Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3679 Utricularia gibba HOM05D004451 ORTHO05D005177 2.6e-156 555.4 303 100.0
unitig_22.g5194 Utricularia gibba HOM05D004451 ORTHO05D005177 1.4e-101 373.6 305 73.4
Oeu018597.1 Olea europaea HOM05D004451 ORTHO05D005177 1.2e-68 264.2 310 54.5
SGA_v2.0_scaffold32G13039 Striga asiatica HOM05D004451 ORTHO05D005177 1.6e-68 263.8 310 55.2
Oeu010397.1 Olea europaea HOM05D004451 ORTHO05D005177 2.7e-68 263.1 310 53.9
SalBow6G6827 Salvia bowleyana HOM05D004451 ORTHO05D005177 4.6e-68 262.3 304 53.6
MSTRG.16716 Avicennia marina HOM05D004451 ORTHO05D005177 1.5e-66 257.3 307 52.8
MSTRG.20184 Avicennia marina HOM05D004451 ORTHO05D005177 2.5e-66 256.5 302 54.6
Migut.B00385 Erythranthe guttata HOM05D004451 ORTHO05D005177 4.3e-66 255.8 313 52.1
Rhsim05G0088400 Rhododendron simsii HOM05D004451 ORTHO05D005177 4.7e-65 252.3 313 54.6
Actinidia00412 Actinidia chinensis HOM05D004451 ORTHO05D005177 2.4e-64 250.0 308 54.2
CSS0019678 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 3.1e-64 249.6 322 51.9
DCAR_001641 Daucus carota HOM05D004451 ORTHO05D005177 1.2e-63 247.7 192 70.8
Actinidia17478 Actinidia chinensis HOM05D004451 ORTHO05D005177 1.5e-63 247.3 309 53.1
Cc02_g19230 Coffea canephora HOM05D004451 ORTHO05D005177 2.6e-63 246.5 311 53.7
CDE04G0259 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 3.4e-63 246.1 182 70.9
Hma1.2p1_0796F.1_g219180 Hydrangea macrophylla HOM05D004451 ORTHO05D005177 4.4e-63 245.7 192 69.8
Psat6g219200 Pisum sativum HOM05D004451 ORTHO05D005177 5.8e-63 245.4 192 68.8
Atru.chr5.2587 Acer truncatum HOM05D004451 ORTHO05D005177 7.6e-63 245.0 192 69.8
Lj9C321G12 Lonicera japonica HOM05D004451 ORTHO05D005177 9.9e-63 244.6 192 69.8
AUR62039084 Chenopodium quinoa HOM05D004451 ORTHO05D005177 1.3e-62 244.2 191 69.6
QL11p033916 Quercus lobata HOM05D004451 ORTHO05D005177 1.7e-62 243.8 191 68.6
THA.LOC104819557 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 2.2e-62 243.4 301 52.2
COL.COLO4_32599 Corchorus olitorius HOM05D004451 ORTHO05D005177 3.8e-62 242.7 192 68.8
Thecc.02G107400 Theobroma cacao HOM05D004451 ORTHO05D005177 3.8e-62 242.7 192 67.2
vmacro19448 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 6.4e-62 241.9 318 49.4
Medtr1g107450 Medicago truncatula HOM05D004451 ORTHO05D005177 8.4e-62 241.5 192 67.7
CiPaw.06G169600 Carya illinoinensis HOM05D004451 ORTHO05D005177 1.1e-61 241.1 192 69.3
Gohir.D13G042200 Gossypium hirsutum HOM05D004451 ORTHO05D005177 1.1e-61 241.1 308 50.6
Lalb_Chr02g0145321 Lupinus albus HOM05D004451 ORTHO05D005177 1.1e-61 241.1 181 69.1
Ciclev10029016m.g Citrus clementina HOM05D004451 ORTHO05D005177 1.4e-61 240.7 306 51.6
Rhsim11G0160300 Rhododendron simsii HOM05D004451 ORTHO05D005177 1.4e-61 240.7 192 68.2
CANSAT25G0591 Cannabis sativa HOM05D004451 ORTHO05D005177 1.9e-61 240.4 242 57.9
CANSAT25G2876 Cannabis sativa HOM05D004451 ORTHO05D005177 1.9e-61 240.4 242 57.9
PGR142G3187 Punica granatum HOM05D004451 ORTHO05D005177 1.9e-61 240.4 192 67.2
Ca_11078_v3 Cicer arietinum L. HOM05D004451 ORTHO05D005177 2.4e-61 240.0 192 66.1
Gorai.013G047100 Gossypium raimondii HOM05D004451 ORTHO05D005177 2.4e-61 240.0 309 50.8
HanXRQChr16g0514851 Helianthus annuus HOM05D004451 ORTHO05D005177 3.2e-61 239.6 182 70.3
Sed0001090 Sechium edule HOM05D004451 ORTHO05D005177 3.2e-61 239.6 322 52.2
Hund06320 Selenicereus undatus HOM05D004451 ORTHO05D005177 3.2e-61 239.6 314 49.4
Duzib248G1610 Durio zibethinus HOM05D004451 ORTHO05D005177 4.1e-61 239.2 192 66.7
Gorai.005G235200 Gossypium raimondii HOM05D004451 ORTHO05D005177 4.1e-61 239.2 192 67.2
Cpa.g.sc106.89 Carica papaya HOM05D004451 ORTHO05D005177 5.4e-61 238.8 250 56.4
Gohir.A13G043700 Gossypium hirsutum HOM05D004451 ORTHO05D005177 5.4e-61 238.8 310 50.3
Gohir.D02G207300 Gossypium hirsutum HOM05D004451 ORTHO05D005177 5.4e-61 238.8 192 67.2
GSVIVG01003161001 Vitis vinifera HOM05D004451 ORTHO05D005177 5.4e-61 238.8 192 66.1
Gohir.A03G186500 Gossypium hirsutum HOM05D004451 ORTHO05D005177 7.1e-61 238.4 192 67.2
AUR62010302 Chenopodium quinoa HOM05D004451 ORTHO05D005177 9.2e-61 238.0 199 67.3
Haze_10166 Corylus avellana HOM05D004451 ORTHO05D005177 9.2e-61 238.0 225 59.1
CiPaw.05G011200 Carya illinoinensis HOM05D004451 ORTHO05D005177 1.2e-60 237.7 221 61.1
Cfa004574 Carpinus fangiana HOM05D004451 ORTHO05D005177 1.6e-60 237.3 225 59.1
Lsat_1_v5_gn_5_114881 Lactuca sativa HOM05D004451 ORTHO05D005177 1.6e-60 237.3 187 66.8
Nitab4.5_0002815g0090 Nicotiana tabacum HOM05D004451 ORTHO05D005177 1.6e-60 237.3 191 67.5
Peaxi162Scf00016g02324 Petunia axillaris HOM05D004451 ORTHO05D005177 1.6e-60 237.3 225 62.2
Phvul.007G040300 Phaseolus vulgaris HOM05D004451 ORTHO05D005177 1.6e-60 237.3 192 66.1
arahy.Tifrunner.gnm1.ann1.BMM90D Arachis hypogaea HOM05D004451 ORTHO05D005177 2.1e-60 236.9 310 51.0
Sed0013348 Sechium edule HOM05D004451 ORTHO05D005177 2.1e-60 236.9 317 50.5
TWI79G0876 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 2.1e-60 236.9 260 55.4
Sopen01g049830 Solanum pennellii HOM05D004451 ORTHO05D005177 2.7e-60 236.5 191 66.5
CSS0044080 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 3.5e-60 236.1 315 50.2
Aa31LG8G13140 Aethionema arabicum HOM05D004451 ORTHO05D005177 4.6e-60 235.7 182 69.8
arahy.Tifrunner.gnm1.ann1.S5NBXN Arachis hypogaea HOM05D004451 ORTHO05D005177 4.6e-60 235.7 310 50.6
PGSC0003DMG400025865 Solanum tuberosum HOM05D004451 ORTHO05D005177 4.6e-60 235.7 191 66.5
TWI31G0226 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 4.6e-60 235.7 192 66.7
Glyma.20G129100 Glycine max HOM05D004451 ORTHO05D005177 6.0e-60 235.3 314 49.0
Manes.07G069100 Manihot esculenta HOM05D004451 ORTHO05D005177 6.0e-60 235.3 314 50.6
Solyc01g107640.3 Solanum lycopersicum HOM05D004451 ORTHO05D005177 6.0e-60 235.3 306 50.0
ECA234G3549 Erigeron canadensis HOM05D004451 ORTHO05D005177 7.8e-60 235.0 310 49.7
TAR628G0195 Trochodendron aralioides HOM05D004451 ORTHO05D005177 7.8e-60 235.0 192 66.7
Aqoxy5G01146 Aquilegia oxysepala HOM05D004451 ORTHO05D005177 1.0e-59 234.6 182 67.0
ClCG02G006310 Citrullus lanatus HOM05D004451 ORTHO05D005177 1.0e-59 234.6 328 50.6
THA.LOC104807244 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 1.0e-59 234.6 184 67.4
CsaV3_7G008120 Cucumis sativus L. HOM05D004451 ORTHO05D005177 1.3e-59 234.2 320 50.3
MD10G1096700 Malus domestica HOM05D004451 ORTHO05D005177 1.3e-59 234.2 307 49.5
Hund00148 Selenicereus undatus HOM05D004451 ORTHO05D005177 1.3e-59 234.2 307 49.8
EL10Ac9g22281 Beta vulgaris HOM05D004451 ORTHO05D005177 1.7e-59 233.8 311 49.2
CSS0017890 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 1.7e-59 233.8 308 51.0
BcaB03g16278 Brassica carinata HOM05D004451 ORTHO05D005177 2.3e-59 233.4 182 68.7
BcaC06g36051 Brassica carinata HOM05D004451 ORTHO05D005177 2.3e-59 233.4 182 68.7
C07p08470 Brassica napus HOM05D004451 ORTHO05D005177 2.3e-59 233.4 182 68.7
MD05G1088600 Malus domestica HOM05D004451 ORTHO05D005177 2.3e-59 233.4 308 49.7
Nitab4.5_0005392g0030 Nicotiana tabacum HOM05D004451 ORTHO05D005177 2.3e-59 233.4 186 67.2
Potri.009G096300 Populus trichocarpa HOM05D004451 ORTHO05D005177 2.3e-59 233.4 321 48.9
Sp3g28570 Schrenkiella parvula HOM05D004451 ORTHO05D005177 2.3e-59 233.4 182 68.7
Thhalv10022775m.g Eutrema salsugineum HOM05D004451 ORTHO05D005177 3.0e-59 233.0 255 54.1
Glyma.10G261800 Glycine max HOM05D004451 ORTHO05D005177 3.0e-59 233.0 182 66.5
HanXRQChr10g0292341 Helianthus annuus HOM05D004451 ORTHO05D005177 3.0e-59 233.0 182 66.5
Lj5g0008999 Lotus japonicus HOM05D004451 ORTHO05D005177 3.0e-59 233.0 309 49.8
PSO210G2671 Papaver somniferum HOM05D004451 ORTHO05D005177 3.0e-59 233.0 306 49.0
VMungo0720G2723 Vigna mungo HOM05D004451 ORTHO05D005177 3.0e-59 233.0 300 49.7
Actinidia05493 Actinidia chinensis HOM05D004451 ORTHO05D005177 3.9e-59 232.6 215 62.3
Prupe.8G134600 Prunus persica HOM05D004451 ORTHO05D005177 5.1e-59 232.3 306 49.7
SGA_v2.0_scaffold225G43078 Striga asiatica HOM05D004451 ORTHO05D005177 5.1e-59 232.3 306 52.0
BcaB07g31794 Brassica carinata HOM05D004451 ORTHO05D005177 6.6e-59 231.9 192 67.2
A07p05320 Brassica napus HOM05D004451 ORTHO05D005177 6.6e-59 231.9 243 56.0
BolC7t41261H Brassica oleracea HOM05D004451 ORTHO05D005177 6.6e-59 231.9 246 55.7
BraA07t28325Z Brassica rapa HOM05D004451 ORTHO05D005177 6.6e-59 231.9 243 56.0
CARHR105660 Cardamine hirsuta HOM05D004451 ORTHO05D005177 6.6e-59 231.9 182 68.7
Lalb_Chr06g0165471 Lupinus albus HOM05D004451 ORTHO05D005177 6.6e-59 231.9 192 66.7
Potri.001G300500 Populus trichocarpa HOM05D004451 ORTHO05D005177 6.6e-59 231.9 309 49.2
A09p10690 Brassica napus HOM05D004451 ORTHO05D005177 8.7e-59 231.5 192 67.2
Carub.0003s2912 Capsella rubella HOM05D004451 ORTHO05D005177 1.1e-58 231.1 192 66.7
PSO170G0588 Papaver somniferum HOM05D004451 ORTHO05D005177 1.1e-58 231.1 306 48.7
RcHm_v2.0_Chr6g0255371 Rosa chinensis HOM05D004451 ORTHO05D005177 1.1e-58 231.1 306 50.7
TAR381G0562 Trochodendron aralioides HOM05D004451 ORTHO05D005177 1.1e-58 231.1 317 50.2
AL3G47010 Arabidopsis lyrata HOM05D004451 ORTHO05D005177 1.5e-58 230.7 192 66.1
AT2G15290 Arabidopsis thaliana HOM05D004451 ORTHO05D005177 1.5e-58 230.7 192 66.1
C09p12690 Brassica napus HOM05D004451 ORTHO05D005177 1.5e-58 230.7 192 66.7
Duzib132G0413 Durio zibethinus HOM05D004451 ORTHO05D005177 1.5e-58 230.7 182 66.5
MELO3C018494.2 Cucumis melo HOM05D004451 ORTHO05D005177 1.9e-58 230.3 320 50.0
FvH4_2g05240 Fragaria vesca HOM05D004451 ORTHO05D005177 1.9e-58 230.3 192 66.1
FAN24G2858 Fragaria x ananassa HOM05D004451 ORTHO05D005177 1.9e-58 230.3 192 66.1
BcaB08g34587 Brassica carinata HOM05D004451 ORTHO05D005177 2.5e-58 229.9 192 66.1
BolC9t54158H Brassica oleracea HOM05D004451 ORTHO05D005177 3.3e-58 229.6 192 66.1
FAN20G1574 Fragaria x ananassa HOM05D004451 ORTHO05D005177 1.6e-57 227.3 306 49.3
BcaC06g31580 Brassica carinata HOM05D004451 ORTHO05D005177 3.6e-57 226.1 192 66.7
Nn1g04705 Nelumbo nucifera HOM05D004451 ORTHO05D005177 6.2e-57 225.3 310 49.4
FAN27G3473 Fragaria x ananassa HOM05D004451 ORTHO05D005177 1.4e-56 224.2 307 49.5
Manes.10G076300 Manihot esculenta HOM05D004451 ORTHO05D005177 1.4e-56 224.2 304 47.0
Ah.01g018220 Amaranthus hybridus HOM05D004451 ORTHO05D005177 1.8e-56 223.8 313 48.2
HPP92_004770 Vanilla planifolia HOM05D004451 ORTHO05D005177 1.2e-55 221.1 182 63.2
SEGI_03021 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 2.0e-55 220.3 186 62.9
FAN15G2242 Fragaria x ananassa HOM05D004451 ORTHO05D005177 2.6e-55 219.9 319 48.0
Nn5g30419 Nelumbo nucifera HOM05D004451 ORTHO05D005177 3.4e-55 219.5 308 47.1
Zm00001eb206410 Zea mays HOM05D004451 ORTHO05D005177 5.8e-55 218.8 178 65.7
Os02g0187600 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 1.7e-54 217.2 180 66.7
Os06g0638100 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 2.1e-52 210.3 179 62.6
Zm00001eb387350 Zea mays HOM05D004451 ORTHO05D005177 2.7e-52 209.9 182 61.0
Dinv15761 Davidia involucrata HOM05D004451 ORTHO05D005177 7.8e-52 208.4 292 47.3
Pp3c10_9500 Physcomitrium patens HOM05D004451 ORTHO05D005177 2.3e-51 206.8 189 59.8
Sabra09G0074000 Salix brachista HOM05D004451 ORTHO05D005177 3.0e-51 206.5 366 41.8
Pp3c1_21740 Physcomitrium patens HOM05D004451 ORTHO05D005177 5.1e-51 205.7 181 60.2
Pp3c27_4260 Physcomitrium patens HOM05D004451 ORTHO05D005177 8.7e-51 204.9 188 59.0
Mapoly0049s0087 Marchantia polymorpha HOM05D004451 ORTHO05D005177 4.3e-50 202.6 184 60.3
ECA240G4367 Erigeron canadensis HOM05D004451 ORTHO05D005177 7.3e-50 201.8 204 57.4
Sc17g0003020 Simmondsia chinensis HOM05D004451 ORTHO05D005177 1.3e-49 201.1 166 65.1
AagrBONN_evm.TU.Sc2ySwM_344.1281 Anthoceros agrestis HOM05D004451 ORTHO05D005177 1.6e-49 200.7 184 56.5
Sabra16G0188700 Salix brachista HOM05D004451 ORTHO05D005177 1.6e-49 200.7 254 49.2
Eucgr.E02954 Eucalyptus grandis HOM05D004451 ORTHO05D005177 3.6e-49 199.5 282 48.6
DCAR_021989 Daucus carota HOM05D004451 ORTHO05D005177 6.2e-49 198.7 272 49.3
ATR0691G207 Amborella trichopoda HOM05D004451 ORTHO05D005177 2.4e-48 196.8 156 66.7
SMO118G0560 Selaginella moellendorffii HOM05D004451 ORTHO05D005177 4.0e-48 196.1 178 61.8
BraA09t36712Z Brassica rapa HOM05D004451 ORTHO05D005177 3.4e-47 193.0 256 49.2
vmacro19524 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 4.9e-46 189.1 342 40.1
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 8.4e-46 188.3 154 66.2
CBR_g39267 Chara braunii HOM05D004451 ORTHO05D005177 2.1e-44 183.7 191 51.8
SHI05289 Sapria himalayana HOM05D004451 ORTHO05D005177 2.4e-37 160.2 180 50.0
vmacro02006 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 6.2e-33 145.6 191 49.7
CDE06G1648 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 6.9e-32 142.1 108 65.7
TAR381G0937 Trochodendron aralioides HOM05D004451 ORTHO05D005177 1.8e-27 127.5 107 66.4
MCO10G127 Micromonas commoda HOM05D004451 ORTHO05D005177 1.6e-25 120.9 182 41.8
Zm00001eb234680 Zea mays HOM05D004451 ORTHO05D005177 3.8e-22 109.8 185 39.5
CAN.G1231.10 Capsicum annuum HOM05D004451 ORTHO05D005177 1.4e-21 107.8 86 65.1
PRCOL_00004645 Prasinoderma coloniale HOM05D004451 ORTHO05D005177 2.7e-20 103.6 191 36.6
Cre10.g454734 Chlamydomonas reinhardtii HOM05D000133 ORTHO05D005177 4.6e-20 102.8 184 37.0
SEGI_11302 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 6.1e-20 102.4 86 60.5
CAN.G3385.1 Capsicum annuum HOM05D004451 ORTHO05D005177 3.9e-19 99.8 67 77.6
CBR_g28861 Chara braunii HOM05D004451 ORTHO05D009492 1.8e-16 90.9 90 54.4
HPP92_008279 Vanilla planifolia HOM05D004451 ORTHO05D005177 5.9e-15 85.9 65 70.8
HanXRQChr01g0018911 Helianthus annuus HOM05D004451 ORTHO05D005177 1.2e-12 78.2 77 54.5
HanXRQChr17g0567381 Helianthus annuus HOM05D004451 ORTHO05D005177 1.2e-12 78.2 77 54.5
Cre11.g467759 Chlamydomonas reinhardtii HOM05D027551 ORTHO05D005177 1.5e-10 71.2 163 37.4
HanXRQChr05g0151971 Helianthus annuus HOM05D002664 ORTHO05D002974 2.0e-07 60.8 45 68.9


User provided reference genes

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