Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3496 Utricularia gibba HOM05D005255 ORTHO05D006276 1.8e-212 742.3 370 100.0
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 3.8e-56 223.0 409 38.1
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 2.8e-51 206.8 395 39.5
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 7.1e-47 192.2 346 40.2
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 9.3e-47 191.8 388 38.1
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 1.0e-45 188.3 386 38.6
TAR623G1440 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.0e-45 188.3 346 39.3
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 1.3e-45 188.0 396 35.9
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 2.3e-45 187.2 405 38.8
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 3.9e-45 186.4 421 34.4
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 6.6e-45 185.7 408 35.5
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 1.1e-44 184.9 391 35.8
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 1.1e-44 184.9 396 35.9
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 7.4e-44 182.2 348 38.2
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 1.6e-43 181.0 407 36.6
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 2.1e-43 180.6 396 34.6
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 9.0e-42 175.3 412 36.9
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 5.8e-41 172.6 406 33.5
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 1.3e-40 171.4 406 33.7
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 1.7e-40 171.0 405 35.3
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 1.4e-39 167.9 423 34.0
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 2.4e-39 167.2 272 43.8
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 9.3e-39 165.2 396 34.8
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 2.7e-38 163.7 447 30.6
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 1.0e-37 161.8 369 33.9
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 2.3e-37 160.6 394 34.0
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 5.1e-37 159.5 403 32.8
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 1.9e-36 157.5 405 32.1
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 2.5e-36 157.1 280 39.3
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 4.3e-36 156.4 391 34.3
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 5.6e-36 156.0 364 33.2
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 9.6e-36 155.2 289 38.1
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 1.3e-35 154.8 427 32.1
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 4.8e-35 152.9 405 32.8
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 4.8e-35 152.9 407 33.9
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 8.1e-35 152.1 411 31.6
Sc13g0001470 Simmondsia chinensis HOM05D005255 ORTHO05D006276 1.1e-34 151.8 409 34.2
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 1.4e-34 151.4 289 37.7
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 3.1e-34 150.2 399 32.1
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 4.0e-34 149.8 392 32.1
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 4.0e-34 149.8 417 32.6
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 5.3e-34 149.4 407 32.2
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 5.3e-34 149.4 414 30.7
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 9.0e-34 148.7 405 33.3
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 9.0e-34 148.7 402 32.3
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 2.0e-33 147.5 399 33.6
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 2.6e-33 147.1 398 33.2
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 3.4e-33 146.7 413 31.2
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 3.4e-33 146.7 416 31.7
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 3.4e-33 146.7 416 31.5
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 3.4e-33 146.7 270 41.1
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 4.5e-33 146.4 398 32.2
MSTRG.6397 Avicennia marina HOM05D005255 ORTHO05D006276 5.8e-33 146.0 248 40.7
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 2.2e-32 144.1 286 37.8
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 3.8e-32 143.3 399 32.6
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 6.5e-32 142.5 288 38.2
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 6.5e-32 142.5 398 31.2
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 1.1e-31 141.7 361 34.6
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 1.4e-31 141.4 409 32.0
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 5.5e-31 139.4 288 36.1
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 7.1e-31 139.0 414 30.2
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 7.9e-30 135.6 397 32.2
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 7.9e-30 135.6 423 30.0
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 1.3e-29 134.8 388 30.9
Cpa.g.sc120.15 Carica papaya HOM05D005255 ORTHO05D006276 2.3e-29 134.0 275 35.6
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 2.3e-29 134.0 410 30.2
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 2.3e-29 134.0 303 34.3
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 1.5e-28 131.3 254 37.4
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 1.5e-28 131.3 132 54.5
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 1.9e-28 131.0 335 34.0
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 3.3e-28 130.2 253 36.8
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 2.1e-27 127.5 295 34.6
CsaV3_4G021950 Cucumis sativus L. HOM05D005255 ORTHO05D006276 2.1e-27 127.5 193 40.9
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 2.8e-27 127.1 411 30.2
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 3.7e-27 126.7 249 37.8
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 4.8e-27 126.3 385 30.1
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.8e-26 124.4 262 37.0
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 2.4e-26 124.0 386 30.1
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 2.4e-26 124.0 329 32.5
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 3.1e-26 123.6 293 34.5
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 6.9e-26 122.5 398 29.1
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 1.5e-25 121.3 403 28.5
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 3.4e-25 120.2 287 35.9
FvH4_6g24820 Fragaria vesca HOM05D005255 ORTHO05D006276 7.6e-25 119.0 216 37.5
FAN14G1086 Fragaria x ananassa HOM05D005255 ORTHO05D006276 1.7e-24 117.9 216 37.0
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 1.7e-24 117.9 315 34.0
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 2.2e-24 117.5 386 29.0
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 2.2e-24 117.5 385 29.6
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 5.0e-24 116.3 137 47.4
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 5.0e-24 116.3 129 50.4
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 5.0e-24 116.3 136 47.8
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 5.0e-24 116.3 136 47.8
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 5.0e-24 116.3 129 50.4
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 2.5e-23 114.0 270 35.6
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 3.2e-23 113.6 167 41.3
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 2.9e-16 90.5 108 48.1
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 5.0e-16 89.7 180 36.1
FAN02G3622 Fragaria x ananassa HOM05D005255 ORTHO05D006276 1.2e-14 85.1 88 53.4
PGSC0003DMG400012726 Solanum tuberosum HOM05D005255 ORTHO05D006276 1.6e-14 84.7 145 38.6
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 2.1e-14 84.3 121 42.1
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 2.1e-14 84.3 121 42.1
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 2.1e-14 84.3 110 44.5
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 2.7e-14 84.0 140 37.1
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 1.4e-13 81.6 109 46.8
vmacro09036 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 4.3e-12 76.6 96 51.0
TAR628G1157 Trochodendron aralioides HOM05D005255 ORTHO05D006276 7.4e-12 75.9 135 40.0
RcHm_v2.0_Chr3g0484111 Rosa chinensis HOM05D005255 ORTHO05D006276 4.8e-11 73.2 98 46.9
Ca_13718_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 6.3e-11 72.8 200 33.5
Ca_30365_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 6.3e-11 72.8 79 49.4
HPP92_003249 Vanilla planifolia HOM05D005255 ORTHO05D006276 5.3e-10 69.7 87 43.7
RcHm_v2.0_Chr1g0374991 Rosa chinensis HOM05D005255 ORTHO05D006276 6.9e-10 69.3 46 73.9
vmacro09037 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 9.1e-10 68.9 191 34.6
SEGI_13590 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.5e-09 66.6 87 41.4
SEGI_39771 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 3.6e-06 57.0 44 52.3
Ca_08424_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 7.9e-06 55.8 37 75.7


User provided reference genes

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