Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3637 Utricularia gibba HOM05D004131 ORTHO05D004778 1.1e-57 227.3 198 100.0
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 8.2e-50 201.1 111 91.0
GSVIVG01038193001 Vitis vinifera HOM05D004131 ORTHO05D004778 2.4e-49 199.5 111 90.1
Cfa021469 Carpinus fangiana HOM05D004131 ORTHO05D004778 4.1e-49 198.7 111 89.2
MSTRG.24561 Avicennia marina HOM05D004131 ORTHO05D004778 5.3e-49 198.4 198 83.3
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 5.3e-49 198.4 111 88.3
Potri.017G010100 Populus trichocarpa HOM05D004131 ORTHO05D004778 6.9e-49 198.0 111 88.3
Sabra07G0113200 Salix brachista HOM05D004131 ORTHO05D004778 6.9e-49 198.0 111 88.3
Sabra07G0117600 Salix brachista HOM05D004131 ORTHO05D004778 6.9e-49 198.0 111 88.3
Gorai.011G132700 Gossypium raimondii HOM05D004131 ORTHO05D004778 9.0e-49 197.6 111 89.2
Gohir.A10G146200 Gossypium hirsutum HOM05D004131 ORTHO05D004778 2.0e-48 196.4 111 88.3
Gohir.D10G120800 Gossypium hirsutum HOM05D004131 ORTHO05D004778 2.0e-48 196.4 111 88.3
Dinv18309 Davidia involucrata HOM05D004131 ORTHO05D004778 2.6e-48 196.1 111 88.3
Lalb_Chr16g0384341 Lupinus albus HOM05D004131 ORTHO05D004778 2.6e-48 196.1 198 78.3
Haze_11173 Corylus avellana HOM05D004131 ORTHO05D004778 5.9e-48 194.9 113 88.5
Haze_11178 Corylus avellana HOM05D004131 ORTHO05D004778 5.9e-48 194.9 113 88.5
Dinv33225 Davidia involucrata HOM05D004131 ORTHO05D004778 5.9e-48 194.9 198 77.8
Potri.007G139900 Populus trichocarpa HOM05D004131 ORTHO05D004778 5.9e-48 194.9 111 86.5
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 7.7e-48 194.5 111 86.5
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 1.0e-47 194.1 198 75.8
Nn7g37517 Nelumbo nucifera HOM05D004131 ORTHO05D004778 1.7e-47 193.4 113 89.4
Solyc12g019470.2 Solanum lycopersicum HOM05D004131 ORTHO05D004778 1.7e-47 193.4 109 88.1
Sopen12g009750 Solanum pennellii HOM05D004131 ORTHO05D004778 1.7e-47 193.4 109 88.1
TWI38G2196 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 1.7e-47 193.4 111 87.4
Duzib212G0438 Durio zibethinus HOM05D004131 ORTHO05D004778 2.9e-47 192.6 111 85.6
FvH4_1g00470 Fragaria vesca HOM05D004131 ORTHO05D004778 3.8e-47 192.2 111 86.5
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 5.0e-47 191.8 111 86.5
Ciclev10022332m.g Citrus clementina HOM05D004131 ORTHO05D004778 5.0e-47 191.8 111 86.5
COL.COLO4_04655 Corchorus olitorius HOM05D004131 ORTHO05D004778 1.1e-46 190.7 110 84.5
FAN28G1052 Fragaria x ananassa HOM05D004131 ORTHO05D004778 1.1e-46 190.7 111 85.6
FAN26G1335 Fragaria x ananassa HOM05D004131 ORTHO05D004778 1.4e-46 190.3 109 87.2
Manes.01G017500 Manihot esculenta HOM05D004131 ORTHO05D004778 1.4e-46 190.3 111 86.5
Nitab4.5_0000064g0030 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.4e-46 190.3 105 90.5
Nitab4.5_0005089g0010 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.4e-46 190.3 105 90.5
RcHm_v2.0_Chr2g0084981 Rosa chinensis HOM05D004131 ORTHO05D004778 1.9e-46 189.9 108 88.9
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 2.5e-46 189.5 111 85.6
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 2.5e-46 189.5 111 85.6
CAN.G448.4 Capsicum annuum HOM05D004131 ORTHO05D004778 3.2e-46 189.1 104 90.4
FAN23G0024 Fragaria x ananassa HOM05D004131 ORTHO05D004778 5.5e-46 188.3 108 87.0
MD02G1003900 Malus domestica HOM05D004131 ORTHO05D004778 5.5e-46 188.3 111 85.6
Prupe.7G267400 Prunus persica HOM05D004131 ORTHO05D004778 5.5e-46 188.3 118 83.9
Glyma.07G206100 Glycine max HOM05D004131 ORTHO05D004778 7.2e-46 188.0 111 85.6
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 7.2e-46 188.0 111 84.7
Peaxi162Scf00483g00111 Petunia axillaris HOM05D004131 ORTHO05D004778 7.2e-46 188.0 104 90.4
Actinidia18408 Actinidia chinensis HOM05D004131 ORTHO05D004778 9.4e-46 187.6 198 73.7
PSO675G2278 Papaver somniferum HOM05D004131 ORTHO05D004778 9.4e-46 187.6 112 83.0
Lsat_1_v5_gn_7_67880 Lactuca sativa HOM05D004131 ORTHO05D004778 1.2e-45 187.2 110 82.7
PGSC0003DMG400005367 Solanum tuberosum HOM05D004131 ORTHO05D004778 1.6e-45 186.8 108 86.1
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.6e-45 186.8 106 89.6
CSS0004184 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.7e-45 186.0 111 83.8
CSS0028329 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.7e-45 186.0 111 83.8
CiPaw.02G123300 Carya illinoinensis HOM05D004131 ORTHO05D004778 2.7e-45 186.0 102 89.2
MD15G1147200 Malus domestica HOM05D004131 ORTHO05D004778 2.7e-45 186.0 106 87.7
HanXRQChr02g0059071 Helianthus annuus HOM05D004131 ORTHO05D004778 3.6e-45 185.7 104 86.5
Psat7g119160 Pisum sativum HOM05D004131 ORTHO05D004778 4.6e-45 185.3 106 86.8
TPR.G23549 Trifolium pratense HOM05D004131 ORTHO05D004778 4.6e-45 185.3 106 86.8
Aqoxy2G04165 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 6.1e-45 184.9 111 82.0
CiPaw.01G198800 Carya illinoinensis HOM05D004131 ORTHO05D004778 6.1e-45 184.9 105 89.5
SalBow6G7192 Salvia bowleyana HOM05D004131 ORTHO05D004778 6.1e-45 184.9 112 85.7
Glyma.02G138900 Glycine max HOM05D004131 ORTHO05D004778 7.9e-45 184.5 111 83.8
Sabra17G0009400 Salix brachista HOM05D004131 ORTHO05D004778 7.9e-45 184.5 135 71.9
Cc03_g14990 Coffea canephora HOM05D004131 ORTHO05D004778 1.0e-44 184.1 111 82.9
Phvul.003G059400 Phaseolus vulgaris HOM05D004131 ORTHO05D004778 1.0e-44 184.1 106 85.8
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 1.4e-44 183.7 111 82.9
ATR0743G176 Amborella trichopoda HOM05D004131 ORTHO05D004778 1.8e-44 183.3 110 83.6
TAR362G1052 Trochodendron aralioides HOM05D004131 ORTHO05D004778 1.8e-44 183.3 111 83.8
ECA130G0002 Erigeron canadensis HOM05D004131 ORTHO05D004778 2.3e-44 183.0 111 80.2
Medtr4g087630 Medicago truncatula HOM05D004131 ORTHO05D004778 2.3e-44 183.0 106 84.9
PSO017G4173 Papaver somniferum HOM05D004131 ORTHO05D004778 3.0e-44 182.6 107 84.1
SalBow3G2571 Salvia bowleyana HOM05D004131 ORTHO05D004778 3.9e-44 182.2 103 88.3
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 5.1e-44 181.8 198 84.3
Actinidia28972 Actinidia chinensis HOM05D004131 ORTHO05D004778 6.7e-44 181.4 103 88.3
Ah.13g073340 Amaranthus hybridus HOM05D004131 ORTHO05D004778 6.7e-44 181.4 197 84.3
CDE08G0022 Ceratophyllum demersum HOM05D004131 ORTHO05D004778 8.8e-44 181.0 111 82.0
Lalb_Chr05g0218801 Lupinus albus HOM05D004131 ORTHO05D004778 1.1e-43 180.6 111 82.0
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.1e-43 180.6 106 85.8
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 2.0e-43 179.9 110 82.7
ECA233G3286 Erigeron canadensis HOM05D004131 ORTHO05D004778 2.5e-43 179.5 105 82.9
CANSAT56G2001 Cannabis sativa HOM05D004131 ORTHO05D004778 3.3e-43 179.1 102 86.3
Lj6C265T11 Lonicera japonica HOM05D004131 ORTHO05D004778 7.4e-43 177.9 111 81.1
MBI07_g36705_MAGBIO Magnolia biondii HOM05D004131 ORTHO05D004778 1.3e-42 177.2 107 84.1
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 1.3e-42 177.2 110 80.9
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.3e-42 177.2 105 84.8
HPP92_023727 Vanilla planifolia HOM05D004131 ORTHO05D004778 1.3e-42 177.2 110 82.7
CSS0000211 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.2e-42 176.4 103 85.4
CSS0046112 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.2e-42 176.4 103 85.4
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 2.8e-42 176.0 110 80.0
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 3.7e-42 175.6 106 81.1
Hund12374 Selenicereus undatus HOM05D004131 ORTHO05D004778 3.7e-42 175.6 198 84.3
MELO3C022231.2 Cucumis melo HOM05D004131 ORTHO05D004778 6.3e-42 174.9 112 78.6
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 8.2e-42 174.5 106 80.2
Sc13g0007290 Simmondsia chinensis HOM05D004131 ORTHO05D004778 8.2e-42 174.5 101 84.2
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 1.1e-41 174.1 106 81.1
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 1.4e-41 173.7 106 81.1
CsaV3_5G040580 Cucumis sativus L. HOM05D004131 ORTHO05D004778 1.4e-41 173.7 112 78.6
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 3.1e-41 172.6 110 78.2
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 3.1e-41 172.6 110 78.2
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 3.1e-41 172.6 110 78.2
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 4.1e-41 172.2 110 78.2
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 5.3e-41 171.8 106 80.2
Eucgr.G01598 Eucalyptus grandis HOM05D004131 ORTHO05D004778 6.9e-41 171.4 101 81.2
Eucgr.L00027 Eucalyptus grandis HOM05D004131 ORTHO05D004778 6.9e-41 171.4 101 81.2
EL10Ac3g06119 Beta vulgaris HOM05D004131 ORTHO05D004778 9.1e-41 171.0 104 79.8
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 2.6e-40 169.5 108 78.7
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 2.6e-40 169.5 108 78.7
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 2.6e-40 169.5 108 78.7
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 2.6e-40 169.5 108 78.7
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 5.9e-40 168.3 106 78.3
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea HOM05D004131 ORTHO05D004778 7.7e-40 167.9 132 70.5
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 2.9e-39 166.0 110 76.4
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 2.9e-39 166.0 110 76.4
Zm00001eb425720 Zea mays HOM05D004131 ORTHO05D004778 8.5e-39 164.5 105 79.0
Ah.07g202990 Amaranthus hybridus HOM05D004131 ORTHO05D004778 1.4e-38 163.7 102 77.5
AUR62002422 Chenopodium quinoa HOM05D004131 ORTHO05D004778 1.4e-38 163.7 112 75.0
AUR62023766 Chenopodium quinoa HOM05D004131 ORTHO05D004778 1.9e-38 163.3 108 76.9
Lju470A13T20 Lonicera japonica HOM05D004131 ORTHO05D004778 6.1e-37 158.3 188 52.1
Mapoly0055s0100 Marchantia polymorpha HOM05D004131 ORTHO05D004778 3.0e-36 156.0 113 69.0
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis HOM05D004131 ORTHO05D004778 2.6e-35 152.9 118 66.1
Pp3c3_18840 Physcomitrium patens HOM05D004131 ORTHO05D004778 3.7e-34 149.1 114 68.4
vmacro15701 Vaccinium macrocarpon HOM05D004131 ORTHO05D004778 3.7e-34 149.1 165 53.3
SMO364G0381 Selaginella moellendorffii HOM05D004131 ORTHO05D004778 5.9e-32 141.7 111 64.9
Lju470A13G17 Lonicera japonica HOM05D004131 ORTHO05D004778 1.3e-31 140.6 80 87.5
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 1.9e-30 136.7 82 82.9
Rhsim02G0086100 Rhododendron simsii HOM05D004131 ORTHO05D004778 3.2e-30 136.0 191 45.0
PGR042G3815 Punica granatum HOM05D004131 ORTHO05D004778 2.7e-29 132.9 78 83.3
Aqoxy604s001 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 3.6e-29 132.5 124 62.1
Sed0002263 Sechium edule HOM05D004131 ORTHO05D004778 1.8e-28 130.2 81 79.0
Actinidia11437 Actinidia chinensis HOM05D004131 ORTHO05D004778 3.0e-28 129.4 71 85.9
RhsimUnG0015600 Rhododendron simsii HOM05D004131 ORTHO05D004778 2.8e-26 122.9 225 38.2
QL10p058548 Quercus lobata HOM05D004131 ORTHO05D004778 1.4e-25 120.6 65 92.3
QL10p059325 Quercus lobata HOM05D004131 ORTHO05D004778 1.4e-25 120.6 65 92.3
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 3.1e-25 119.4 81 70.4
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 1.2e-24 117.5 82 70.7
SEGI_19170 Sequoiadendron giganteum HOM05D004131 ORTHO05D004778 8.5e-23 111.3 76 68.4
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.9e-22 110.2 69 78.3
Oeu050314.3 Olea europaea HOM05D004131 ORTHO05D004778 5.5e-22 108.6 139 54.0
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 3.0e-20 102.8 81 66.7
CBR_g6538 Chara braunii HOM05D004131 ORTHO05D004778 1.7e-18 97.1 72 63.9
BraA09t40640Z Brassica rapa HOM05D004131 ORTHO05D004778 8.3e-18 94.7 82 62.2
ClCG08G000030 Citrullus lanatus HOM05D004131 ORTHO05D004778 1.1e-17 94.4 111 53.2
Lj6C255T9 Lonicera japonica HOM05D004131 ORTHO05D004778 4.1e-17 92.4 75 68.0
Cre16.g660850 Chlamydomonas reinhardtii HOM05D004131 ORTHO05D004778 5.4e-17 92.0 102 51.0
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 9.1e-17 91.3 93 58.1
SGA_v2.0_scaffold37G14924 Striga asiatica HOM05D004131 ORTHO05D004778 4.5e-16 89.0 148 45.3
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 1.7e-15 87.0 61 70.5
BcaC07g40508 Brassica carinata HOM05D004131 ORTHO05D004778 5.5e-14 82.0 77 58.4
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 5.5e-14 82.0 77 58.4
BolC8t51078H Brassica oleracea HOM05D004131 ORTHO05D004778 5.5e-14 82.0 77 58.4
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 1.2e-11 74.3 48 79.2
Thecc.04G162100 Theobroma cacao HOM05D004131 ORTHO05D004778 1.5e-11 73.9 51 80.4
Lju470A13T22 Lonicera japonica HOM05D004131 ORTHO05D004778 1.7e-10 70.5 48 77.1
Sed0017538 Sechium edule HOM05D004131 ORTHO05D004778 1.7e-10 70.5 34 91.2
QL10p059329 Quercus lobata HOM05D004131 ORTHO05D004778 3.7e-10 69.3 43 81.4
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 7.7e-08 61.6 45 71.1
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 6.6e-07 58.5 40 75.0
BcaB02g07200 Brassica carinata HOM05D004131 ORTHO05D004778 3.3e-06 56.2 47 63.8
Zm00001eb027620 Zea mays HOM05D002020 ORTHO05D002046 3.3e-06 56.2 38 73.7
Cpa.g.c34531 Carica papaya HOM05D004131 ORTHO05D004778 5.6e-06 55.5 29 89.7


User provided reference genes

Program Settings