Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3470 Utricularia gibba HOM05D007321 ORTHO05D009244 4.3e-83 311.2 153 100.0
Peaxi162Scf00328g00127 Petunia axillaris HOM05D007321 ORTHO05D009244 4.4e-59 231.5 152 71.1
Nitab4.5_0002105g0030 Nicotiana tabacum HOM05D007321 ORTHO05D009244 5.7e-59 231.1 152 69.1
Nitab4.5_0007385g0020 Nicotiana tabacum HOM05D007321 ORTHO05D009244 5.7e-59 231.1 152 69.1
Sopen02g028190 Solanum pennellii HOM05D007321 ORTHO05D009244 1.7e-58 229.6 148 72.3
Oeu037200.1 Olea europaea HOM05D007321 ORTHO05D009244 3.7e-58 228.4 148 72.3
Solyc02g083410.4 Solanum lycopersicum HOM05D007321 ORTHO05D009244 4.8e-58 228.0 150 70.7
MSTRG.16564 Avicennia marina HOM05D007321 ORTHO05D009244 1.8e-57 226.1 148 70.9
Migut.B00640 Erythranthe guttata HOM05D007321 ORTHO05D009244 3.1e-57 225.3 148 68.2
PGSC0003DMG400003660 Solanum tuberosum HOM05D007321 ORTHO05D009244 5.9e-56 221.1 147 70.1
Potri.001G344800 Populus trichocarpa HOM05D007321 ORTHO05D009244 1.3e-55 219.9 148 66.9
Cc02_g21870 Coffea canephora HOM05D007321 ORTHO05D009244 2.9e-55 218.8 147 66.7
SalBow5G3411 Salvia bowleyana HOM05D007321 ORTHO05D009244 3.8e-55 218.4 148 67.6
FvH4_3g40270 Fragaria vesca HOM05D007321 ORTHO05D009244 2.5e-54 215.7 147 66.7
FAN21G2259 Fragaria x ananassa HOM05D007321 ORTHO05D009244 2.5e-54 215.7 147 66.7
Sabra16G0223900 Salix brachista HOM05D007321 ORTHO05D009244 2.5e-54 215.7 148 65.5
DCAR_021840 Daucus carota HOM05D000446 ORTHO05D000321 3.2e-54 215.3 148 65.5
FAN11G3563 Fragaria x ananassa HOM05D007321 ORTHO05D009244 3.2e-54 215.3 147 66.7
FAN16G2899 Fragaria x ananassa HOM05D007321 ORTHO05D009244 3.2e-54 215.3 147 66.7
FAN25G3421 Fragaria x ananassa HOM05D007321 ORTHO05D009244 5.5e-54 214.5 147 66.0
CsaV3_3G040590 Cucumis sativus L. HOM05D007321 ORTHO05D009244 2.7e-53 212.2 148 63.5
MELO3C009790.2 Cucumis melo HOM05D007321 ORTHO05D009244 3.6e-53 211.8 148 63.5
Lj5P243T60 Lonicera japonica HOM05D007321 ORTHO05D009244 3.6e-53 211.8 148 66.2
Phvul.002G206500 Phaseolus vulgaris HOM05D007321 ORTHO05D009244 6.1e-53 211.1 146 65.8
CAN.G890.33 Capsicum annuum HOM05D007321 ORTHO05D009244 8.0e-53 210.7 136 72.8
AUR62027387 Chenopodium quinoa HOM05D007321 ORTHO05D009244 1.8e-52 209.5 149 65.1
Rhsim05G0110900 Rhododendron simsii HOM05D007321 ORTHO05D009244 1.8e-52 209.5 148 64.9
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 2.3e-52 209.1 147 64.6
Eucgr.I02693 Eucalyptus grandis HOM05D007321 ORTHO05D009244 2.3e-52 209.1 148 65.5
Gorai.012G140200 Gossypium raimondii HOM05D007321 ORTHO05D009244 2.3e-52 209.1 147 65.3
RcHm_v2.0_Chr5g0072531 Rosa chinensis HOM05D007321 ORTHO05D009244 2.3e-52 209.1 147 64.6
Cfa005577 Carpinus fangiana HOM05D007321 ORTHO05D009244 3.0e-52 208.8 148 65.5
Gohir.A04G112300 Gossypium hirsutum HOM05D007321 ORTHO05D009244 3.0e-52 208.8 147 65.3
Gohir.D04G153300 Gossypium hirsutum HOM05D007321 ORTHO05D009244 3.0e-52 208.8 147 65.3
Thecc.02G143600 Theobroma cacao HOM05D007321 ORTHO05D009244 3.0e-52 208.8 147 66.0
Psat1g188000 Pisum sativum HOM05D007321 ORTHO05D009244 4.0e-52 208.4 149 62.4
GSVIVG01029706001 Vitis vinifera HOM05D007321 ORTHO05D009244 5.2e-52 208.0 144 64.6
Lj4g0025169 Lotus japonicus HOM05D007321 ORTHO05D009244 6.8e-52 207.6 144 64.6
VMungo0251G3312 Vigna mungo HOM05D007321 ORTHO05D009244 6.8e-52 207.6 147 64.6
Duzib052G0820 Durio zibethinus HOM05D007321 ORTHO05D009244 1.5e-51 206.5 147 65.3
Prupe.6G043200 Prunus persica HOM05D007321 ORTHO05D009244 1.5e-51 206.5 147 65.3
CANSAT80G1420 Cannabis sativa HOM05D007321 ORTHO05D009244 2.0e-51 206.1 153 62.1
ECA236G2671 Erigeron canadensis HOM05D007321 ORTHO05D009244 2.0e-51 206.1 148 65.5
Lsat_1_v5_gn_7_80180 Lactuca sativa HOM05D007321 ORTHO05D009244 2.0e-51 206.1 149 65.8
Carub.0003s0867 Capsella rubella HOM05D007321 ORTHO05D009244 2.6e-51 205.7 148 60.8
HanXRQChr11g0337111 Helianthus annuus HOM05D007321 ORTHO05D009244 2.6e-51 205.7 148 64.9
BcaC05g29686 Brassica carinata HOM05D007321 ORTHO05D009244 3.4e-51 205.3 148 61.5
A05p39470 Brassica napus HOM05D007321 ORTHO05D009244 3.4e-51 205.3 148 62.2
BraA05t22728Z Brassica rapa HOM05D007321 ORTHO05D009244 3.4e-51 205.3 148 62.2
SGA_v2.0_scaffold332G48942 Striga asiatica HOM05D007321 ORTHO05D009244 3.4e-51 205.3 148 63.5
ClCG10G015890 Citrullus lanatus HOM05D007321 ORTHO05D009244 4.4e-51 204.9 148 62.2
Medtr4g094295 Medicago truncatula HOM05D007321 ORTHO05D009244 4.4e-51 204.9 149 61.7
Glyma.05G120300 Glycine max HOM05D007321 ORTHO05D009244 5.7e-51 204.5 147 63.9
Nn1g05198 Nelumbo nucifera HOM05D007321 ORTHO05D009244 5.7e-51 204.5 147 64.6
C05p58490 Brassica napus HOM05D007321 ORTHO05D009244 9.8e-51 203.8 148 62.2
BolC5t34500H Brassica oleracea HOM05D007321 ORTHO05D009244 9.8e-51 203.8 148 62.2
Atru.chr6.902 Acer truncatum HOM05D007321 ORTHO05D009244 1.7e-50 203.0 147 63.9
Manes.16G135300 Manihot esculenta HOM05D007321 ORTHO05D009244 1.7e-50 203.0 147 61.9
EL10Ac8g19338 Beta vulgaris HOM05D007321 ORTHO05D009244 2.2e-50 202.6 151 62.9
PGR142G0984 Punica granatum HOM05D007321 ORTHO05D009244 2.2e-50 202.6 147 63.9
TPR.G10452 Trifolium pratense HOM05D007321 ORTHO05D009244 2.8e-50 202.2 148 60.8
Sed0000618 Sechium edule HOM05D007321 ORTHO05D009244 4.8e-50 201.4 147 62.6
CARHR083990 Cardamine hirsuta HOM05D007321 ORTHO05D009244 6.3e-50 201.1 148 58.8
Thhalv10003042m.g Eutrema salsugineum HOM05D007321 ORTHO05D009244 8.3e-50 200.7 148 60.1
AT3G09580 Arabidopsis thaliana HOM05D007321 ORTHO05D009244 1.1e-49 200.3 148 60.1
CiPaw.05G039000 Carya illinoinensis HOM05D007321 ORTHO05D009244 1.1e-49 200.3 148 61.5
Sp3g07930 Schrenkiella parvula HOM05D007321 ORTHO05D009244 1.1e-49 200.3 147 59.9
MD03G1054600 Malus domestica HOM05D007321 ORTHO05D009244 1.4e-49 199.9 147 62.6
AL3G20750 Arabidopsis lyrata HOM05D007321 ORTHO05D009244 1.8e-49 199.5 148 58.8
TWI59G1034 Tripterygium wilfordii HOM05D007321 ORTHO05D009244 1.8e-49 199.5 147 62.6
Actinidia28071 Actinidia chinensis HOM05D007321 ORTHO05D009244 2.4e-49 199.1 141 63.1
Ah.14g085390 Amaranthus hybridus HOM05D007321 ORTHO05D009244 2.4e-49 199.1 149 63.1
Ciclev10004047m.g Citrus clementina HOM05D007321 ORTHO05D009244 2.4e-49 199.1 155 59.4
Aqoxy6G00494 Aquilegia oxysepala HOM05D007321 ORTHO05D009244 3.1e-49 198.7 150 64.0
Cpa.g.sc52.12 Carica papaya HOM05D007321 ORTHO05D009244 4.1e-49 198.4 149 61.7
QL11p019400 Quercus lobata HOM05D007321 ORTHO05D009244 7.0e-49 197.6 144 62.5
SEGI_02418 Sequoiadendron giganteum HOM05D007321 ORTHO05D009244 2.0e-48 196.1 149 63.1
THA.LOC104826997 Tarenaya hassleriana HOM05D007321 ORTHO05D009244 2.7e-48 195.7 148 59.5
ATR0580G200 Amborella trichopoda HOM05D007321 ORTHO05D009244 3.5e-48 195.3 145 64.1
Zm00001eb328010 Zea mays HOM05D007321 ORTHO05D009244 4.5e-48 194.9 148 64.2
Dinv19324 Davidia involucrata HOM05D007321 ORTHO05D009244 1.0e-47 193.7 134 64.9
Aa31LG3G2030 Aethionema arabicum HOM05D007321 ORTHO05D009244 1.3e-47 193.4 144 60.4
AUR62031301 Chenopodium quinoa HOM05D007321 ORTHO05D009244 1.7e-47 193.0 140 65.0
CSS0020188 Camellia sinensis var. sinensis HOM05D007321 ORTHO05D009244 5.0e-47 191.4 148 61.5
Lalb_Chr07g0189441 Lupinus albus HOM05D007321 ORTHO05D009244 6.5e-47 191.0 146 61.6
Sc14g0002750 Simmondsia chinensis HOM05D007321 ORTHO05D009244 1.5e-46 189.9 144 58.3
PSO541G5651 Papaver somniferum HOM05D007321 ORTHO05D009244 4.2e-46 188.3 147 61.2
MBI05_g36588_MAGBIO Magnolia biondii HOM05D007321 ORTHO05D009244 9.4e-46 187.2 145 63.4
CDE06G0306 Ceratophyllum demersum HOM05D007321 ORTHO05D009244 8.0e-45 184.1 149 59.1
Os07g0626800 Oryza sativa ssp. japonica HOM05D007321 ORTHO05D009244 2.6e-43 179.1 148 59.5
SMO116G0156 Selaginella moellendorffii HOM05D007321 ORTHO05D009244 5.7e-43 177.9 145 60.0
Pp3c2_19910 Physcomitrium patens HOM05D007321 ORTHO05D009244 2.2e-42 176.0 144 59.0
PSO675G7953 Papaver somniferum HOM05D007321 ORTHO05D009244 4.1e-41 171.8 133 60.2
Mapoly0005s0009 Marchantia polymorpha HOM05D007321 ORTHO05D009244 5.4e-41 171.4 144 56.9
Cre12.g560900 Chlamydomonas reinhardtii HOM05D007321 ORTHO05D009244 1.2e-35 153.7 132 56.8
CBR_g49724 Chara braunii HOM05D007321 ORTHO05D009244 1.5e-35 153.3 145 51.0
MBI05_g44826_MAGBIO Magnolia biondii HOM05D007321 ORTHO05D009244 4.1e-33 145.2 116 62.1
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 1.3e-31 140.2 147 46.9
AagrBONN_evm.TU.Sc2ySwM_344.1849 Anthoceros agrestis HOM05D007321 ORTHO05D009244 1.5e-30 136.7 144 46.5
MCO04G135 Micromonas commoda HOM05D007321 ORTHO05D009244 3.3e-30 135.6 154 44.8
TAR381G1585 Trochodendron aralioides HOM05D007321 ORTHO05D009244 4.9e-18 95.1 84 54.8
Ca_18334_v3 Cicer arietinum L. HOM05D005078 ORTHO05D007574 2.4e-17 92.8 67 64.2


User provided reference genes

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