Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 5.2e-86 321.6 246 100.0
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 1.6e-23 114.0 71 76.1
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 2.8e-23 113.2 71 76.1
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 2.8e-23 113.2 71 76.1
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 2.8e-23 113.2 71 76.1
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 1.8e-22 110.5 71 76.1
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 3.1e-22 109.8 71 76.1
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 4.0e-22 109.4 71 73.2
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 6.9e-22 108.6 71 76.1
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 6.9e-22 108.6 71 77.5
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 1.2e-21 107.8 71 74.6
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 1.5e-21 107.5 71 73.2
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 1.5e-21 107.5 71 73.2
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 2.0e-21 107.1 71 74.6
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 2.6e-21 106.7 71 73.2
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 2.6e-21 106.7 71 73.2
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 3.4e-21 106.3 71 71.8
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 3.4e-21 106.3 71 71.8
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 3.4e-21 106.3 71 73.2
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 5.8e-21 105.5 71 74.6
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 5.8e-21 105.5 71 74.6
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 7.6e-21 105.1 73 71.2
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 1.3e-20 104.4 71 74.6
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 1.7e-20 104.0 71 73.2
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 1.7e-20 104.0 73 69.9
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 2.9e-20 103.2 71 73.2
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 4.9e-20 102.4 71 71.8
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 8.4e-20 101.7 71 73.2
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 8.4e-20 101.7 71 69.0
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 1.1e-19 101.3 71 71.8
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 1.1e-19 101.3 71 70.4
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 1.4e-19 100.9 71 70.4
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 1.4e-19 100.9 71 70.4
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 1.9e-19 100.5 71 70.4
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 3.2e-19 99.8 71 69.0
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 4.2e-19 99.4 71 69.0
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 4.2e-19 99.4 71 69.0
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 5.4e-19 99.0 71 69.0
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 5.4e-19 99.0 71 70.4
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 5.4e-19 99.0 71 70.4
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 7.1e-19 98.6 71 70.4
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 7.1e-19 98.6 71 67.6
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 7.1e-19 98.6 71 67.6
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 9.3e-19 98.2 71 69.0
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 1.2e-18 97.8 71 69.0
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 1.2e-18 97.8 73 65.8
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 1.2e-18 97.8 71 70.4
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 1.2e-18 97.8 71 70.4
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 1.2e-18 97.8 71 70.4
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 1.6e-18 97.4 71 70.4
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 1.6e-18 97.4 71 67.6
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.6e-18 97.4 71 67.6
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 2.1e-18 97.1 71 66.2
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 2.7e-18 96.7 71 64.8
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 3.5e-18 96.3 71 67.6
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 3.5e-18 96.3 71 66.2
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 4.6e-18 95.9 71 69.0
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 6.0e-18 95.5 71 69.0
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 7.9e-18 95.1 71 66.2
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 1.0e-17 94.7 71 66.2
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 1.0e-17 94.7 71 67.6
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 1.3e-17 94.4 71 66.2
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.3e-17 94.4 71 66.2
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 1.3e-17 94.4 71 66.2
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 1.8e-17 94.0 71 66.2
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 3.0e-17 93.2 71 69.0
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 3.9e-17 92.8 71 67.6
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 1.5e-16 90.9 85 57.6
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 1.9e-16 90.5 71 64.8
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 1.9e-16 90.5 71 64.8
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 1.9e-16 90.5 71 64.8
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 1.9e-16 90.5 78 64.1
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 2.5e-16 90.1 71 64.8
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 2.5e-16 90.1 71 63.4
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 4.3e-16 89.4 71 66.2
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 5.6e-16 89.0 71 64.8
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 7.4e-16 88.6 71 63.4
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 7.4e-16 88.6 71 63.4
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 7.4e-16 88.6 71 64.8
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 1.3e-15 87.8 71 64.8
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 1.3e-15 87.8 106 49.1
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 1.6e-15 87.4 71 64.8
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 1.6e-15 87.4 97 53.6
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 2.1e-15 87.0 56 69.6
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 2.8e-15 86.7 71 63.4
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 3.6e-15 86.3 71 63.4
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 1.1e-14 84.7 71 62.0
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 1.1e-14 84.7 71 62.0
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.1e-14 84.7 64 62.5
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 1.4e-14 84.3 71 62.0
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 1.4e-14 84.3 71 60.6
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 5.3e-14 82.4 71 62.0
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 9.0e-14 81.6 71 60.6
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 1.2e-13 81.3 106 45.3
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 9.9e-13 78.2 135 39.3
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 9.9e-13 78.2 135 39.3
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 1.1e-11 74.7 71 62.0
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 5.5e-11 72.4 48 72.9
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 5.5e-11 72.4 71 57.7
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 4.6e-10 69.3 48 72.9
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 6.0e-10 68.9 51 68.6
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 1.3e-09 67.8 50 72.0
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 1.8e-09 67.4 48 72.9
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 5.1e-09 65.9 48 70.8
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 8.7e-09 65.1 48 68.8
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 1.5e-08 64.3 41 73.2
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 1.9e-08 63.9 71 52.1
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 2.8e-07 60.1 71 49.3
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 6.2e-07 58.9 47 57.4


User provided reference genes

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