Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3463 Utricularia gibba HOM05D050847 ORTHO05D002430 3.7e-188 661.4 328 100.0
unitig_22.g6911 Utricularia gibba HOM05D050847 ORTHO05D002430 3.1e-78 296.2 328 52.7
Migut.L01302 Erythranthe guttata HOM05D002654 ORTHO05D002430 7.0e-22 109.0 334 34.7
unitig_22.g6521 Utricularia gibba HOM05D002654 ORTHO05D002430 2.6e-16 90.5 303 31.7
MSTRG.7806 Avicennia marina HOM05D002654 ORTHO05D002430 3.2e-14 83.6 320 30.0
Oeu054885.1 Olea europaea HOM05D002654 ORTHO05D002430 5.4e-14 82.8 383 29.0
Cfa008990 Carpinus fangiana HOM05D002654 ORTHO05D002430 9.2e-14 82.0 372 28.5
Oeu054883.1 Olea europaea HOM05D002654 ORTHO05D002430 2.7e-13 80.5 341 30.2
Aa31LG1G780 Aethionema arabicum HOM05D002654 ORTHO05D002430 1.0e-12 78.6 328 29.3
SalBow2G3214 Salvia bowleyana HOM05D002654 ORTHO05D002430 6.6e-12 75.9 297 27.6
Dinv34160 Davidia involucrata HOM05D002654 ORTHO05D002430 1.5e-11 74.7 361 27.1
Manes.05G100700 Manihot esculenta HOM05D002654 ORTHO05D002430 1.5e-11 74.7 322 29.5
FAN17G2513 Fragaria x ananassa HOM05D002654 ORTHO05D002430 1.9e-11 74.3 383 28.7
Manes.06G093600 Manihot esculenta HOM05D002654 ORTHO05D002430 2.5e-11 73.9 160 38.1
Nitab4.5_0007501g0020 Nicotiana tabacum HOM05D002654 ORTHO05D002430 5.6e-11 72.8 302 31.1
Nitab4.5_0000703g0220 Nicotiana tabacum HOM05D002654 ORTHO05D002430 1.2e-10 71.6 308 30.2
Lsat_1_v5_gn_8_53241 Lactuca sativa HOM05D002654 ORTHO05D002430 1.6e-10 71.2 358 28.2
Manes.14G077400 Manihot esculenta HOM05D002654 ORTHO05D002430 1.6e-10 71.2 161 40.4
Hma1.2p1_0265F.1_g106720 Hydrangea macrophylla HOM05D002654 ORTHO05D002430 2.8e-10 70.5 244 29.9
Cc11_g13080 Coffea canephora HOM05D002654 ORTHO05D002430 3.6e-10 70.1 346 28.0
FAN22G0634 Fragaria x ananassa HOM05D002654 ORTHO05D002430 4.7e-10 69.7 383 28.7
RcHm_v2.0_Chr4g0439931 Rosa chinensis HOM05D002654 ORTHO05D002430 4.7e-10 69.7 376 26.6
CiPaw.12G013900 Carya illinoinensis HOM05D002654 ORTHO05D002430 6.2e-10 69.3 147 34.7
ClCG04G012340 Citrullus lanatus HOM05D002654 ORTHO05D002430 6.2e-10 69.3 162 38.3
Sopen05g003360 Solanum pennellii HOM05D002654 ORTHO05D002430 6.2e-10 69.3 385 27.5
Sabra15G0087900 Salix brachista HOM05D002654 ORTHO05D002430 8.0e-10 68.9 161 35.4
Nitab4.5_0012137g0010 Nicotiana tabacum HOM05D002654 ORTHO05D002430 1.0e-09 68.6 359 28.7
TAR629G0269 Trochodendron aralioides HOM05D002654 ORTHO05D002430 1.8e-09 67.8 182 34.1
FAN07G1505 Fragaria x ananassa HOM05D002654 ORTHO05D002430 2.3e-09 67.4 381 28.3
CAN.G58.27 Capsicum annuum HOM05D002654 ORTHO05D002430 3.1e-09 67.0 120 41.7
DCAR_024160 Daucus carota HOM05D002654 ORTHO05D002430 3.1e-09 67.0 365 26.8
FvH4_4g31450 Fragaria vesca HOM05D002654 ORTHO05D002430 3.1e-09 67.0 384 28.4
CSS0046015 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 4.0e-09 66.6 297 30.3
Gorai.001G071900 Gossypium raimondii HOM05D002654 ORTHO05D002430 4.0e-09 66.6 377 28.1
MBI05_g08278_MAGBIO Magnolia biondii HOM05D002654 ORTHO05D002430 4.0e-09 66.6 134 40.3
Nitab4.5_0000842g0040 Nicotiana tabacum HOM05D002654 ORTHO05D002430 4.0e-09 66.6 360 28.6
Sed0007876 Sechium edule HOM05D002654 ORTHO05D002430 4.0e-09 66.6 134 40.3
Gohir.D07G068400 Gossypium hirsutum HOM05D002654 ORTHO05D002430 5.2e-09 66.2 377 28.1
PGR119G1217 Punica granatum HOM05D002654 ORTHO05D002430 5.2e-09 66.2 365 28.8
GSVIVG01019998001 Vitis vinifera HOM05D002654 ORTHO05D002430 5.2e-09 66.2 296 32.1
Haze_07337 Corylus avellana HOM05D002654 ORTHO05D002430 8.9e-09 65.5 341 26.4
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 8.9e-09 65.5 162 37.0
CsaV3_1G005380 Cucumis sativus L. HOM05D002654 ORTHO05D002430 8.9e-09 65.5 161 34.8
QL03p062934 Quercus lobata HOM05D002654 ORTHO05D002430 8.9e-09 65.5 118 39.0
QL03p064352 Quercus lobata HOM05D002654 ORTHO05D002430 8.9e-09 65.5 118 39.0
MD16G1073600 Malus domestica HOM05D002654 ORTHO05D002430 1.2e-08 65.1 275 28.0
Peaxi162Scf00541g00022 Petunia axillaris HOM05D002654 ORTHO05D002430 1.2e-08 65.1 132 42.4
PGSC0003DMG400031263 Solanum tuberosum HOM05D002654 ORTHO05D002430 1.2e-08 65.1 366 27.3
CSS0017824 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 1.5e-08 64.7 297 30.3
AUR62005769 Chenopodium quinoa HOM05D002654 ORTHO05D002430 1.5e-08 64.7 181 33.7
AUR62028788 Chenopodium quinoa HOM05D002654 ORTHO05D002430 1.5e-08 64.7 175 33.1
Duzib205G1664 Durio zibethinus HOM05D002654 ORTHO05D002430 1.5e-08 64.7 210 31.9
Psat4g134160 Pisum sativum HOM05D002654 ORTHO05D002430 1.5e-08 64.7 325 27.4
QL10p016685 Quercus lobata HOM05D002654 ORTHO05D002430 2.0e-08 64.3 161 34.8
Solyc05g007480.1 Solanum lycopersicum HOM05D002654 ORTHO05D002430 2.0e-08 64.3 252 29.0
CAN.G628.23 Capsicum annuum HOM05D002654 ORTHO05D002430 2.6e-08 63.9 125 41.6
CiPaw.05G136200 Carya illinoinensis HOM05D002654 ORTHO05D002430 2.6e-08 63.9 156 33.3
Eucgr.B00480 Eucalyptus grandis HOM05D002654 ORTHO05D002430 2.6e-08 63.9 345 27.8
GSVIVG01008021001 Vitis vinifera HOM05D002654 ORTHO05D002430 2.6e-08 63.9 341 30.5
Cpa.g.sc111.2 Carica papaya HOM05D002654 ORTHO05D002430 3.4e-08 63.5 151 32.5
Sopen06g027150 Solanum pennellii HOM05D002654 ORTHO05D002430 3.4e-08 63.5 211 32.2
Gohir.A07G063650 Gossypium hirsutum HOM05D002654 ORTHO05D002430 4.4e-08 63.2 254 29.9
Oeu033362.1 Olea europaea HOM05D002654 ORTHO05D002430 4.4e-08 63.2 124 37.9
Thecc.03G084900 Theobroma cacao HOM05D002654 ORTHO05D002430 4.4e-08 63.2 200 33.5
CiPaw.06G084100 Carya illinoinensis HOM05D002654 ORTHO05D002430 5.8e-08 62.8 125 38.4
Lj2g0004439 Lotus japonicus HOM05D002654 ORTHO05D002430 5.8e-08 62.8 291 27.5
CSS0037456 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 7.5e-08 62.4 329 26.7
CiPaw.11G043200 Carya illinoinensis HOM05D002654 ORTHO05D002430 7.5e-08 62.4 368 26.9
ECA233G3156 Erigeron canadensis HOM05D002654 ORTHO05D002430 7.5e-08 62.4 288 30.2
Lalb_Chr17g0340621 Lupinus albus HOM05D002654 ORTHO05D002430 7.5e-08 62.4 143 36.4
Nitab4.5_0002352g0050 Nicotiana tabacum HOM05D002654 ORTHO05D002430 7.5e-08 62.4 344 29.9
Sed0007158 Sechium edule HOM05D002654 ORTHO05D002430 7.5e-08 62.4 134 37.3
TAR371G1053 Trochodendron aralioides HOM05D002654 ORTHO05D002430 7.5e-08 62.4 390 26.4
Aqoxy3G00669 Aquilegia oxysepala HOM05D002654 ORTHO05D002430 9.8e-08 62.0 140 35.0
Glyma.01G046600 Glycine max HOM05D002654 ORTHO05D002430 9.8e-08 62.0 130 36.2
HanXRQChr08g0210521 Helianthus annuus HOM05D002654 ORTHO05D002430 1.3e-07 61.6 133 39.8
Lalb_Chr05g0220401 Lupinus albus HOM05D002654 ORTHO05D002430 1.3e-07 61.6 258 29.5
Potri.015G062600 Populus trichocarpa HOM05D002654 ORTHO05D002430 1.7e-07 61.2 136 36.0
Ca_24217_v3 Cicer arietinum L. HOM05D002654 ORTHO05D002430 2.2e-07 60.8 301 27.6
Solyc06g069880.1 Solanum lycopersicum HOM05D002654 ORTHO05D002430 2.2e-07 60.8 211 32.2
PGSC0003DMG400033102 Solanum tuberosum HOM05D002654 ORTHO05D002430 2.2e-07 60.8 160 34.4
Nitab4.5_0000269g0010 Nicotiana tabacum HOM05D002654 ORTHO05D002430 2.9e-07 60.5 287 29.3
ClCG11G009990 Citrullus lanatus HOM05D002654 ORTHO05D002430 3.7e-07 60.1 118 39.8
Cfa018955 Carpinus fangiana HOM05D002654 ORTHO05D002430 4.9e-07 59.7 165 33.3
Prupe.1G273300 Prunus persica HOM05D002654 ORTHO05D002430 4.9e-07 59.7 110 36.4
THA.LOC104801849 Tarenaya hassleriana HOM05D002654 ORTHO05D002430 4.9e-07 59.7 352 27.6
Atru.chr9.2262 Acer truncatum HOM05D002654 ORTHO05D002430 6.4e-07 59.3 151 37.1
Ah.02g113400 Amaranthus hybridus HOM05D002654 ORTHO05D002430 6.4e-07 59.3 105 41.0
COL.COLO4_23006 Corchorus olitorius HOM05D002654 ORTHO05D002430 6.4e-07 59.3 244 29.1
CsaV3_5G032620 Cucumis sativus L. HOM05D002654 ORTHO05D002430 6.4e-07 59.3 123 35.8
Dinv16639 Davidia involucrata HOM05D002654 ORTHO05D002430 6.4e-07 59.3 379 28.0
Psat2g120280 Pisum sativum HOM05D002654 ORTHO05D002430 6.4e-07 59.3 146 35.6
Aa31LG2G7400 Aethionema arabicum HOM05D002654 ORTHO05D002430 8.3e-07 58.9 133 37.6
COL.COLO4_24533 Corchorus olitorius HOM05D002654 ORTHO05D002430 8.3e-07 58.9 139 36.0
BraA09t38005Z Brassica rapa HOM05D002654 ORTHO05D002430 1.1e-06 58.5 285 27.7
ECA233G4149 Erigeron canadensis HOM05D002654 ORTHO05D002430 1.1e-06 58.5 356 26.4
TWI18G0518 Tripterygium wilfordii HOM05D002654 ORTHO05D002430 1.1e-06 58.5 115 41.7
AL5G12550 Arabidopsis lyrata HOM05D002654 ORTHO05D002430 1.4e-06 58.2 291 26.1
CANSAT64G2692 Cannabis sativa HOM05D002654 ORTHO05D002430 1.4e-06 58.2 328 27.1
Duzib084G1162 Durio zibethinus HOM05D002654 ORTHO05D002430 1.4e-06 58.2 161 36.6
ECA232G0660 Erigeron canadensis HOM05D000087 ORTHO05D000439 1.4e-06 58.2 116 38.8
Peaxi162Scf00013g00213 Petunia axillaris HOM05D002654 ORTHO05D002430 1.4e-06 58.2 286 31.5
Peaxi162Scf06066g00003 Petunia axillaris HOM05D000087 ORTHO05D002430 1.4e-06 58.2 286 31.5
Sp1g12630 Schrenkiella parvula HOM05D002654 ORTHO05D002430 1.4e-06 58.2 356 27.0
CSS0036856 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 1.9e-06 57.8 353 26.9
Psat4g131840 Pisum sativum HOM05D002654 ORTHO05D002430 1.9e-06 57.8 322 26.7
Ah.03g135150 Amaranthus hybridus HOM05D002654 ORTHO05D002430 2.4e-06 57.4 174 28.7
AUR62021705 Chenopodium quinoa HOM05D002654 ORTHO05D002430 2.4e-06 57.4 286 28.0
PSO017G0875 Papaver somniferum HOM05D002654 ORTHO05D002430 2.4e-06 57.4 122 41.0
VMungo1215G1652 Vigna mungo HOM05D002654 ORTHO05D002430 2.4e-06 57.4 137 34.3
Duzib251G0139 Durio zibethinus HOM05D002654 ORTHO05D002430 3.2e-06 57.0 159 33.3
HanXRQChr08g0210531 Helianthus annuus HOM05D002654 ORTHO05D002430 3.2e-06 57.0 133 37.6
Sp2g13980 Schrenkiella parvula HOM05D002654 ORTHO05D002430 3.2e-06 57.0 298 26.5
Sc04g0008200 Simmondsia chinensis HOM05D002654 ORTHO05D002430 3.2e-06 57.0 147 31.3
Thecc.02G347200 Theobroma cacao HOM05D002654 ORTHO05D002430 4.1e-06 56.6 317 26.5
Ca_04788_v3 Cicer arietinum L. HOM05D002654 ORTHO05D002430 5.4e-06 56.2 355 24.5
Eucgr.G02509 Eucalyptus grandis HOM05D002654 ORTHO05D002430 5.4e-06 56.2 119 37.0
Ah.02g129730 Amaranthus hybridus HOM05D002654 ORTHO05D002430 7.0e-06 55.8 183 27.9
BcaC04g21510 Brassica carinata HOM05D002654 ORTHO05D002430 7.0e-06 55.8 285 26.0
C09p30930 Brassica napus HOM05D002654 ORTHO05D002430 7.0e-06 55.8 285 26.0
BolC9t55953H Brassica oleracea HOM05D002654 ORTHO05D002430 7.0e-06 55.8 285 26.0
Glyma.02G106800 Glycine max HOM05D002654 ORTHO05D002430 7.0e-06 55.8 301 24.9
Gorai.008G192500 Gossypium raimondii HOM05D002654 ORTHO05D002430 7.0e-06 55.8 336 30.4
Lalb_Chr10g0098231 Lupinus albus HOM05D002654 ORTHO05D002430 7.0e-06 55.8 131 37.4
Rhsim12G0063400 Rhododendron simsii HOM05D002654 ORTHO05D002430 7.0e-06 55.8 73 43.8
arahy.Tifrunner.gnm1.ann1.63G1Z6 Arachis hypogaea HOM05D002654 ORTHO05D002430 9.2e-06 55.5 126 34.1
arahy.Tifrunner.gnm1.ann1.YTB47M Arachis hypogaea HOM05D002654 ORTHO05D002430 9.2e-06 55.5 129 34.1
AUR62008391 Chenopodium quinoa HOM05D002654 ORTHO05D002430 9.2e-06 55.5 141 34.8
TWI15G0870 Tripterygium wilfordii HOM05D002654 ORTHO05D002430 9.2e-06 55.5 116 37.1
HPP92_018501 Vanilla planifolia HOM05D044272 ORTHO05D051572 9.2e-06 55.5 322 27.0


User provided reference genes

Program Settings