Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 8.4e-268 926.4 452 100.0
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 1.1e-44 185.3 223 47.1
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 6.4e-42 176.0 243 44.0
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 1.5e-38 164.9 250 41.2
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 6.2e-37 159.5 211 42.7
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 1.5e-35 154.8 211 41.7
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.0e-34 152.1 238 36.6
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 1.6e-32 144.8 270 36.3
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 1.0e-31 142.1 235 37.9
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 1.0e-31 142.1 235 36.2
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 3.9e-31 140.2 232 35.8
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 2.8e-29 134.0 211 36.5
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 4.8e-29 133.3 302 32.5
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 6.2e-29 132.9 268 33.6
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 1.1e-28 132.1 214 36.9
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.1e-28 132.1 245 32.7
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 1.4e-28 131.7 284 32.4
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 5.8e-27 126.3 221 34.8
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 6.5e-26 122.9 253 30.8
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 4.2e-25 120.2 219 35.2
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 7.1e-25 119.4 316 30.1
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 1.2e-24 118.6 266 32.3
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 1.6e-24 118.2 248 34.3
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 4.6e-24 116.7 252 31.7
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 4.6e-24 116.7 257 33.5
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 6.1e-24 116.3 214 34.6
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 6.1e-24 116.3 256 34.0
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 3.0e-23 114.0 339 27.4
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 5.1e-23 113.2 229 34.5
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 6.7e-23 112.8 251 31.1
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 8.7e-23 112.5 250 33.2
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 1.1e-22 112.1 230 35.7
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 2.5e-22 110.9 258 32.2
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 3.3e-22 110.5 239 35.1
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 9.7e-22 109.0 141 39.7
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 1.3e-21 108.6 304 30.3
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 1.6e-21 108.2 247 30.8
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 8.2e-21 105.9 251 32.3
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.1e-20 105.5 119 45.4
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 1.8e-20 104.8 208 35.1
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 2.4e-20 104.4 177 38.4
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 2.4e-20 104.4 252 31.3
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 9.0e-20 102.4 251 32.3
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.2e-19 102.1 209 34.9
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.5e-19 101.7 209 34.9
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 3.4e-19 100.5 209 34.9
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 7.7e-19 99.4 251 30.7
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 2.2e-18 97.8 248 31.0
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 3.8e-18 97.1 204 35.3
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 8.5e-18 95.9 117 45.3
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 2.7e-16 90.9 231 30.3
MSTRG.19291 Avicennia marina HOM05D024698 ORTHO05D023381 3.6e-16 90.5 87 60.9
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 1.4e-15 88.6 263 30.4
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 1.8e-15 88.2 290 27.9
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 1.8e-15 88.2 248 31.0
unitig_22.g5135 Utricularia gibba HOM05D024698 ORTHO05D023381 5.1e-15 86.7 96 57.3
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 2.0e-14 84.7 242 31.0
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 2.5e-14 84.3 85 44.7
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 5.7e-14 83.2 186 31.7
SGA_v2.0_scaffold13G06676 Striga asiatica HOM05D024698 ORTHO05D023381 3.4e-11 73.9 81 53.1
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 6.5e-10 69.7 81 40.7
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 1.2e-08 65.5 63 46.0
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 1.6e-08 65.1 54 46.3
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 1.1e-06 58.9 84 36.9
Oeu017707.1 Olea europaea HOM05D008222 ORTHO05D010364 1.1e-06 58.9 59 47.5
QL12p028557 Quercus lobata HOM05D001413 ORTHO05D001385 4.4e-06 57.0 98 35.7
CARHR132250 Cardamine hirsuta HOM05D002912 ORTHO05D003191 7.4e-06 56.2 82 37.8


User provided reference genes

Program Settings