Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 4.2e-192 674.5 329 100.0
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 5.8e-125 451.4 316 69.9
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.3e-124 450.3 292 72.6
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 2.2e-124 449.5 288 73.6
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 8.3e-124 447.6 278 75.9
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 1.9e-123 446.4 329 66.9
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 3.2e-123 445.7 337 66.5
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.2e-122 443.7 288 74.3
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 4.6e-122 441.8 287 72.8
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 6.0e-122 441.4 279 73.1
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.0e-121 440.7 305 69.2
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 1.7e-121 439.9 288 72.6
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 1.7e-121 439.9 280 75.0
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 2.3e-121 439.5 306 68.3
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.3e-121 439.5 281 73.0
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 3.0e-121 439.1 317 68.5
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 3.0e-121 439.1 327 67.0
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 3.9e-121 438.7 305 68.9
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 3.9e-121 438.7 333 66.1
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 5.1e-121 438.3 300 70.0
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 5.1e-121 438.3 336 64.3
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 8.6e-121 437.6 278 74.5
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.1e-120 437.2 306 68.0
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 1.1e-120 437.2 306 68.3
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 1.1e-120 437.2 288 71.9
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.5e-120 436.8 306 68.0
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.5e-120 436.0 279 73.1
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 3.3e-120 435.6 278 73.4
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 7.3e-120 434.5 300 69.0
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.3e-120 434.5 305 68.2
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 9.5e-120 434.1 280 73.9
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 9.5e-120 434.1 323 67.2
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 2.1e-119 433.0 278 73.7
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.8e-119 432.6 280 72.9
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 3.6e-119 432.2 278 73.0
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.6e-119 432.2 278 73.0
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 3.6e-119 432.2 309 68.3
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 4.7e-119 431.8 288 74.0
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 6.2e-119 431.4 306 68.0
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 6.2e-119 431.4 288 70.8
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 1.1e-118 430.6 281 71.9
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.4e-118 430.3 324 64.8
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.4e-118 430.3 332 64.2
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.8e-118 429.9 315 66.7
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.8e-118 429.9 323 66.9
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 3.1e-118 429.1 288 71.2
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 4.0e-118 428.7 296 68.9
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 6.8e-118 427.9 272 74.3
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 3.4e-117 425.6 287 69.7
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 4.4e-117 425.2 277 72.2
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 7.6e-117 424.5 290 70.0
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 9.9e-117 424.1 264 74.2
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 9.9e-117 424.1 272 73.9
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.3e-116 423.7 317 66.2
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 2.2e-116 422.9 321 64.8
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 2.9e-116 422.5 265 73.2
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 2.9e-116 422.5 256 76.6
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 3.8e-116 422.2 281 70.5
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 4.9e-116 421.8 265 73.2
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 4.9e-116 421.8 282 70.2
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 6.4e-116 421.4 265 73.6
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 8.4e-116 421.0 281 70.1
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 8.4e-116 421.0 265 72.8
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.1e-115 420.6 302 67.2
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 1.4e-115 420.2 265 72.8
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 2.4e-115 419.5 280 70.0
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.4e-115 419.5 294 69.7
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 2.4e-115 419.5 320 65.9
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 4.1e-115 418.7 280 69.6
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 5.4e-115 418.3 262 75.2
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 7.1e-115 417.9 323 64.4
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 9.2e-115 417.5 375 57.6
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.2e-114 417.2 281 69.8
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.6e-114 416.8 281 69.8
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 3.5e-114 415.6 264 73.9
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 4.6e-114 415.2 278 71.6
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.3e-113 413.7 293 68.3
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 5.1e-113 411.8 262 74.8
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.5e-112 410.2 349 60.2
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 4.3e-112 408.7 297 68.0
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 7.3e-112 407.9 261 72.8
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 2.1e-111 406.4 261 73.2
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 5.2e-110 401.7 280 69.6
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 6.9e-110 401.4 254 73.6
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.1e-107 394.0 252 71.8
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 9.3e-107 391.0 329 59.6
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 3.0e-105 386.0 258 70.2
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.6e-103 380.2 258 68.6
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.8e-103 379.4 408 50.2
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.7e-100 370.2 230 76.5
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 1.3e-95 354.0 300 60.0
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 1.4e-94 350.5 303 54.8
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 5.3e-94 348.6 309 55.0
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 1.7e-92 343.6 280 60.4
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 4.5e-85 318.9 274 59.5
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.2e-84 316.6 266 56.0
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 6.5e-84 315.1 219 69.9
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.9e-83 313.5 260 60.8
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.2e-82 310.8 317 55.2
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.8e-81 307.0 237 59.9
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.3e-79 300.8 278 57.9
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.9e-77 292.0 157 82.8
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 1.4e-65 254.2 160 72.5
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 5.0e-60 235.7 147 73.5
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 3.7e-55 219.5 267 43.4
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 3.1e-54 216.5 134 75.4
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 6.5e-52 208.8 135 70.4
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 3.2e-51 206.5 216 50.0
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 4.2e-51 206.1 134 71.6
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.1e-43 181.4 134 60.4
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.7e-42 176.8 97 83.5
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 2.0e-29 134.0 269 31.6
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.0e-29 134.0 260 33.1
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 6.6e-28 129.0 290 33.1
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 6.8e-17 92.4 95 50.5
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 4.1e-14 83.2 99 45.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 4.4e-08 63.2 59 47.5


User provided reference genes

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