 56.9
Gorai.001G179000 Gossypium raimondii HOM05D003718 ORTHO05D004402 2.0e-198 696.4 652 56.9
CAN.G54.7 Capsicum annuum HOM05D003718 ORTHO05D004402 3.4e-198 695.7 652 55.7
GSVIVG01028357001 Vitis vinifera HOM05D003718 ORTHO05D004402 5.8e-198 694.9 652 57.1
Thecc.01G255900 Theobroma cacao HOM05D003718 ORTHO05D004402 1.7e-197 693.3 652 56.7
Atru.chr5.1725 Acer truncatum HOM05D003718 ORTHO05D004402 2.2e-197 693.0 653 56.4
Manes.12G033700 Manihot esculenta HOM05D003718 ORTHO05D004402 2.2e-197 693.0 652 57.1
HanXRQChr04g0110491 Helianthus annuus HOM05D003718 ORTHO05D004402 3.7e-197 692.2 649 56.2
Gohir.A07G149800 Gossypium hirsutum HOM05D003718 ORTHO05D004402 4.9e-197 691.8 652 56.9
TWI12G1081 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 8.3e-197 691.0 652 56.3
Duzib133G1085 Durio zibethinus HOM05D003718 ORTHO05D004402 1.9e-196 689.9 652 56.3
TWI75G1389 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 3.2e-196 689.1 653 55.7
Hma1.2p1_0273F.1_g109540 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 1.6e-195 686.8 653 57.9
TAR633G0796 Trochodendron aralioides HOM05D003718 ORTHO05D004402 4.6e-195 685.3 653 56.2
Duzib138G1036 Durio zibethinus HOM05D003718 ORTHO05D004402 7.8e-195 684.5 652 56.3
TAR362G0778 Trochodendron aralioides HOM05D003718 ORTHO05D004402 1.0e-194 684.1 655 56.5
Potri.005G226100 Populus trichocarpa HOM05D003718 ORTHO05D004402 1.3e-194 683.7 652 56.1
DCAR_000921 Daucus carota HOM05D003718 ORTHO05D004402 2.3e-194 682.9 652 55.4
Sabra02G0029600 Salix brachista HOM05D003718 ORTHO05D004402 2.3e-194 682.9 684 53.8
CANSAT01G0671 Cannabis sativa HOM05D003718 ORTHO05D004402 1.1e-193 680.6 652 56.3
Manes.13G035300 Manihot esculenta HOM05D003718 ORTHO05D004402 3.3e-193 679.1 652 56.4
Ciclev10019124m.g Citrus clementina HOM05D003718 ORTHO05D004402 1.6e-192 676.8 653 54.8
MD10G1181500 Malus domestica HOM05D003718 ORTHO05D004402 1.6e-192 676.8 658 55.8
CsaV3_1G015830 Cucumis sativus L. HOM05D003718 ORTHO05D004402 6.2e-192 674.9 655 54.8
MELO3C025537.2 Cucumis melo HOM05D003718 ORTHO05D004402 1.5e-190 670.2 655 55.0
Lsat_1_v5_gn_8_92540 Lactuca sativa HOM05D003718 ORTHO05D004402 2.0e-190 669.8 629 56.4
MD05G1194900 Malus domestica HOM05D003718 ORTHO05D004402 4.4e-190 668.7 657 54.8
ECA236G3831 Erigeron canadensis HOM05D003718 ORTHO05D004402 5.8e-190 668.3 651 54.5
Nn1g02814 Nelumbo nucifera HOM05D003718 ORTHO05D004402 7.6e-190 667.9 654 54.7
Prupe.8G221600 Prunus persica HOM05D003718 ORTHO05D004402 4.9e-189 665.2 652 54.6
Rhsim01G0262400 Rhododendron simsii HOM05D003718 ORTHO05D004402 4.9e-189 665.2 609 58.8
Eucgr.K03255 Eucalyptus grandis HOM05D003718 ORTHO05D004402 6.4e-189 664.8 653 55.0
FvH4_2g21250 Fragaria vesca HOM05D003718 ORTHO05D004402 8.4e-189 664.5 652 54.8
RcHm_v2.0_Chr6g0287811 Rosa chinensis HOM05D003718 ORTHO05D004402 8.4e-189 664.5 651 55.0
Sabra05G0174600 Salix brachista HOM05D003718 ORTHO05D004402 8.4e-189 664.5 676 54.1
Gohir.D11G137575 Gossypium hirsutum HOM05D003718 ORTHO05D004402 4.1e-188 662.1 652 55.2
Gorai.007G147600 Gossypium raimondii HOM05D003718 ORTHO05D004402 4.1e-188 662.1 652 55.1
FAN15G3248 Fragaria x ananassa HOM05D003718 ORTHO05D004402 7.1e-188 661.4 651 54.5
Aqoxy1G01842 Aquilegia oxysepala HOM05D003718 ORTHO05D004402 9.2e-188 661.0 653 53.9
Gohir.A11G131600 Gossypium hirsutum HOM05D003718 ORTHO05D004402 9.2e-188 661.0 654 54.9
Sed0001928 Sechium edule HOM05D003718 ORTHO05D004402 9.2e-188 661.0 655 53.9
Glyma.03G164400 Glycine max HOM05D003718 ORTHO05D004402 1.6e-187 660.2 652 54.0
FAN24G2691 Fragaria x ananassa HOM05D003718 ORTHO05D004402 1.3e-186 657.1 651 54.5
Lj5g0026512 Lotus japonicus HOM05D003718 ORTHO05D004402 1.9e-185 653.3 653 54.7
Glyma.19G165800 Glycine max HOM05D003718 ORTHO05D004402 1.6e-184 650.2 653 53.3
Glyma.10G038000 Glycine max HOM05D003718 ORTHO05D004402 1.4e-183 647.1 654 53.4
Ca_09672_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 1.8e-183 646.7 654 53.1
ClCG03G002590 Citrullus lanatus HOM05D003718 ORTHO05D004402 1.8e-183 646.7 635 55.1
FAN27G0576 Fragaria x ananassa HOM05D003718 ORTHO05D004402 4.0e-183 645.6 684 51.9
Nn3g19693 Nelumbo nucifera HOM05D003718 ORTHO05D004402 7.6e-182 641.3 653 53.3
VMungo0720G0687 Vigna mungo HOM05D003718 ORTHO05D004402 9.9e-182 641.0 654 54.0
Phvul.001G162000 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 1.3e-181 640.6 653 52.5
AUR62013766 Chenopodium quinoa HOM05D003718 ORTHO05D004402 1.7e-181 640.2 637 54.2
Phvul.007G191800 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 6.4e-181 638.3 654 53.5
AL7G32970 Arabidopsis lyrata HOM05D003718 ORTHO05D004402 8.4e-181 637.9 652 53.5
THA.LOC104812416 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 1.1e-180 637.5 652 52.8
Psat6g054080 Pisum sativum HOM05D003718 ORTHO05D004402 1.4e-180 637.1 652 52.6
Medtr1g069780 Medicago truncatula HOM05D003718 ORTHO05D004402 1.9e-180 636.7 652 51.7
VMungo1383G2169 Vigna mungo HOM05D003718 ORTHO05D004402 3.2e-180 636.0 653 52.2
THA.LOC104806254 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 4.2e-180 635.6 652 52.5
arahy.Tifrunner.gnm1.ann1.QXN52H Arachis hypogaea HOM05D003718 ORTHO05D004402 2.1e-179 633.3 666 52.3
Lalb_Chr02g0152551 Lupinus albus HOM05D003718 ORTHO05D004402 2.1e-179 633.3 652 52.3
arahy.Tifrunner.gnm1.ann1.FU7SP6 Arachis hypogaea HOM05D003718 ORTHO05D004402 4.6e-179 632.1 666 52.1
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 4.6e-179 632.1 643 54.6
PGR031G0689 Punica granatum HOM05D003718 ORTHO05D004402 1.7e-178 630.2 651 52.4
TPR.G5874 Trifolium pratense HOM05D003718 ORTHO05D004402 3.9e-178 629.0 654 52.1
AT4G21150 Arabidopsis thaliana HOM05D003718 ORTHO05D004402 5.1e-178 628.6 652 52.5
Carub.0007s2028 Capsella rubella HOM05D003718 ORTHO05D004402 2.5e-177 626.3 652 52.8
Peaxi162Scf00906g00225 Petunia axillaris HOM05D003718 ORTHO05D004402 5.6e-177 625.2 677 52.0
Lalb_Chr21g0313961 Lupinus albus HOM05D003718 ORTHO05D004402 2.1e-176 623.2 652 52.0
PSO210G5136 Papaver somniferum HOM05D003718 ORTHO05D004402 2.1e-176 623.2 654 52.9
ATR0736G006 Amborella trichopoda HOM05D003718 ORTHO05D004402 1.1e-175 620.9 651 51.3
CARHR227730 Cardamine hirsuta HOM05D003718 ORTHO05D004402 1.8e-175 620.2 652 52.3
Lsat_1_v5_gn_5_182920 Lactuca sativa HOM05D003718 ORTHO05D004402 2.4e-175 619.8 653 51.6
Sp7g19230 Schrenkiella parvula HOM05D003718 ORTHO05D004402 2.4e-175 619.8 652 52.6
Thhalv10024580m.g Eutrema salsugineum HOM05D003718 ORTHO05D004402 9.0e-175 617.8 652 51.8
PSO832G2930 Papaver somniferum HOM05D003718 ORTHO05D004402 2.6e-174 616.3 654 52.6
EL10Ac1g00739 Beta vulgaris HOM05D003718 ORTHO05D004402 8.4e-173 611.3 633 51.7
BcaC09g51252 Brassica carinata HOM05D003718 ORTHO05D004402 2.3e-170 603.2 652 51.1
BolC1t01458H Brassica oleracea HOM05D003718 ORTHO05D004402 8.7e-170 601.3 652 51.1
Nitab4.5_0005411g0050 Nicotiana tabacum HOM05D003718 ORTHO05D004402 2.5e-169 599.7 586 53.9
Rhsim13G0036100 Rhododendron simsii HOM05D003718 ORTHO05D004402 3.3e-169 599.4 566 57.2
CDE07G1087 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 1.6e-168 597.0 652 50.0
BcaNung03839 Brassica carinata HOM05D003718 ORTHO05D004402 1.4e-167 594.0 628 51.9
BraA03t14340Z Brassica rapa HOM05D003718 ORTHO05D004402 3.4e-166 589.3 669 50.7
AUR62023389 Chenopodium quinoa HOM05D003718 ORTHO05D004402 3.4e-166 589.3 617 52.4
CDE04G2599 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 1.3e-165 587.4 652 49.7
arahy.Tifrunner.gnm1.ann1.EWE7BX Arachis hypogaea HOM05D003718 ORTHO05D004402 2.9e-165 586.3 689 47.6
Hund17111 Selenicereus undatus HOM05D003718 ORTHO05D004402 3.8e-165 585.9 624 49.8
arahy.Tifrunner.gnm1.ann1.B1YDGW Arachis hypogaea HOM05D003718 ORTHO05D004402 8.4e-165 584.7 690 47.8
Aa31LG6G3160 Aethionema arabicum HOM05D003718 ORTHO05D004402 9.3e-164 581.3 600 51.8
Zm00001eb143710 Zea mays HOM05D003718 ORTHO05D004402 3.5e-163 579.3 638 47.8
Psat3g056400 Pisum sativum HOM05D003718 ORTHO05D004402 4.6e-163 578.9 653 49.9
Os01g0911200 Oryza sativa ssp. japonica HOM05D003718 ORTHO05D004402 2.3e-162 576.6 640 47.8
TPR.G9204 Trifolium pratense HOM05D003718 ORTHO05D004402 2.5e-161 573.2 672 48.4
Sc02g0003190 Simmondsia chinensis HOM05D003718 ORTHO05D004402 4.3e-161 572.4 567 53.1
HPP92_000351 Vanilla planifolia HOM05D003718 ORTHO05D004402 3.7e-160 569.3 624 49.2
Zm00001eb365020 Zea mays HOM05D003718 ORTHO05D004402 6.2e-160 568.5 638 47.6
COL.COLO4_04023 Corchorus olitorius HOM05D003718 ORTHO05D004402 2.6e-158 563.1 583 52.7
BraA01t01195Z Brassica rapa HOM05D003718 ORTHO05D004402 1.0e-157 561.2 609 49.8
C01p15100 Brassica napus HOM05D003718 ORTHO05D004402 1.3e-157 560.8 608 49.8
A01p12510 Brassica napus HOM05D003718 ORTHO05D004402 4.9e-157 558.9 609 49.4
Ca_08683_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 2.1e-155 553.5 652 47.7
C07p51100 Brassica napus HOM05D003718 ORTHO05D004402 6.0e-155 552.0 617 49.9
BolC7t45610H Brassica oleracea HOM05D003718 ORTHO05D004402 6.0e-155 552.0 617 49.9
A03p52670 Brassica napus HOM05D003718 ORTHO05D004402 2.3e-154 550.1 656 48.2
BolC3t20629H Brassica oleracea HOM05D003718 ORTHO05D004402 1.8e-151 540.4 691 46.2
C03p83480 Brassica napus HOM05D003718 ORTHO05D004402 4.5e-142 509.2 693 43.9
Nitab4.5_0005095g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 3.2e-140 503.1 482 55.4
BcaC01g00710 Brassica carinata HOM05D003718 ORTHO05D004402 2.5e-132 476.9 556 50.0
Ah.05g177770 Amaranthus hybridus HOM05D003718 ORTHO05D004402 4.5e-126 456.1 490 48.6
Cpa.g.sc20.44 Carica papaya HOM05D003718 ORTHO05D004402 2.8e-112 410.2 654 39.3
Mapoly0028s0115 Marchantia polymorpha HOM05D003718 ORTHO05D004402 1.9e-108 397.5 655 37.9
Actinidia37517 Actinidia chinensis HOM05D003718 ORTHO05D004402 6.8e-106 389.0 515 46.0
CsaV3_UNG055470 Cucumis sativus L. HOM05D003718 ORTHO05D004402 1.1e-92 345.1 433 46.9
AUR62043414 Chenopodium quinoa HOM05D003718 ORTHO05D004402 5.4e-87 326.2 353 53.0
HanXRQChr11g0336771 Helianthus annuus HOM05D003718 ORTHO05D004402 1.7e-80 304.7 377 46.2
SEGI_27157 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 1.1e-79 302.0 369 46.6
Psat0ss9065g0080 Pisum sativum HOM05D003718 ORTHO05D004402 3.5e-78 297.0 386 42.5
FAN20G1425 Fragaria x ananassa HOM05D003718 ORTHO05D004402 6.2e-75 286.2 261 56.3
vmacro02673 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 5.2e-74 283.1 330 52.4
Haze_21407 Corylus avellana HOM05D003718 ORTHO05D004402 1.6e-67 261.5 259 52.1
EL10Ac1g02094 Beta vulgaris HOM05D003718 ORTHO05D004402 1.2e-65 255.4 314 46.2
AagrBONN_evm.TU.Sc2ySwM_340.234 Anthoceros agrestis HOM05D003718 ORTHO05D004402 4.2e-63 246.9 421 39.0
A08p15230 Brassica napus HOM05D003718 ORTHO05D001664 3.0e-61 240.7 515 33.8
CBR_g32152 Chara braunii HOM05D003718 ORTHO05D004402 6.9e-50 203.0 610 29.5
Actinidia09536 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.2e-46 192.2 261 44.1
Pp3c7_6480 Physcomitrium patens HOM05D003718 ORTHO05D004402 1.6e-43 181.8 393 34.6
Actinidia09538 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.1e-42 179.1 162 62.3
Psat7g093680 Pisum sativum HOM05D003718 ORTHO05D004402 9.0e-42 176.0 295 37.6
Hma1.2p1_0576F.1_g181950 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 2.2e-40 171.4 312 39.4
HPP92_000418 Vanilla planifolia HOM05D003718 ORTHO05D004402 6.3e-35 153.3 589 23.9
SEGI_31370 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 1.2e-30 139.0 187 42.8
FAN27G1677 Fragaria x ananassa HOM05D003718 ORTHO05D004402 1.7e-24 118.6 179 39.7
arahy.Tifrunner.gnm1.ann1.6B4W14 Arachis hypogaea HOM05D003718 ORTHO05D004402 2.9e-24 117.9 78 71.8
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 1.1e-23 115.9 84 65.5
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 1.4e-23 115.5 84 65.5
Psat6g086960 Pisum sativum HOM05D003718 ORTHO05D004402 1.4e-23 115.5 96 58.3
SHI09762 Sapria himalayana HOM05D003718 ORTHO05D004402 1.8e-21 108.6 147 45.6
SMO367G0218 Selaginella moellendorffii HOM05D003718 ORTHO05D004402 5.1e-21 107.1 139 44.6
CsaV3_UNG055460 Cucumis sativus L. HOM05D003718 ORTHO05D004402 7.4e-20 103.2 149 40.9
Actinidia25800 Actinidia chinensis HOM05D003718 ORTHO05D004402 2.8e-19 101.3 194 36.1
arahy.Tifrunner.gnm1.ann1.S1G2KX Arachis hypogaea HOM05D003718 ORTHO05D004402 1.8e-18 98.6 114 46.5
Lsat_1_v5_gn_4_881 Lactuca sativa HOM05D003718 ORTHO05D004402 2.9e-16 91.3 161 34.8
Actinidia09537 Actinidia chinensis HOM05D003718 ORTHO05D004402 3.0e-13 81.3 152 36.8
Psat6g087000 Pisum sativum HOM05D003718 ORTHO05D004402 5.2e-13 80.5 67 59.7
Cre08.g368450 Chlamydomonas reinhardtii HOM05D003718 ORTHO05D004402 1.5e-12 79.0 163 35.0
Lsat_1_v5_gn_3_107020 Lactuca sativa HOM05D003718 ORTHO05D004402 2.6e-12 78.2 120 40.8
Actinidia30157 Actinidia chinensis HOM05D003718 ORTHO05D057597 1.3e-11 75.9 82 48.8
Actinidia25801 Actinidia chinensis HOM05D003718 ORTHO05D004402 4.1e-10 70.9 118 41.5
Actinidia30158 Actinidia chinensis HOM05D003718 ORTHO05D004402 7.7e-09 66.6 89 42.7
Gohir.A01G185580 Gossypium hirsutum HOM05D003718 ORTHO05D000087 1.9e-07 62.0 49 59.2
Lsat_1_v5_gn_9_27880 Lactuca sativa HOM05D003718 ORTHO05D004402 1.6e-06 58.9 176 27.3


User provided reference genes

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