Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3670 Utricularia gibba HOM05D004776 ORTHO05D005777 2.7e-261 904.8 472 100.0
SGA_v2.0_scaffold116G32209 Striga asiatica HOM05D004776 ORTHO05D005777 3.2e-153 545.8 527 57.3
SalBow3G4083 Salvia bowleyana HOM05D004776 ORTHO05D005777 6.1e-152 541.6 539 56.0
MSTRG.17776 Avicennia marina HOM05D004776 ORTHO05D005777 2.6e-150 536.2 530 56.8
Oeu018486.2 Olea europaea HOM05D004776 ORTHO05D005777 2.8e-141 506.1 533 55.2
DCAR_006106 Daucus carota HOM05D004776 ORTHO05D005777 1.8e-140 503.4 420 64.3
Duzib168G1494 Durio zibethinus HOM05D004776 ORTHO05D005777 6.5e-138 495.0 456 59.6
Rhsim01G0212300 Rhododendron simsii HOM05D004776 ORTHO05D005777 1.1e-137 494.2 536 53.4
CSS0005795 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 4.7e-136 488.8 524 53.4
CSS0042525 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 6.1e-136 488.4 524 53.4
Actinidia20436 Actinidia chinensis HOM05D004776 ORTHO05D005777 2.6e-134 483.0 535 53.6
Hma1.2p1_0569F.1_g180290 Hydrangea macrophylla HOM05D004776 ORTHO05D005777 2.8e-133 479.6 524 53.8
vmacro14409 Vaccinium macrocarpon HOM05D004776 ORTHO05D005777 2.8e-133 479.6 526 53.6
Cc01_g10560 Coffea canephora HOM05D004776 ORTHO05D005777 2.4e-132 476.5 527 52.0
Glyma.13G323400 Glycine max HOM05D004776 ORTHO05D005777 1.2e-131 474.2 519 53.0
Duzib170G0082 Durio zibethinus HOM05D004776 ORTHO05D005777 2.0e-131 473.4 488 55.5
QL01p015865 Quercus lobata HOM05D004776 ORTHO05D005777 4.5e-131 472.2 527 52.9
PGSC0003DMG400007163 Solanum tuberosum HOM05D004776 ORTHO05D005777 1.7e-130 470.3 525 52.8
Lj3g0025221 Lotus japonicus HOM05D004776 ORTHO05D005777 2.3e-130 469.9 514 52.7
Ciclev10028099m.g Citrus clementina HOM05D004776 ORTHO05D005777 5.0e-130 468.8 525 52.8
CiPaw.13G118600 Carya illinoinensis HOM05D004776 ORTHO05D005777 3.3e-129 466.1 525 52.6
Solyc06g074960.4 Solanum lycopersicum HOM05D004776 ORTHO05D005777 3.3e-129 466.1 525 52.6
Thecc.09G348100 Theobroma cacao HOM05D004776 ORTHO05D005777 4.2e-129 465.7 525 51.2
Prupe.6G108100 Prunus persica HOM05D004776 ORTHO05D005777 5.5e-129 465.3 524 51.5
Medtr2g095420 Medicago truncatula HOM05D004776 ORTHO05D005777 1.6e-128 463.8 512 51.6
Lalb_Chr03g0027621 Lupinus albus HOM05D004776 ORTHO05D005777 2.8e-128 463.0 521 51.6
Gorai.013G268700 Gossypium raimondii HOM05D004776 ORTHO05D005777 4.7e-128 462.2 525 51.6
Phvul.005G131900 Phaseolus vulgaris HOM05D004776 ORTHO05D005777 8.0e-128 461.5 519 52.2
CAN.G1755.5 Capsicum annuum HOM05D004776 ORTHO05D005777 1.4e-127 460.7 524 52.3
Aqoxy2G01783 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 5.2e-127 458.8 548 50.4
Gorai.003G144600 Gossypium raimondii HOM05D004776 ORTHO05D005777 8.9e-127 458.0 525 50.3
Dinv29356 Davidia involucrata HOM05D004776 ORTHO05D006187 1.2e-126 457.6 500 52.6
FvH4_1g24650 Fragaria vesca HOM05D004776 ORTHO05D005777 1.2e-126 457.6 522 51.0
Gohir.D03G137500 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.2e-126 457.6 525 50.3
MD11G1145200 Malus domestica HOM05D004776 ORTHO05D005777 1.5e-126 457.2 519 51.3
Nn2g11574 Nelumbo nucifera HOM05D004776 ORTHO05D005777 2.0e-126 456.8 542 50.4
RcHm_v2.0_Chr2g0122071 Rosa chinensis HOM05D004776 ORTHO05D005777 3.4e-126 456.1 524 50.0
Cfa010344 Carpinus fangiana HOM05D004776 ORTHO05D005777 5.7e-126 455.3 516 51.9
Manes.04G015500 Manihot esculenta HOM05D004776 ORTHO05D005777 5.7e-126 455.3 519 52.0
VMungo1080G0818 Vigna mungo HOM05D004776 ORTHO05D006187 9.8e-126 454.5 519 51.6
TAR623G0387 Trochodendron aralioides HOM05D004776 ORTHO05D005777 4.9e-125 452.2 530 51.5
GSVIVG01031509001 Vitis vinifera HOM05D004776 ORTHO05D005777 6.3e-125 451.8 523 50.7
Potri.009G007900 Populus trichocarpa HOM05D004776 ORTHO05D005777 8.3e-125 451.4 517 52.0
FAN19G0403 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.1e-124 451.1 529 50.3
HanXRQChr11g0346181 Helianthus annuus HOM05D004776 ORTHO05D005777 1.4e-124 450.7 528 52.3
Psat0s3241g0040 Pisum sativum HOM05D004776 ORTHO05D005777 7.0e-124 448.4 512 50.6
FAN23G0844 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.0e-123 446.8 529 50.1
TPR.G11629 Trifolium pratense HOM05D004776 ORTHO05D005777 2.0e-123 446.8 513 50.1
CsaV3_1G013400 Cucumis sativus L. HOM05D004776 ORTHO05D005777 2.7e-123 446.4 524 49.8
FAN26G3463 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.7e-123 446.4 532 49.6
TWI79G1687 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 2.7e-123 446.4 527 50.3
CANSAT54G2950 Cannabis sativa HOM05D004776 ORTHO05D005777 5.9e-123 445.3 525 50.1
FAN28G2552 Fragaria x ananassa HOM05D004776 ORTHO05D005777 5.9e-123 445.3 530 49.6
Sed0027733 Sechium edule HOM05D004776 ORTHO05D005777 7.8e-123 444.9 524 49.6
Migut.N02573 Erythranthe guttata HOM05D004776 ORTHO05D005777 2.3e-122 443.4 471 53.5
TWI31G0757 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 2.3e-122 443.4 524 49.2
PSO339G3038 Papaver somniferum HOM05D004776 ORTHO05D005777 1.1e-121 441.0 529 49.3
Nitab4.5_0000106g0400 Nicotiana tabacum HOM05D004776 ORTHO05D005777 1.9e-121 440.3 529 50.5
ECA248G3913 Erigeron canadensis HOM05D004776 ORTHO05D005777 5.6e-121 438.7 534 50.0
Lj1A206T59 Lonicera japonica HOM05D004776 ORTHO05D005777 5.6e-121 438.7 418 58.4
arahy.Tifrunner.gnm1.ann1.K18VCE Arachis hypogaea HOM05D004776 ORTHO05D005777 9.5e-121 438.0 522 50.4
PSO801G0074 Papaver somniferum HOM05D004776 ORTHO05D005777 1.6e-120 437.2 528 49.2
Sabra09G0004700 Salix brachista HOM05D004776 ORTHO05D005777 2.8e-120 436.4 524 50.2
Ca_01388_v3 Cicer arietinum L. HOM05D004776 ORTHO05D006187 3.6e-120 436.0 360 63.3
arahy.Tifrunner.gnm1.ann1.69IQEU Arachis hypogaea HOM05D004776 ORTHO05D005777 6.8e-119 431.8 522 49.4
EL10Ac9g22573 Beta vulgaris HOM05D004776 ORTHO05D005777 8.9e-119 431.4 456 55.9
arahy.Tifrunner.gnm1.ann1.UZ8W9W Arachis hypogaea HOM05D004776 ORTHO05D005777 1.2e-118 431.0 522 49.6
PGR102G1642 Punica granatum HOM05D004776 ORTHO05D005777 4.4e-118 429.1 531 48.0
arahy.Tifrunner.gnm1.ann1.MGN1WG Arachis hypogaea HOM05D004776 ORTHO05D005777 5.8e-118 428.7 540 48.0
Haze_23751 Corylus avellana HOM05D004776 ORTHO05D005777 2.2e-117 426.8 329 67.5
THA.LOC104799516 Tarenaya hassleriana HOM05D004776 ORTHO05D005777 1.4e-116 424.1 524 48.7
PSO339G3219 Papaver somniferum HOM05D004776 ORTHO05D005777 2.4e-116 423.3 543 48.1
A01p26580 Brassica napus HOM05D004776 ORTHO05D005777 5.4e-116 422.2 506 49.2
COL.COLO4_34701 Corchorus olitorius HOM05D004776 ORTHO05D005777 9.2e-116 421.4 326 65.0
BolC1t03347H Brassica oleracea HOM05D004776 ORTHO05D005777 3.5e-115 419.5 523 48.6
Peaxi162Scf01159g00227 Petunia axillaris HOM05D004776 ORTHO05D005777 4.6e-115 419.1 563 46.5
Sc05g0005060 Simmondsia chinensis HOM05D004776 ORTHO05D005777 6.0e-115 418.7 323 66.9
BraA01t02588Z Brassica rapa HOM05D004776 ORTHO05D005777 1.3e-114 417.5 507 49.1
BcaC09g49697 Brassica carinata HOM05D004776 ORTHO05D005777 2.3e-114 416.8 523 48.2
ClCG03G002670 Citrullus lanatus HOM05D004776 ORTHO05D005777 3.0e-114 416.4 524 48.7
PSO063G2354 Papaver somniferum HOM05D004776 ORTHO05D005777 1.1e-113 414.5 360 61.7
AL5G23530 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 2.5e-113 413.3 524 47.9
Gohir.D13G237900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 2.5e-113 413.3 525 48.0
AUR62014926 Chenopodium quinoa HOM05D004776 ORTHO05D005777 5.6e-113 412.1 539 46.8
CARHR150930 Cardamine hirsuta HOM05D004776 ORTHO05D005777 2.8e-112 409.8 525 46.9
AT3G45040 Arabidopsis thaliana HOM05D004776 ORTHO05D005777 6.2e-112 408.7 524 47.1
BcaC02g11340 Brassica carinata HOM05D004776 ORTHO05D005777 8.0e-112 408.3 522 46.9
A05p13030 Brassica napus HOM05D004776 ORTHO05D005777 8.0e-112 408.3 523 47.2
C04p17380 Brassica napus HOM05D004776 ORTHO05D005777 1.1e-111 407.9 522 46.9
BolC4t23289H Brassica oleracea HOM05D004776 ORTHO05D005777 1.1e-111 407.9 522 46.9
HPP92_025805 Vanilla planifolia HOM05D004776 ORTHO05D005777 1.4e-111 407.5 534 46.1
BraA05t20243Z Brassica rapa HOM05D004776 ORTHO05D005777 1.8e-111 407.1 523 47.0
C01p33820 Brassica napus HOM05D004776 ORTHO05D005777 2.3e-111 406.8 548 46.2
AUR62029209 Chenopodium quinoa HOM05D004776 ORTHO05D005777 5.2e-111 405.6 539 46.2
Carub.0005s1082 Capsella rubella HOM05D004776 ORTHO05D005777 1.2e-110 404.4 524 46.6
ATR1132G031 Amborella trichopoda HOM05D004776 ORTHO05D005777 3.4e-110 402.9 541 46.0
Sp5g16230 Schrenkiella parvula HOM05D004776 ORTHO05D005777 4.9e-109 399.1 420 53.1
Eucgr.B02538 Eucalyptus grandis HOM05D004776 ORTHO05D005777 6.4e-109 398.7 415 54.5
Oeu029897.2 Olea europaea HOM05D004776 ORTHO05D005777 2.4e-108 396.7 365 60.5
Sopen06g031360 Solanum pennellii HOM05D004776 ORTHO05D005777 2.4e-108 396.7 315 66.3
BcaB05g23422 Brassica carinata HOM05D004776 ORTHO05D005777 9.2e-108 394.8 384 55.2
Gohir.A03G030900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 2.1e-107 393.7 310 63.9
Thhalv10002461m.g Eutrema salsugineum HOM05D004776 ORTHO05D005777 3.0e-106 389.8 504 47.4
MELO3C035466.2 Cucumis melo HOM05D004776 ORTHO05D005777 5.1e-106 389.0 606 43.2
Glyma.12G177300 Glycine max HOM05D004776 ORTHO05D005777 1.9e-105 387.1 478 47.9
MBI18_g10191_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 9.9e-102 374.8 296 65.9
SEGI_33157 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 3.9e-98 362.8 527 43.5
SEGI_23621 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 2.4e-95 353.6 400 49.2
Lsat_1_v5_gn_1_63021 Lactuca sativa HOM05D004776 ORTHO05D005777 6.8e-95 352.1 509 44.6
Zm00001eb232190 Zea mays HOM05D004776 ORTHO05D005777 1.2e-88 331.3 476 42.0
Actinidia14011 Actinidia chinensis HOM05D004776 ORTHO05D005777 4.0e-87 326.2 204 80.9
AL5G23500 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 2.4e-84 317.0 321 53.9
PGR094G0002 Punica granatum HOM05D004776 ORTHO05D005777 9.3e-84 315.1 203 73.9
PGR094G0004 Punica granatum HOM05D004776 ORTHO05D005777 9.3e-84 315.1 203 73.9
Manes.11G150502 Manihot esculenta HOM05D004776 ORTHO05D005777 1.6e-83 314.3 483 43.7
Nitab4.5_0006015g0020 Nicotiana tabacum HOM05D004776 ORTHO05D005777 1.0e-82 311.6 468 46.6
Aqoxy3G00574 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 2.5e-81 307.0 223 69.5
Actinidia03704 Actinidia chinensis HOM05D004776 ORTHO05D005777 1.7e-69 267.7 153 85.6
BcaNung05690 Brassica carinata HOM05D004776 ORTHO05D005777 6.4e-69 265.8 295 53.2
MBI18_g43296_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 8.4e-69 265.4 244 57.8
Mapoly0124s0030 Marchantia polymorpha HOM05D004776 ORTHO05D005777 3.2e-60 236.9 367 40.1
BcaNung05691 Brassica carinata HOM05D004776 ORTHO05D005777 4.8e-56 223.0 364 40.4
Hund01475 Selenicereus undatus HOM05D004776 ORTHO05D005777 3.4e-54 216.9 401 38.9
Pp3c13_8200 Physcomitrium patens HOM05D004776 ORTHO05D005777 4.5e-54 216.5 272 42.3
Atru.chr3.3552 Acer truncatum HOM05D004776 ORTHO05D005777 6.5e-53 212.6 120 85.0
Cpa.g.sc1.24 Carica papaya HOM05D004776 ORTHO05D005777 3.8e-45 186.8 407 36.1
Atru.chr3.3553 Acer truncatum HOM05D004776 ORTHO05D005777 6.5e-45 186.0 270 43.3
Aa31LG4G14110 Aethionema arabicum HOM05D004776 ORTHO05D005777 4.7e-43 179.9 104 82.7
CBR_g19018 Chara braunii HOM05D000019 ORTHO05D000002 6.7e-42 176.0 225 44.0
Gohir.1Z049525 Gossypium hirsutum HOM05D004776 ORTHO05D005777 7.4e-41 172.6 104 83.7
Gohir.A13G232250 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.8e-39 167.9 104 80.8
Cpa.g.sc1.25 Carica papaya HOM05D004776 ORTHO05D005777 3.5e-38 163.7 95 84.2
CDE06G1539 Ceratophyllum demersum HOM05D004776 ORTHO05D005777 1.0e-37 162.2 189 51.9
FAN27G1933 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.9e-36 157.9 94 83.0
MD00G1033900 Malus domestica HOM05D004776 ORTHO05D005777 1.0e-34 152.1 361 33.2
Actinidia03705 Actinidia chinensis HOM05D004776 ORTHO05D005777 2.3e-34 151.0 334 35.6
AagrBONN_evm.TU.Sc2ySwM_228.5408 Anthoceros agrestis HOM05D004776 ORTHO05D005777 2.4e-31 141.0 242 33.9
MD03G1126100 Malus domestica HOM05D004776 ORTHO05D005777 9.1e-31 139.0 141 55.3
MBI18_g20776_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 1.1e-28 132.1 373 35.9
Cfa026928 Carpinus fangiana HOM05D004776 ORTHO05D005777 2.1e-19 101.3 198 33.8
MCO11G119 Micromonas commoda HOM05D004776 ORTHO05D005777 4.7e-19 100.1 209 34.0
FAN07G0780 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.1e-15 89.0 61 73.8
Gohir.A03G030950 Gossypium hirsutum HOM05D004776 ORTHO05D005777 2.4e-15 87.8 86 59.3
FAN10G3619 Fragaria x ananassa HOM05D004776 ORTHO05D005777 3.1e-15 87.4 51 84.3
Atru.chr3.3551 Acer truncatum HOM05D004776 ORTHO05D005777 4.1e-15 87.0 45 88.9
Cre06.g277700 Chlamydomonas reinhardtii HOM05D004776 ORTHO05D005777 7.0e-15 86.3 200 31.5
FAN05G3839 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.7e-14 84.3 51 82.4
Ca_01994_v3 Cicer arietinum L. HOM05D004776 ORTHO05D005777 2.8e-11 74.3 136 41.2
MD00G1165500 Malus domestica HOM05D004776 ORTHO05D005777 1.0e-10 72.4 81 50.6
MD00G1033800 Malus domestica HOM05D004776 ORTHO05D005777 8.9e-10 69.3 43 72.1
Os02g0146500 Oryza sativa ssp. japonica HOM05D004776 ORTHO05D005777 9.8e-09 65.9 89 47.2
PRCOL_00000088 Prasinoderma coloniale HOM05D004776 ORTHO05D005777 1.2e-06 58.9 175 28.6


User provided reference genes

Program Settings