Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3401 Utricularia gibba HOM05D000354 ORTHO05D000747 7.9e-77 290.4 153 100.0
Migut.B01803 Erythranthe guttata HOM05D000354 ORTHO05D000747 6.4e-26 121.3 100 67.0
Oeu054359.1 Olea europaea HOM05D000354 ORTHO05D000747 1.9e-25 119.8 105 64.8
MSTRG.20865 Avicennia marina HOM05D000354 ORTHO05D000747 5.0e-23 111.7 101 58.4
Solyc10g011880.1 Solanum lycopersicum HOM05D000354 ORTHO05D000747 6.6e-23 111.3 116 48.3
PGSC0003DMG400019406 Solanum tuberosum HOM05D000354 ORTHO05D000747 1.1e-22 110.5 96 56.2
Sopen10g005680 Solanum pennellii HOM05D000354 ORTHO05D000747 2.5e-22 109.4 96 55.2
Peaxi162Scf00585g00061 Petunia axillaris HOM05D000354 ORTHO05D000747 5.6e-22 108.2 98 56.1
Sopen01g038970 Solanum pennellii HOM05D000354 ORTHO05D000747 9.5e-22 107.5 133 48.9
MSTRG.26866 Avicennia marina HOM05D000354 ORTHO05D000747 1.6e-21 106.7 133 51.9
Solyc01g095180.2 Solanum lycopersicum HOM05D000354 ORTHO05D000747 3.6e-21 105.5 105 56.2
PGSC0003DMG400000070 Solanum tuberosum HOM05D000354 ORTHO05D000747 3.6e-21 105.5 105 56.2
AL4G45410 Arabidopsis lyrata HOM05D000354 ORTHO05D000747 8.1e-21 104.4 93 63.4
Thhalv10001804m.g Eutrema salsugineum HOM05D000354 ORTHO05D000747 8.1e-21 104.4 96 60.4
AT2G46160 Arabidopsis thaliana HOM05D000354 ORTHO05D000747 1.1e-20 104.0 93 63.4
Duzib133G0009 Durio zibethinus HOM05D000354 ORTHO05D000747 1.1e-20 104.0 97 60.8
Carub.0004s2884 Capsella rubella HOM05D000354 ORTHO05D000747 1.8e-20 103.2 131 51.1
Oeu015215.1 Olea europaea HOM05D000354 ORTHO05D000747 3.1e-20 102.4 100 59.0
Nn7g37311 Nelumbo nucifera HOM05D000354 ORTHO05D000747 4.0e-20 102.1 107 57.0
A04p34300 Brassica napus HOM05D000354 ORTHO05D000747 6.8e-20 101.3 97 57.7
BraA04t18891Z Brassica rapa HOM05D000354 ORTHO05D000747 6.8e-20 101.3 97 57.7
Thecc.01G351500 Theobroma cacao HOM05D000354 ORTHO05D000747 6.8e-20 101.3 97 62.9
ATR1131G009 Amborella trichopoda HOM05D000354 ORTHO05D000747 1.2e-19 100.5 98 60.2
CARHR141440 Cardamine hirsuta HOM05D000354 ORTHO05D000747 1.5e-19 100.1 96 55.2
PGR031G2160 Punica granatum HOM05D000354 ORTHO05D000747 2.0e-19 99.8 100 58.0
BcaC02g07025 Brassica carinata HOM05D000354 ORTHO05D000747 2.6e-19 99.4 97 56.7
Atru.chr5.570 Acer truncatum HOM05D000354 ORTHO05D000747 4.4e-19 98.6 107 55.1
Atru.chr5.589 Acer truncatum HOM05D000354 ORTHO05D000747 4.4e-19 98.6 107 55.1
Duzib138G0414 Durio zibethinus HOM05D000354 ORTHO05D000747 4.4e-19 98.6 96 61.5
Potri.002G165200 Populus trichocarpa HOM05D000354 ORTHO05D000747 9.8e-19 97.4 97 57.7
BcaC02g12498 Brassica carinata HOM05D000354 ORTHO05D000747 1.3e-18 97.1 96 58.3
A05p01650 Brassica napus HOM05D000354 ORTHO05D000747 1.3e-18 97.1 96 58.3
C04p01890 Brassica napus HOM05D000354 ORTHO05D000747 1.3e-18 97.1 96 58.3
BraA05t19161Z Brassica rapa HOM05D000354 ORTHO05D000747 1.3e-18 97.1 96 58.3
CiPaw.01G068500 Carya illinoinensis HOM05D000354 ORTHO05D000747 1.3e-18 97.1 114 52.6
Cc02_g38670 Coffea canephora HOM05D000354 ORTHO05D000747 1.3e-18 97.1 103 55.3
Manes.01G251800 Manihot esculenta HOM05D000354 ORTHO05D000747 1.3e-18 97.1 129 41.1
Nn1g01714 Nelumbo nucifera HOM05D000354 ORTHO05D000747 1.3e-18 97.1 112 53.6
Sabra02G0146300 Salix brachista HOM05D000354 ORTHO05D000747 2.9e-18 95.9 101 55.4
Migut.N01468 Erythranthe guttata HOM05D000354 ORTHO05D000747 3.7e-18 95.5 111 53.2
RcHm_v2.0_Chr1g0357831 Rosa chinensis HOM05D000354 ORTHO05D000747 6.4e-18 94.7 117 51.3
Sabra14G0066000 Salix brachista HOM05D000354 ORTHO05D000747 6.4e-18 94.7 97 56.7
BcaC02g12709 Brassica carinata HOM05D000354 ORTHO05D000747 1.1e-17 94.0 96 57.3
Gohir.A07G140300 Gossypium hirsutum HOM05D000354 ORTHO05D000747 1.1e-17 94.0 92 59.8
Potri.014G091000 Populus trichocarpa HOM05D000354 ORTHO05D000747 1.9e-17 93.2 97 55.7
SalBow5G3442 Salvia bowleyana HOM05D026340 ORTHO05D030566 1.9e-17 93.2 130 51.5
CiPaw.02G035900 Carya illinoinensis HOM05D000354 ORTHO05D000747 3.2e-17 92.4 116 47.4
Gorai.008G119400 Gossypium raimondii HOM05D000354 ORTHO05D000747 3.2e-17 92.4 120 49.2
TAR375G0907 Trochodendron aralioides HOM05D000354 ORTHO05D000747 3.2e-17 92.4 116 49.1
Cpa.g.sc11.63 Carica papaya HOM05D000354 ORTHO05D000747 4.1e-17 92.0 106 51.9
Sp4g28220 Schrenkiella parvula HOM05D000354 ORTHO05D000747 4.1e-17 92.0 96 55.2
Gohir.A12G106400 Gossypium hirsutum HOM05D000354 ORTHO05D000747 7.1e-17 91.3 101 53.5
Lsat_1_v5_gn_4_34921 Lactuca sativa HOM05D000354 ORTHO05D000747 7.1e-17 91.3 95 55.8
Gohir.D07G145500 Gossypium hirsutum HOM05D000354 ORTHO05D000747 9.2e-17 90.9 93 60.2
Gohir.D12G110100 Gossypium hirsutum HOM05D000354 ORTHO05D000747 9.2e-17 90.9 99 53.5
Gorai.001G157500 Gossypium raimondii HOM05D000354 ORTHO05D000747 1.2e-16 90.5 92 58.7
Hma1.2p1_0623F.1_g191140 Hydrangea macrophylla HOM05D000354 ORTHO05D000747 1.2e-16 90.5 126 43.7
Manes.05G028500 Manihot esculenta HOM05D000354 ORTHO05D000747 1.2e-16 90.5 100 50.0
SalBow5G2735 Salvia bowleyana HOM05D026340 ORTHO05D030566 1.6e-16 90.1 100 54.0
Actinidia02816 Actinidia chinensis HOM05D000354 ORTHO05D000747 2.7e-16 89.4 93 55.9
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 3.5e-16 89.0 96 53.1
Phvul.008G057200 Phaseolus vulgaris HOM05D000354 ORTHO05D000747 3.5e-16 89.0 110 48.2
Aqoxy7G00176 Aquilegia oxysepala HOM05D000354 ORTHO05D000747 4.6e-16 88.6 96 53.1
Hma1.2p1_0335F.1_g128820 Hydrangea macrophylla HOM05D000354 ORTHO05D000747 4.6e-16 88.6 96 54.2
Hma1.2p1_1959F.1_g309075 Hydrangea macrophylla HOM05D000354 ORTHO05D000747 4.6e-16 88.6 96 54.2
MBI06_g33542_MAGBIO Magnolia biondii HOM05D001976 ORTHO05D000747 6.0e-16 88.2 107 49.5
Gohir.A11G092800 Gossypium hirsutum HOM05D000354 ORTHO05D000747 7.8e-16 87.8 96 55.2
Gohir.D11G097600 Gossypium hirsutum HOM05D000354 ORTHO05D000747 7.8e-16 87.8 96 55.2
Gorai.007G103900 Gossypium raimondii HOM05D000354 ORTHO05D000747 7.8e-16 87.8 96 55.2
Nitab4.5_0000915g0060 Nicotiana tabacum HOM05D000830 ORTHO05D003205 7.8e-16 87.8 88 53.4
GSVIVG01026978001 Vitis vinifera HOM05D000354 ORTHO05D000747 7.8e-16 87.8 98 50.0
CANSAT94G0018 Cannabis sativa HOM05D000354 ORTHO05D000747 1.0e-15 87.4 104 48.1
Ca_03493_v3 Cicer arietinum L. HOM05D000354 ORTHO05D000747 1.7e-15 86.7 93 49.5
FAN03G2540 Fragaria x ananassa HOM05D000354 ORTHO05D000747 1.7e-15 86.7 105 52.4
unitig_578.g16485 Utricularia gibba HOM05D000354 ORTHO05D000747 2.3e-15 86.3 68 73.5
Dinv43869 Davidia involucrata HOM05D000354 ORTHO05D000747 3.0e-15 85.9 98 53.1
TAR374G1283 Trochodendron aralioides HOM05D000354 ORTHO05D000747 3.9e-15 85.5 107 45.8
unitig_52.g17060 Utricularia gibba HOM05D000354 ORTHO05D000747 3.9e-15 85.5 89 51.7
FAN10G0199 Fragaria x ananassa HOM05D000830 ORTHO05D003205 5.1e-15 85.1 104 51.0
FAN10G3009 Fragaria x ananassa HOM05D000354 ORTHO05D000747 5.1e-15 85.1 104 51.0
TAR629G2798 Trochodendron aralioides HOM05D000354 ORTHO05D000747 5.1e-15 85.1 104 47.1
BcaC07g42672 Brassica carinata HOM05D000354 ORTHO05D000747 6.6e-15 84.7 97 47.4
Gohir.D08G149100 Gossypium hirsutum HOM05D000354 ORTHO05D000747 6.6e-15 84.7 98 54.1
Gorai.004G154800 Gossypium raimondii HOM05D000354 ORTHO05D000747 6.6e-15 84.7 98 54.1
BcaB02g08161 Brassica carinata HOM05D000354 ORTHO05D000747 8.6e-15 84.3 97 51.5
BcaC07g40652 Brassica carinata HOM05D000354 ORTHO05D000747 8.6e-15 84.3 91 52.7
C08p36400 Brassica napus HOM05D000354 ORTHO05D000747 8.6e-15 84.3 91 52.7
BolC8t51223H Brassica oleracea HOM05D000354 ORTHO05D000747 8.6e-15 84.3 91 52.7
QL04p055856 Quercus lobata HOM05D000354 ORTHO05D000747 8.6e-15 84.3 101 46.5
Lsat_1_v5_gn_7_2581 Lactuca sativa HOM05D000830 ORTHO05D003205 1.1e-14 84.0 94 52.1
A09p53620 Brassica napus HOM05D000354 ORTHO05D000747 1.5e-14 83.6 96 47.9
BraA09t40783Z Brassica rapa HOM05D000354 ORTHO05D000747 1.5e-14 83.6 96 47.9
Medtr8g028465 Medicago truncatula HOM05D000354 ORTHO05D000747 1.9e-14 83.2 95 51.6
TWI14G0186 Tripterygium wilfordii HOM05D000354 ORTHO05D000747 1.9e-14 83.2 98 55.1
arahy.Tifrunner.gnm1.ann1.3CXU30 Arachis hypogaea HOM05D000354 ORTHO05D000747 2.5e-14 82.8 98 50.0
arahy.Tifrunner.gnm1.ann1.LL93J9 Arachis hypogaea HOM05D000354 ORTHO05D000747 2.5e-14 82.8 98 50.0
MD07G1130500 Malus domestica HOM05D000830 ORTHO05D003205 5.6e-14 81.6 97 49.5
Aa31LG1G27550 Aethionema arabicum HOM05D000354 ORTHO05D000747 7.3e-14 81.3 93 57.0
Glyma.16G030900 Glycine max HOM05D000354 ORTHO05D000747 7.3e-14 81.3 93 47.3
FvH4_7g15500 Fragaria vesca HOM05D000354 ORTHO05D000747 1.2e-13 80.5 103 47.6
FAN06G0928 Fragaria x ananassa HOM05D000354 ORTHO05D000747 1.2e-13 80.5 103 47.6
FAN06G2870 Fragaria x ananassa HOM05D000830 ORTHO05D003205 1.2e-13 80.5 103 47.6
HPP92_011503 Vanilla planifolia HOM05D000354 ORTHO05D000747 1.2e-13 80.5 93 49.5
Psat4g158000 Pisum sativum HOM05D000354 ORTHO05D000747 1.6e-13 80.1 107 43.9
SHI13362 Sapria himalayana HOM05D000354 ORTHO05D000747 1.6e-13 80.1 100 46.0
CsaV3_3G008560 Cucumis sativus L. HOM05D000354 ORTHO05D000747 2.1e-13 79.7 91 50.5
VMungo1383G1513 Vigna mungo HOM05D000354 ORTHO05D000747 2.8e-13 79.3 107 48.6
Carub.0005s2824 Capsella rubella HOM05D000354 ORTHO05D000747 3.6e-13 79.0 96 49.0
A04p01040 Brassica napus HOM05D000354 ORTHO05D000747 4.7e-13 78.6 98 48.0
BraA04t15821Z Brassica rapa HOM05D000354 ORTHO05D000747 4.7e-13 78.6 98 48.0
HanXRQChr16g0523261 Helianthus annuus HOM05D000354 ORTHO05D000747 6.2e-13 78.2 103 46.6
Phvul.010G105200 Phaseolus vulgaris HOM05D000354 ORTHO05D000747 6.2e-13 78.2 97 49.5
VMungo0331G0973 Vigna mungo HOM05D000354 ORTHO05D000747 6.2e-13 78.2 94 47.9
BcaC07g42683 Brassica carinata HOM05D000354 ORTHO05D000747 8.1e-13 77.8 95 47.4
CDE10G0984 Ceratophyllum demersum HOM05D000354 ORTHO05D000747 1.4e-12 77.0 91 44.0
MD01G1072300 Malus domestica HOM05D000354 ORTHO05D000747 6.8e-12 74.7 99 46.5
Rhsim01G0165900 Rhododendron simsii HOM05D000354 ORTHO05D000747 8.9e-12 74.3 95 50.5
CARHR171870 Cardamine hirsuta HOM05D000354 ORTHO05D000747 1.5e-11 73.6 88 50.0
CDE03G0034 Ceratophyllum demersum HOM05D000354 ORTHO05D000747 1.5e-11 73.6 95 46.3
Nitab4.5_0009823g0010 Nicotiana tabacum HOM05D000354 ORTHO05D000747 1.5e-11 73.6 49 69.4
Sed0022081 Sechium edule HOM05D000354 ORTHO05D000747 1.5e-11 73.6 78 55.1
Sp5g01860 Schrenkiella parvula HOM05D000354 ORTHO05D000747 2.6e-11 72.8 85 48.2
BcaC07g40670 Brassica carinata HOM05D000354 ORTHO05D000747 3.4e-11 72.4 89 50.6
Thhalv10006504m.g Eutrema salsugineum HOM05D000354 ORTHO05D000747 3.4e-11 72.4 83 49.4
Glyma.09G253500 Glycine max HOM05D000354 ORTHO05D000747 4.4e-11 72.0 92 47.8
SEGI_16938 Sequoiadendron giganteum HOM05D000354 ORTHO05D000747 4.4e-11 72.0 94 41.5
AL5G43920 Arabidopsis lyrata HOM05D000354 ORTHO05D000747 5.8e-11 71.6 85 49.4
Lalb_Chr10g0096591 Lupinus albus HOM05D000830 ORTHO05D003205 5.8e-11 71.6 105 41.0
Psat0s631g0040 Pisum sativum HOM05D000354 ORTHO05D000747 5.8e-11 71.6 105 38.1
SalBow6G0515 Salvia bowleyana HOM05D026340 ORTHO05D030566 9.9e-11 70.9 83 53.0
MSTRG.4832 Avicennia marina HOM05D000354 ORTHO05D000747 2.2e-10 69.7 80 51.2
Zm00001eb206640 Zea mays HOM05D000783 ORTHO05D014922 3.8e-10 68.9 128 40.6
Zm00001eb293470 Zea mays HOM05D000354 ORTHO05D000747 3.8e-10 68.9 116 39.7
Zm00001eb409590 Zea mays HOM05D000354 ORTHO05D000747 3.8e-10 68.9 128 40.6
EL10Ac1g00348 Beta vulgaris HOM05D000354 ORTHO05D000747 4.9e-10 68.6 98 44.9
SalBow5G0437 Salvia bowleyana HOM05D026340 ORTHO05D030566 4.9e-10 68.6 72 56.9
Os01g0736600 Oryza sativa ssp. japonica HOM05D000354 ORTHO05D000747 6.4e-10 68.2 100 45.0
AT3G61550 Arabidopsis thaliana HOM05D000354 ORTHO05D000747 8.4e-10 67.8 84 47.6
vmacro22845 Vaccinium macrocarpon HOM05D000830 ORTHO05D003205 8.4e-10 67.8 121 38.0
SGA_v2.0_scaffold11G05689 Striga asiatica HOM05D000354 ORTHO05D000747 1.4e-09 67.0 106 40.6
MELO3C006076.2 Cucumis melo HOM05D000354 ORTHO05D000747 1.9e-09 66.6 79 46.8
Os05g0526600 Oryza sativa ssp. japonica HOM05D000354 ORTHO05D000747 1.9e-09 66.6 117 40.2
PSO135G0381 Papaver somniferum HOM05D000354 ORTHO05D000747 2.4e-09 66.2 92 41.3
Zm00001eb153950 Zea mays HOM05D000354 ORTHO05D000747 2.4e-09 66.2 105 42.9
Zm00001eb413840 Zea mays HOM05D000354 ORTHO05D000747 4.1e-09 65.5 108 42.6
Zm00001eb273080 Zea mays HOM05D000783 ORTHO05D000747 5.4e-09 65.1 113 40.7
Zm00001eb313170 Zea mays HOM05D000783 ORTHO05D000747 5.4e-09 65.1 113 40.7
Zm00001eb341190 Zea mays HOM05D000783 ORTHO05D014922 5.4e-09 65.1 113 40.7
Zm00001eb371600 Zea mays HOM05D000783 ORTHO05D000747 5.4e-09 65.1 113 40.7
TPR.G32029 Trifolium pratense HOM05D000354 ORTHO05D000747 9.2e-09 64.3 103 36.9
Medtr7g079280 Medicago truncatula HOM05D000354 ORTHO05D000747 1.2e-08 63.9 103 37.9
Zm00001eb371270 Zea mays HOM05D000354 ORTHO05D000747 2.1e-08 63.2 103 41.7
ClCG01G015050 Citrullus lanatus HOM05D000354 ORTHO05D000747 2.7e-08 62.8 122 36.9
DCAR_008640 Daucus carota HOM05D000354 ORTHO05D000747 3.5e-08 62.4 94 46.8
THA.LOC104827607 Tarenaya hassleriana HOM05D000354 ORTHO05D000747 3.5e-08 62.4 97 41.2
Zm00001eb398960 Zea mays HOM05D000354 ORTHO05D000747 3.5e-08 62.4 108 41.7
Lj3g0024181 Lotus japonicus HOM05D000354 ORTHO05D000747 7.8e-08 61.2 83 41.0
Prupe.2G178600 Prunus persica HOM05D000354 ORTHO05D000747 7.8e-08 61.2 96 41.7
PSO384G4445 Papaver somniferum HOM05D000354 ORTHO05D000747 1.7e-07 60.1 105 36.2
Sed0010026 Sechium edule HOM05D000354 ORTHO05D000747 3.0e-07 59.3 81 46.9
Mapoly0187s0012 Marchantia polymorpha HOM05D000354 ORTHO05D000747 3.9e-07 58.9 118 33.9
THA.LOC104826794 Tarenaya hassleriana HOM05D000354 ORTHO05D000747 3.9e-07 58.9 112 32.1
Thhalv10015385m.g Eutrema salsugineum HOM05D000354 ORTHO05D000747 6.6e-07 58.2 114 29.8
AT5G06490 Arabidopsis thaliana HOM05D000354 ORTHO05D000747 5.6e-06 55.1 112 32.1
DCAR_006951 Daucus carota HOM05D000354 ORTHO05D000747 5.6e-06 55.1 92 44.6
Glyma.07G062800 Glycine max HOM05D000354 ORTHO05D000747 5.6e-06 55.1 93 36.6
MBI07_g11738_MAGBIO Magnolia biondii HOM05D000830 ORTHO05D003205 5.6e-06 55.1 96 32.3
AL6G16580 Arabidopsis lyrata HOM05D000354 ORTHO05D000747 7.3e-06 54.7 112 33.0
MELO3C024590.2 Cucumis melo HOM05D000354 ORTHO05D000747 7.3e-06 54.7 107 34.6
CsaV3_6G041160 Cucumis sativus L. HOM05D000354 ORTHO05D000747 7.3e-06 54.7 107 34.6
TPR.G18146 Trifolium pratense HOM05D000830 ORTHO05D003205 9.6e-06 54.3 97 36.1


User provided reference genes

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