Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 1.2e-222 776.2 398 100.0
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 2.3e-120 436.4 441 60.5
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 3.8e-115 419.1 442 60.0
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 1.9e-101 373.6 447 54.1
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 2.7e-100 369.8 406 56.4
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 3.5e-100 369.4 458 52.8
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.0e-99 367.9 468 52.1
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 2.8e-97 359.8 457 52.7
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 1.2e-95 354.4 428 54.7
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 2.0e-95 353.6 446 53.4
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 3.4e-95 352.8 442 52.7
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 6.4e-94 348.6 442 50.5
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 5.4e-93 345.5 377 57.6
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 7.1e-93 345.1 436 52.5
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.2e-92 344.4 375 58.4
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 7.8e-92 341.7 381 57.2
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.0e-91 341.3 375 58.1
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 1.7e-91 340.5 373 56.0
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 3.0e-91 339.7 417 54.2
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 5.1e-91 339.0 451 49.4
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 1.9e-90 337.0 467 51.0
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 2.5e-90 336.7 391 55.0
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 2.5e-90 336.7 383 55.9
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 7.3e-90 335.1 435 52.0
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 1.2e-89 334.3 391 55.8
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 3.6e-89 332.8 460 49.1
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 3.6e-89 332.8 385 55.6
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 3.6e-89 332.8 388 55.4
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 4.7e-89 332.4 435 51.7
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 4.7e-89 332.4 455 50.5
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 6.2e-89 332.0 442 50.0
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 2.3e-88 330.1 357 57.4
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 5.2e-88 328.9 367 57.5
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 6.8e-88 328.6 359 56.8
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 6.8e-88 328.6 374 54.5
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 6.8e-88 328.6 371 56.1
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 1.2e-87 327.8 371 54.4
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 1.5e-87 327.4 440 50.7
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.6e-87 326.6 366 55.2
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 2.6e-87 326.6 361 57.6
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 2.6e-87 326.6 444 50.5
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 4.4e-87 325.9 456 49.1
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 1.3e-86 324.3 365 56.4
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 2.2e-86 323.6 376 54.3
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 4.9e-86 322.4 481 46.6
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 6.4e-86 322.0 363 56.5
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.9e-85 320.5 443 49.0
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 2.4e-85 320.1 369 52.8
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 4.1e-85 319.3 372 53.2
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 5.4e-85 318.9 391 52.2
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 7.1e-85 318.5 367 55.0
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 1.6e-84 317.4 447 49.7
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 4.6e-84 315.8 378 53.7
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 6.0e-84 315.5 457 48.4
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 6.0e-84 315.5 367 54.2
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 7.8e-84 315.1 412 52.4
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 6.6e-83 312.0 391 51.7
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 8.6e-83 311.6 404 51.0
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 1.5e-82 310.8 445 50.1
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 1.2e-81 307.8 398 50.5
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 1.1e-80 304.7 457 47.5
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 1.8e-80 303.9 449 46.5
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 1.2e-79 301.2 360 54.7
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 1.5e-79 300.8 275 63.3
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 2.0e-79 300.4 376 51.9
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.3e-78 297.7 448 45.8
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 3.8e-78 296.2 467 45.8
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 4.9e-78 295.8 513 44.2
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 1.9e-77 293.9 402 48.0
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 3.2e-77 293.1 447 47.4
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 9.3e-77 291.6 300 59.0
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 2.1e-76 290.4 406 47.3
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 2.7e-76 290.0 462 45.5
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 1.1e-74 284.6 397 48.4
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 1.5e-74 284.3 471 44.6
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 1.5e-74 284.3 471 44.6
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 7.3e-74 282.0 459 44.4
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 7.3e-74 282.0 397 48.1
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 2.1e-73 280.4 368 48.1
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 3.1e-72 276.6 409 46.9
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 6.9e-72 275.4 462 43.7
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 5.8e-71 272.3 303 55.1
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 1.3e-70 271.2 363 51.0
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 1.7e-70 270.8 299 55.9
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 2.9e-70 270.0 361 53.5
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 8.4e-70 268.5 446 41.9
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 7.1e-69 265.4 415 44.8
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 1.0e-67 261.5 329 50.8
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 1.1e-66 258.1 413 43.8
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 1.5e-66 257.7 385 44.2
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 7.3e-66 255.4 352 47.7
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 1.3e-65 254.6 459 42.5
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 2.8e-65 253.4 417 44.1
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 4.8e-65 252.7 408 44.1
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 6.2e-65 252.3 348 48.0
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.4e-64 251.1 385 44.7
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 1.8e-64 250.8 294 55.1
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 9.0e-64 248.4 459 42.3
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 1.2e-63 248.1 408 44.1
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 5.8e-63 245.7 361 47.4
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 7.6e-63 245.4 434 43.1
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 9.9e-63 245.0 391 44.5
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.3e-62 244.6 361 47.4
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 5.5e-61 239.2 389 43.4
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 7.1e-61 238.8 318 49.1
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 1.6e-60 237.7 356 44.7
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 5.6e-58 229.2 265 52.8
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 4.5e-55 219.5 623 34.5
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.2e-54 217.2 561 34.2
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.2e-54 217.2 561 34.2
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 6.0e-52 209.1 308 46.8
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 5.1e-51 206.1 367 41.1
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 2.1e-49 200.7 212 53.8
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 2.1e-49 200.7 437 36.8
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 3.1e-48 196.8 401 37.7
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 4.5e-47 193.0 297 44.8
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.2e-46 190.7 197 54.8
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 1.1e-45 188.3 449 37.2
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 4.2e-45 186.4 479 33.8
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 5.7e-42 176.0 307 45.0
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 1.2e-39 168.3 284 41.9
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 7.2e-37 159.1 309 44.0
Gohir.A07G173560 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.6e-36 157.9 116 72.4
HanXRQChr02g0036561 Helianthus annuus HOM05D004969 ORTHO05D006085 7.9e-36 155.6 400 37.0
HanXRQChr02g0036751 Helianthus annuus HOM05D004969 ORTHO05D006085 9.7e-34 148.7 282 40.1
TPR.G14671 Trifolium pratense HOM05D004969 ORTHO05D006085 1.1e-29 135.2 70 90.0
Cre12.g508000 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 9.4e-29 132.1 156 41.7
CDE07G1829 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 4.7e-28 129.8 67 92.5
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 2.6e-26 124.0 302 35.4
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 2.5e-21 107.5 399 32.8
MCO11G221 Micromonas commoda HOM05D004969 ORTHO05D006085 7.2e-21 105.9 260 30.4
Sabra04G0057900 Salix brachista HOM05D004969 ORTHO05D006085 1.1e-18 98.6 251 37.8
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 2.0e-18 97.8 149 45.6
Hund16636 Selenicereus undatus HOM05D004969 ORTHO05D006085 4.8e-17 93.2 105 57.1
Hund31138 Selenicereus undatus HOM05D004969 ORTHO05D006085 6.3e-17 92.8 105 57.1
FAN15G1524 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.8e-16 91.3 57 78.9
AUR62004590 Chenopodium quinoa HOM05D004969 ORTHO05D006085 2.0e-15 87.8 186 38.2
THA.LOC104802935 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 2.0e-15 87.8 256 32.8
Hund14746 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.1e-13 82.0 51 70.6
MELO3C025953.2 Cucumis melo HOM05D004969 ORTHO05D006085 1.0e-11 75.5 64 65.6
Cre12.g490650 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 8.3e-09 65.9 148 27.7
Oeu000537.1 Olea europaea HOM05D004969 ORTHO05D006085 2.4e-08 64.3 42 78.6
MELO3C033346.2 Cucumis melo HOM05D004969 ORTHO05D044988 4.1e-08 63.5 52 63.5
Gohir.A07G173840 Gossypium hirsutum HOM05D004969 ORTHO05D006085 2.2e-06 57.8 104 46.2


User provided reference genes

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