Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3394 Utricularia gibba HOM05D003942 ORTHO05D004527 2.8e-241 838.2 424 100.0
MSTRG.4859 Avicennia marina HOM05D003942 ORTHO05D004527 1.2e-143 513.8 426 64.6
Dinv32469 Davidia involucrata HOM05D003942 ORTHO05D004527 5.0e-137 491.9 411 63.0
CSS0041241 Camellia sinensis var. sinensis HOM05D003942 ORTHO05D004527 6.1e-135 485.0 409 61.6
CSS0049620 Camellia sinensis var. sinensis HOM05D003942 ORTHO05D004527 7.9e-135 484.6 409 61.6
SGA_v2.0_scaffold43G16422 Striga asiatica HOM05D003942 ORTHO05D004527 1.3e-132 477.2 403 64.0
TAR629G1832 Trochodendron aralioides HOM05D003942 ORTHO05D004527 1.7e-132 476.9 412 63.3
SalBow5G2271 Salvia bowleyana HOM05D003942 ORTHO05D004527 6.3e-132 474.9 397 62.7
Migut.N01440 Erythranthe guttata HOM05D003942 ORTHO05D004527 1.1e-131 474.2 413 59.8
QL08p049021 Quercus lobata HOM05D003942 ORTHO05D004527 2.4e-131 473.0 401 60.6
CANSAT56G2580 Cannabis sativa HOM05D003942 ORTHO05D004527 7.0e-131 471.5 393 62.1
Thecc.01G360500 Theobroma cacao HOM05D003942 ORTHO05D004527 5.9e-130 468.4 345 67.2
Actinidia10022 Actinidia chinensis HOM05D003942 ORTHO05D004527 7.7e-130 468.0 401 60.3
Peaxi162Scf00191g01422 Petunia axillaris HOM05D003942 ORTHO05D004527 7.7e-130 468.0 406 60.1
Prupe.2G168100 Prunus persica HOM05D003942 ORTHO05D004527 1.0e-129 467.6 371 63.6
Cfa003938 Carpinus fangiana HOM05D003942 ORTHO05D004527 1.7e-129 466.8 415 59.5
Nitab4.5_0008050g0040 Nicotiana tabacum HOM05D003942 ORTHO05D004527 2.9e-129 466.1 405 60.5
Gorai.007G098800 Gossypium raimondii HOM05D003942 ORTHO05D004527 3.8e-129 465.7 410 58.8
RcHm_v2.0_Chr1g0355071 Rosa chinensis HOM05D003942 ORTHO05D004527 3.8e-129 465.7 411 59.6
THA.LOC104817290 Tarenaya hassleriana HOM05D003942 ORTHO05D004527 6.5e-129 464.9 378 63.5
Rhsim07G0016400 Rhododendron simsii HOM05D003942 ORTHO05D004527 8.5e-129 464.5 407 60.4
MD01G1057600 Malus domestica HOM05D003942 ORTHO05D004527 1.1e-128 464.2 398 62.1
Duzib133G0298 Durio zibethinus HOM05D003942 ORTHO05D004527 1.4e-128 463.8 406 60.8
Eucgr.E00157 Eucalyptus grandis HOM05D003942 ORTHO05D004527 1.9e-128 463.4 399 62.4
MD07G1139000 Malus domestica HOM05D003942 ORTHO05D004527 2.5e-128 463.0 368 64.4
Ciclev10020374m.g Citrus clementina HOM05D003942 ORTHO05D004527 4.2e-128 462.2 392 63.0
CiPaw.02G030000 Carya illinoinensis HOM05D003942 ORTHO05D004527 7.2e-128 461.5 343 67.1
FvH4_7g14170 Fragaria vesca HOM05D003942 ORTHO05D004527 7.2e-128 461.5 390 61.5
TAR375G0209 Trochodendron aralioides HOM05D003942 ORTHO05D004527 9.4e-128 461.1 404 60.9
Atru.chr5.464 Acer truncatum HOM05D003942 ORTHO05D004527 1.2e-127 460.7 424 60.4
FAN03G2475 Fragaria x ananassa HOM05D003942 ORTHO05D004527 1.2e-127 460.7 381 61.9
Gohir.A11G088200 Gossypium hirsutum HOM05D003942 ORTHO05D004527 1.2e-127 460.7 410 58.3
Aa31LG10G15570 Aethionema arabicum HOM05D003942 ORTHO05D004527 1.6e-127 460.3 359 66.3
FAN06G2309 Fragaria x ananassa HOM05D003942 ORTHO05D004527 1.6e-127 460.3 390 61.3
Nitab4.5_0001702g0090 Nicotiana tabacum HOM05D003942 ORTHO05D004527 1.6e-127 460.3 403 61.0
Cpa.g.sc18.243 Carica papaya HOM05D003942 ORTHO05D004527 2.7e-127 459.5 406 60.6
FAN01G0250 Fragaria x ananassa HOM05D003942 ORTHO05D004527 2.7e-127 459.5 390 61.3
CAN.G399.13 Capsicum annuum HOM05D003942 ORTHO05D004527 3.6e-127 459.1 363 62.8
A04p01160 Brassica napus HOM05D003942 ORTHO05D004527 4.7e-127 458.8 383 62.4
BraA04t15833Z Brassica rapa HOM05D003942 ORTHO05D004527 4.7e-127 458.8 383 62.4
FAN06G3470 Fragaria x ananassa HOM05D003942 ORTHO05D004527 8.0e-127 458.0 390 61.3
BcaC07g40631 Brassica carinata HOM05D003942 ORTHO05D004527 1.4e-126 457.2 354 65.5
COL.COLO4_12700 Corchorus olitorius HOM05D003942 ORTHO05D004527 1.8e-126 456.8 346 65.6
Sp5g02060 Schrenkiella parvula HOM05D003942 ORTHO05D004527 2.3e-126 456.4 354 65.5
FAN10G4090 Fragaria x ananassa HOM05D003942 ORTHO05D004527 3.0e-126 456.1 390 61.3
Sopen05g028240 Solanum pennellii HOM05D003942 ORTHO05D004527 3.9e-126 455.7 387 60.5
C04p31390 Brassica napus HOM05D003942 ORTHO05D004527 5.2e-126 455.3 399 59.4
Solyc05g049900.3 Solanum lycopersicum HOM05D003942 ORTHO05D004527 5.2e-126 455.3 387 60.5
BolC4t24688H Brassica oleracea HOM05D003942 ORTHO05D004527 6.7e-126 454.9 398 59.5
CDE09G0298 Ceratophyllum demersum HOM05D003942 ORTHO05D004527 1.1e-125 454.1 360 61.9
Cc02_g37870 Coffea canephora HOM05D003942 ORTHO05D004527 1.1e-125 454.1 379 59.6
PGSC0003DMG400021644 Solanum tuberosum HOM05D003942 ORTHO05D004527 1.5e-125 453.8 363 62.5
Thhalv10006010m.g Eutrema salsugineum HOM05D003942 ORTHO05D004527 2.6e-125 453.0 351 65.0
Lj9A582T85 Lonicera japonica HOM05D003942 ORTHO05D004527 2.6e-125 453.0 465 53.1
AL5G43590 Arabidopsis lyrata HOM05D003942 ORTHO05D004527 7.4e-125 451.4 354 65.5
MBI18_g25515_MAGBIO Magnolia biondii HOM05D003942 ORTHO05D004527 1.3e-124 450.7 417 58.0
TWI23G1005 Tripterygium wilfordii HOM05D003942 ORTHO05D004527 1.3e-124 450.7 411 58.9
A09p53400 Brassica napus HOM05D003942 ORTHO05D004527 3.7e-124 449.1 354 63.6
Carub.0005s2799 Capsella rubella HOM05D003942 ORTHO05D004527 3.7e-124 449.1 392 61.5
Sabra14G0060100 Salix brachista HOM05D003942 ORTHO05D004527 4.8e-124 448.7 367 61.0
PGR042G2566 Punica granatum HOM05D003942 ORTHO05D004527 6.3e-124 448.4 406 58.6
C08p36210 Brassica napus HOM05D003942 ORTHO05D004527 1.1e-123 447.6 354 64.1
BolC8t51203H Brassica oleracea HOM05D003942 ORTHO05D004527 1.1e-123 447.6 354 64.1
CiPaw.01G059900 Carya illinoinensis HOM05D003942 ORTHO05D004527 3.1e-123 446.0 410 59.5
Potri.014G082900 Populus trichocarpa HOM05D003942 ORTHO05D004527 3.1e-123 446.0 390 59.5
Oeu020562.1 Olea europaea HOM05D003942 ORTHO05D004527 4.1e-123 445.7 324 69.4
TWI59G0555 Tripterygium wilfordii HOM05D003942 ORTHO05D004527 4.1e-123 445.7 393 59.0
HanXRQChr16g0522811 Helianthus annuus HOM05D003942 ORTHO05D004527 5.3e-123 445.3 379 62.3
Manes.05G036000 Manihot esculenta HOM05D003942 ORTHO05D004527 5.3e-123 445.3 344 65.1
GSVIVG01026895001 Vitis vinifera HOM05D003942 ORTHO05D004527 9.1e-123 444.5 334 67.7
BraA09t40766Z Brassica rapa HOM05D003942 ORTHO05D004527 2.0e-122 443.4 354 62.7
Lsat_1_v5_gn_4_36221 Lactuca sativa HOM05D003942 ORTHO05D004527 3.5e-122 442.6 428 57.0
Lsat_1_v5_gn_3_137060 Lactuca sativa HOM05D003942 ORTHO05D004527 4.5e-122 442.2 421 57.0
Haze_15488 Corylus avellana HOM05D003942 ORTHO05D004527 3.8e-121 439.1 418 57.2
HanXRQChr13g0426521 Helianthus annuus HOM05D003942 ORTHO05D004527 5.0e-121 438.7 385 60.0
Hund27285 Selenicereus undatus HOM05D003942 ORTHO05D004527 5.0e-121 438.7 413 57.1
BcaC02g10219 Brassica carinata HOM05D003942 ORTHO05D004527 6.5e-121 438.3 399 59.1
Thhalv10001467m.g Eutrema salsugineum HOM05D003942 ORTHO05D004527 6.5e-121 438.3 345 63.2
DCAR_015969 Daucus carota HOM05D003942 ORTHO05D004527 8.5e-121 438.0 404 57.7
BraA04t18872Z Brassica rapa HOM05D003942 ORTHO05D004527 2.5e-120 436.4 367 60.5
Lalb_Chr03g0038211 Lupinus albus HOM05D003942 ORTHO05D004527 4.2e-120 435.6 411 55.2
Sp4g27940 Schrenkiella parvula HOM05D003942 ORTHO05D004527 7.2e-120 434.9 345 62.9
VMungo0331G0006 Vigna mungo HOM05D003942 ORTHO05D004527 7.2e-120 434.9 355 61.7
Aqoxy5G04009 Aquilegia oxysepala HOM05D003942 ORTHO05D004527 9.4e-120 434.5 415 56.9
C04p71910 Brassica napus HOM05D003942 ORTHO05D004527 9.4e-120 434.5 375 60.3
Aa31LG1G27300 Aethionema arabicum HOM05D003942 ORTHO05D004527 1.6e-119 433.7 364 61.8
BolC4t28689H Brassica oleracea HOM05D003942 ORTHO05D004527 2.1e-119 433.3 375 60.5
AL4G45080 Arabidopsis lyrata HOM05D003942 ORTHO05D004527 2.7e-119 433.0 384 57.8
CARHR141140 Cardamine hirsuta HOM05D003942 ORTHO05D004527 2.7e-119 433.0 370 59.5
AUR62004344 Chenopodium quinoa HOM05D003942 ORTHO05D004527 2.7e-119 433.0 344 59.9
Ah.05g180690 Amaranthus hybridus HOM05D003942 ORTHO05D004527 3.6e-119 432.6 416 55.5
Carub.0004s2857 Capsella rubella HOM05D003942 ORTHO05D004527 4.7e-119 432.2 355 61.1
BcaC09g52244 Brassica carinata HOM05D003942 ORTHO05D004527 8.0e-119 431.4 385 58.4
Lj3g0006137 Lotus japonicus HOM05D003942 ORTHO05D004527 8.0e-119 431.4 418 55.3
A04p34110 Brassica napus HOM05D003942 ORTHO05D004527 1.0e-118 431.0 367 60.2
arahy.Tifrunner.gnm1.ann1.2H0UDK Arachis hypogaea HOM05D003942 ORTHO05D004527 1.4e-118 430.6 423 54.1
AUR62022550 Chenopodium quinoa HOM05D003942 ORTHO05D004527 2.3e-118 429.9 344 59.6
arahy.Tifrunner.gnm1.ann1.Q5YAPI Arachis hypogaea HOM05D003942 ORTHO05D004527 5.2e-118 428.7 420 54.3
Glyma.07G071900 Glycine max HOM05D003942 ORTHO05D004527 1.2e-117 427.6 404 55.7
BcaC02g07065 Brassica carinata HOM05D003942 ORTHO05D004527 1.5e-117 427.2 374 59.9
Lalb_Chr04g0256871 Lupinus albus HOM05D003942 ORTHO05D004527 1.5e-117 427.2 340 61.5
Psat4g154400 Pisum sativum HOM05D003942 ORTHO05D004527 9.7e-117 424.5 395 56.2
Glyma.03G010800 Glycine max HOM05D003942 ORTHO05D004527 2.2e-116 423.3 350 59.7
Phvul.010G097300 Phaseolus vulgaris HOM05D003942 ORTHO05D004527 2.2e-116 423.3 385 57.1
Sc23g0002980 Simmondsia chinensis HOM05D003942 ORTHO05D004527 3.7e-116 422.5 378 59.0
Ca_23643_v3 Cicer arietinum L. HOM05D003942 ORTHO05D004527 9.1e-115 417.9 355 58.3
ECA240G2096 Erigeron canadensis HOM05D003942 ORTHO05D004527 1.8e-110 403.7 344 61.3
TPR.G15979 Trifolium pratense HOM05D003942 ORTHO05D004527 3.0e-110 402.9 327 60.6
Medtr8g031000 Medicago truncatula HOM05D003942 ORTHO05D004527 9.8e-109 397.9 336 59.5
Os03g0106000 Oryza sativa ssp. japonica HOM05D003942 ORTHO05D004527 3.7e-108 396.0 372 58.1
AT2G45870 Arabidopsis thaliana HOM05D003942 ORTHO05D004527 9.1e-107 391.3 314 62.1
HPP92_006558 Vanilla planifolia HOM05D003942 ORTHO05D004527 2.1e-103 380.2 359 55.7
Zm00001eb000510 Zea mays HOM05D003942 ORTHO05D004527 3.0e-102 376.3 374 55.1
SEGI_25793 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 9.8e-101 371.3 382 52.4
Pp3c4_15850 Physcomitrium patens HOM05D003942 ORTHO05D004527 2.2e-100 370.2 331 55.6
EL10Ac1g00428 Beta vulgaris HOM05D003942 ORTHO05D004527 3.7e-100 369.4 307 59.9
Pp3c3_22870 Physcomitrium patens HOM05D003942 ORTHO05D004527 5.9e-98 362.1 331 53.5
ECA234G1137 Erigeron canadensis HOM05D003942 ORTHO05D004527 7.3e-96 355.1 293 63.5
SEGI_35716 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 5.2e-94 349.0 329 54.1
Mapoly0071s0037 Marchantia polymorpha HOM05D003942 ORTHO05D004527 1.4e-91 340.9 326 52.5
Nn1g01512 Nelumbo nucifera HOM05D003942 ORTHO05D004527 2.1e-87 327.0 414 48.6
Duzib138G1448 Durio zibethinus HOM05D003942 ORTHO05D004527 3.1e-86 323.2 408 48.0
SMO364G0338 Selaginella moellendorffii HOM05D003942 ORTHO05D004527 8.9e-86 321.6 316 49.1
Gohir.D11G092500 Gossypium hirsutum HOM05D003942 ORTHO05D004527 1.9e-80 303.9 285 56.8
AT3G61320 Arabidopsis thaliana HOM05D003942 ORTHO05D004527 1.4e-78 297.7 225 66.2
vmacro13277 Vaccinium macrocarpon HOM05D003942 ORTHO05D004527 2.3e-73 280.4 423 40.7
Mapoly0009s0131 Marchantia polymorpha HOM05D003942 ORTHO05D004527 5.6e-72 275.8 307 43.0
AagrBONN_evm.TU.Sc2ySwM_344.3805 Anthoceros agrestis HOM05D003942 ORTHO05D004527 2.0e-69 267.3 325 43.1
AagrBONN_evm.TU.Sc2ySwM_228.958 Anthoceros agrestis HOM05D003942 ORTHO05D004527 2.6e-69 266.9 297 45.8
Pp3c2_13700 Physcomitrium patens HOM05D003942 ORTHO05D004527 4.9e-68 262.7 310 45.5
ATR0680G085 Amborella trichopoda HOM05D003942 ORTHO05D004527 1.2e-66 258.1 334 44.6
Pp3c1_34560 Physcomitrium patens HOM05D003942 ORTHO05D004527 6.0e-66 255.8 297 42.8
Pp3c1_3670 Physcomitrium patens HOM05D003942 ORTHO05D004527 6.0e-66 255.8 294 42.9
Pp3c11_9440 Physcomitrium patens HOM05D003942 ORTHO05D004527 5.1e-65 252.7 306 39.2
Pp3c1_34600 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.9e-64 250.8 297 42.1
AagrBONN_evm.TU.Sc2ySwM_362.1957 Anthoceros agrestis HOM05D003942 ORTHO05D004527 2.1e-63 247.3 292 44.9
CBR_g44610 Chara braunii HOM05D000505 ORTHO05D000301 2.4e-62 243.8 328 40.2
FAN10G2852 Fragaria x ananassa HOM05D003942 ORTHO05D004527 2.4e-62 243.8 273 50.9
Pp3c6_24250 Physcomitrium patens HOM05D003942 ORTHO05D004527 4.0e-62 243.0 291 41.6
MD01G1202300 Malus domestica HOM05D003942 ORTHO05D004527 2.3e-57 227.3 244 52.9
CARHR171630 Cardamine hirsuta HOM05D003942 ORTHO05D004527 4.3e-56 223.0 171 68.4
Oeu020563.1 Olea europaea HOM05D003942 ORTHO05D004527 5.3e-54 216.1 149 73.8
Pp3c14_6660 Physcomitrium patens HOM05D003942 ORTHO05D004527 9.9e-53 211.8 296 36.8
HPP92_011356 Vanilla planifolia HOM05D003942 ORTHO05D004527 1.1e-51 208.4 155 64.5
C05p09980 Brassica napus HOM05D003942 ORTHO05D004527 4.8e-47 193.0 171 60.2
CBR_g772 Chara braunii HOM05D003942 ORTHO05D004527 4.0e-46 189.9 329 35.0
Cre16.g663450 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 1.2e-45 188.3 340 36.2
Cre06.g261750 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 3.4e-45 186.8 328 33.8
Cre16.g662600 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 3.4e-45 186.8 310 36.8
Cre16.g663400 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 2.9e-44 183.7 310 36.5
CBR_g38187 Chara braunii HOM05D003942 ORTHO05D004527 1.2e-42 178.3 218 42.7
Cre06.g277650 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 3.0e-41 173.7 336 32.7
AagrBONN_evm.TU.Sc2ySwM_228.2628 Anthoceros agrestis HOM05D003942 ORTHO05D004527 1.1e-40 171.8 152 51.3
FAN10G0144 Fragaria x ananassa HOM05D003942 ORTHO05D004527 9.6e-40 168.7 194 50.0
SEGI_34263 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 1.3e-39 168.3 158 55.1
Cre11.g474700 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 8.2e-39 165.6 334 31.4
HPP92_011355 Vanilla planifolia HOM05D003942 ORTHO05D004527 1.1e-38 165.2 139 61.2
Cre01.g038100 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 5.5e-35 152.9 309 30.4
PRCOL_00004040 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 1.9e-32 144.4 303 33.0
Cre07.g355300 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 8.2e-31 139.0 289 30.8
Oeu020564.1 Olea europaea HOM05D003942 ORTHO05D004527 1.4e-27 128.3 77 84.4
MCO01G232 Micromonas commoda HOM05D003942 ORTHO05D004527 3.2e-27 127.1 312 29.8
BcaB02g11262 Brassica carinata HOM05D003942 ORTHO05D004527 2.1e-26 124.4 119 52.1
PRCOL_00003097 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 3.9e-25 120.2 295 31.9
PRCOL_00003548 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 4.3e-24 116.7 312 28.8
Cre03.g199600 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 7.4e-24 115.9 218 32.1
FAN10G3156 Fragaria x ananassa HOM05D000449 ORTHO05D004527 1.7e-23 114.8 157 43.9
PRCOL_00005764 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 4.8e-23 113.2 317 30.0
Pp3c6_17920 Physcomitrium patens HOM05D003942 ORTHO05D004527 8.2e-23 112.5 149 38.3
PRCOL_00004398 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 2.4e-22 110.9 299 30.8
PRCOL_00006054 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 9.1e-22 109.0 304 30.3
MCO09G357 Micromonas commoda HOM05D003942 ORTHO05D004527 1.2e-21 108.6 365 27.7
Pp3c11_6680 Physcomitrium patens HOM05D003942 ORTHO05D004527 2.6e-21 107.5 103 50.5
SEGI_01331 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 1.7e-20 104.8 91 57.1
MCO01G007 Micromonas commoda HOM05D003942 ORTHO05D004527 3.8e-20 103.6 307 28.3
Pp3c3_14710 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.6e-10 71.6 143 32.9
PSO478G4509 Papaver somniferum HOM05D003942 ORTHO05D004527 1.1e-06 58.9 41 65.9


User provided reference genes

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