Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 2.9e-48 194.9 98 100.0
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 4.5e-33 144.4 100 76.0
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 5.5e-31 137.5 101 70.3
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 1.4e-29 132.9 99 70.7
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 1.4e-29 132.9 103 70.9
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 1.8e-29 132.5 101 66.3
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 3.9e-29 131.3 104 68.3
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 5.1e-29 131.0 99 69.7
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 6.7e-29 130.6 101 70.3
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 1.1e-28 129.8 102 65.7
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 1.5e-28 129.4 104 65.4
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 1.5e-28 129.4 102 67.6
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 2.0e-28 129.0 100 70.0
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 2.0e-28 129.0 100 70.0
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 2.0e-28 129.0 104 66.3
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 2.6e-28 128.6 99 68.7
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 4.4e-28 127.9 97 68.0
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 5.7e-28 127.5 100 69.0
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 5.7e-28 127.5 100 69.0
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 7.4e-28 127.1 102 67.6
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 9.7e-28 126.7 106 63.2
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 1.3e-27 126.3 99 67.7
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 2.2e-27 125.6 101 68.3
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 2.8e-27 125.2 101 67.3
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 2.8e-27 125.2 104 66.3
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 2.8e-27 125.2 106 64.2
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 3.7e-27 124.8 101 66.3
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 3.7e-27 124.8 103 65.0
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 4.8e-27 124.4 98 67.3
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 6.3e-27 124.0 99 64.6
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 6.3e-27 124.0 98 67.3
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 8.2e-27 123.6 99 63.6
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 8.2e-27 123.6 104 64.4
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.1e-26 123.2 101 66.3
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 1.1e-26 123.2 99 65.7
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 1.4e-26 122.9 98 67.3
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 1.4e-26 122.9 105 62.9
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 1.8e-26 122.5 99 62.6
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 1.8e-26 122.5 99 62.6
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 1.8e-26 122.5 96 65.6
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 1.8e-26 122.5 99 65.7
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 1.8e-26 122.5 98 66.3
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 1.8e-26 122.5 101 68.3
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 1.8e-26 122.5 104 61.5
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 1.8e-26 122.5 104 62.5
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 2.4e-26 122.1 99 62.6
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 2.4e-26 122.1 104 62.5
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 2.4e-26 122.1 100 64.0
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 2.4e-26 122.1 96 65.6
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 2.4e-26 122.1 104 63.5
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 3.1e-26 121.7 98 64.3
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 3.1e-26 121.7 104 63.5
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 3.1e-26 121.7 106 63.2
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 3.1e-26 121.7 99 65.7
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 3.1e-26 121.7 99 62.6
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 3.1e-26 121.7 101 63.4
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 4.1e-26 121.3 94 66.0
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 5.3e-26 120.9 94 68.1
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 5.3e-26 120.9 99 62.6
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 5.3e-26 120.9 104 63.5
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 5.3e-26 120.9 99 62.6
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 7.0e-26 120.6 101 64.4
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 7.0e-26 120.6 99 62.6
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 7.0e-26 120.6 99 65.7
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 7.0e-26 120.6 100 63.0
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 9.1e-26 120.2 94 64.9
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 9.1e-26 120.2 94 64.9
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 9.1e-26 120.2 99 62.6
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 9.1e-26 120.2 104 61.5
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 1.2e-25 119.8 106 59.4
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.2e-25 119.8 98 65.3
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 1.2e-25 119.8 108 58.3
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 1.5e-25 119.4 105 64.8
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 1.5e-25 119.4 105 64.8
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 2.0e-25 119.0 94 64.9
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.0e-25 119.0 98 63.3
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 2.0e-25 119.0 103 62.1
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 2.0e-25 119.0 99 64.6
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 2.0e-25 119.0 106 60.4
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 2.6e-25 118.6 102 61.8
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 3.5e-25 118.2 94 62.8
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 3.5e-25 118.2 106 59.4
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 3.5e-25 118.2 104 58.7
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 3.5e-25 118.2 101 60.4
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 4.5e-25 117.9 101 61.4
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 4.5e-25 117.9 94 63.8
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 4.5e-25 117.9 94 63.8
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 4.5e-25 117.9 94 63.8
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 4.5e-25 117.9 101 60.4
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 4.5e-25 117.9 104 61.5
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 5.9e-25 117.5 96 62.5
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 5.9e-25 117.5 101 61.4
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 5.9e-25 117.5 102 60.8
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 5.9e-25 117.5 99 59.6
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 7.7e-25 117.1 101 61.4
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 1.0e-24 116.7 101 61.4
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 1.0e-24 116.7 105 60.0
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.7e-24 115.9 103 60.2
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.2e-24 115.5 95 65.3
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 2.2e-24 115.5 101 59.4
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 2.9e-24 115.2 104 57.7
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 3.8e-24 114.8 99 62.6
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 5.0e-24 114.4 99 59.6
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 6.5e-24 114.0 97 63.9
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 6.5e-24 114.0 128 53.9
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 8.5e-24 113.6 103 58.3
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 2.5e-23 112.1 101 60.4
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 3.2e-23 111.7 98 61.2
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 3.2e-23 111.7 103 56.3
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 4.2e-23 111.3 101 58.4
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 4.2e-23 111.3 100 62.0
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 5.5e-23 110.9 102 56.9
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 9.4e-23 110.2 97 60.8
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 9.4e-23 110.2 103 55.3
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 1.2e-22 109.8 122 54.1
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 1.2e-22 109.8 100 60.0
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 1.6e-22 109.4 97 60.8
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 1.0e-21 106.7 102 55.9
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 2.6e-20 102.1 104 52.9
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 4.8e-19 97.8 78 64.1
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 2.4e-18 95.5 101 50.5
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 3.1e-18 95.1 59 78.0
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 3.1e-18 95.1 56 80.4
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 1.2e-14 83.2 102 44.1
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 3.6e-14 81.6 96 46.9
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 1.3e-11 73.2 100 43.0
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 8.3e-11 70.5 65 53.8
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 2.9e-08 62.0 91 46.2
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 8.5e-08 60.5 65 47.7
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.1e-07 60.1 58 51.7
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 9.4e-07 57.0 103 35.0
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 8.0e-06 53.9 81 40.7
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 8.0e-06 53.9 68 41.2


User provided reference genes

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