Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3352 Utricularia gibba HOM05D004656 ORTHO05D005404 7.8e-272 939.9 479 100.0
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 2.7e-179 632.5 514 65.8
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 1.0e-175 620.5 514 65.2
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 2.3e-175 619.4 514 65.0
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 6.0e-163 578.2 514 60.7
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 5.0e-162 575.1 506 59.9
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 4.3e-161 572.0 506 59.1
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 6.8e-159 564.7 482 60.8
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 3.4e-158 562.4 514 57.6
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 7.5e-158 561.2 514 57.4
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 7.1e-156 554.7 519 56.6
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 1.2e-155 553.9 511 55.8
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 1.6e-155 553.5 516 56.6
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 1.0e-154 550.8 515 55.1
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 2.3e-154 549.7 514 57.6
Ca_18486_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 8.6e-154 547.7 511 55.0
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 3.3e-153 545.8 515 55.0
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 5.6e-153 545.0 505 56.4
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 1.6e-152 543.5 512 57.2
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 2.1e-152 543.1 514 55.6
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 2.1e-152 543.1 514 57.6
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 2.8e-152 542.7 511 56.9
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 4.7e-152 542.0 522 54.2
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 1.4e-151 540.4 515 56.5
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 2.3e-151 539.7 518 56.4
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 2.3e-151 539.7 504 56.3
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 3.1e-151 539.3 513 56.7
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 8.9e-151 537.7 514 53.7
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 2.0e-150 536.6 507 55.2
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 2.6e-150 536.2 506 54.5
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 3.4e-150 535.8 507 55.6
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 7.6e-150 534.6 514 56.4
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 1.3e-149 533.9 514 57.2
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 2.2e-149 533.1 506 56.3
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 2.2e-149 533.1 514 57.0
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 3.7e-149 532.3 503 57.3
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 6.4e-149 531.6 504 56.7
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 1.1e-148 530.8 509 56.0
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 2.4e-148 529.6 529 55.8
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 2.4e-148 529.6 523 55.8
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.4e-148 528.5 485 58.8
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 7.1e-148 528.1 511 54.2
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 9.2e-148 527.7 510 55.3
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 1.2e-147 527.3 514 55.3
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 1.6e-147 526.9 511 52.3
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 2.1e-147 526.6 517 53.6
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 2.1e-147 526.6 514 55.1
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 2.7e-147 526.2 488 58.0
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 7.8e-147 524.6 536 50.9
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 6.6e-146 521.5 514 53.9
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 1.2e-144 517.3 512 54.7
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 1.4e-143 513.8 506 54.2
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 1.4e-143 513.8 506 54.7
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 1.8e-143 513.5 514 52.3
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 4.0e-143 512.3 514 52.3
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 6.8e-143 511.5 512 54.1
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 5.8e-142 508.4 514 54.9
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 7.6e-142 508.1 510 54.3
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 2.2e-141 506.5 511 53.2
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 2.9e-141 506.1 506 54.0
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 4.9e-141 505.4 507 53.6
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 4.9e-141 505.4 572 50.9
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 3.2e-140 502.7 488 56.1
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 4.2e-140 502.3 513 54.4
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 2.7e-139 499.6 485 54.6
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 2.3e-138 496.5 516 53.5
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 1.1e-137 494.2 511 51.1
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 1.1e-137 494.2 507 53.6
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 1.5e-137 493.8 512 53.5
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 3.3e-137 492.7 511 51.3
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 1.6e-136 490.3 499 52.5
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 1.6e-136 490.3 507 50.9
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 4.8e-136 488.8 514 50.8
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 1.8e-135 486.9 609 46.5
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 3.1e-135 486.1 514 50.0
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 3.1e-135 486.1 507 51.1
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 6.9e-135 485.0 514 49.6
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 1.2e-134 484.2 514 49.6
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 1.5e-134 483.8 514 49.8
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 5.8e-134 481.9 514 49.8
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 1.3e-133 480.7 514 49.6
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 8.4e-133 478.0 514 51.2
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 3.2e-132 476.1 511 49.7
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 8.7e-130 468.0 479 53.2
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 9.9e-126 454.5 539 46.6
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 1.1e-124 451.1 517 48.2
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 1.8e-122 443.7 480 49.6
Hma1.2p1_1241F.1_g269840 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 2.4e-119 433.3 470 53.0
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 2.5e-116 423.3 509 46.6
AL7G32520 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 1.2e-115 421.0 530 45.1
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 7.4e-113 411.8 513 45.2
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 2.7e-99 366.7 349 57.6
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 7.0e-87 325.5 484 41.9
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 5.5e-84 315.8 253 61.7
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 5.9e-78 295.8 243 60.9
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 4.1e-71 273.1 521 35.5
Eucgr.C00026 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.7e-69 267.7 192 67.2
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.5e-68 264.6 185 68.1
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 1.2e-67 261.5 523 34.6
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 5.2e-66 256.1 183 68.9
Hund23621 Selenicereus undatus HOM05D004656 ORTHO05D005404 2.6e-65 253.8 392 39.3
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 1.7e-56 224.6 490 33.7
SEGI_33901 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 3.9e-53 213.4 396 34.1
arahy.Tifrunner.gnm1.ann1.QWV34J Arachis hypogaea HOM05D004656 ORTHO05D005404 2.6e-49 200.7 232 44.4
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 3.4e-49 200.3 194 53.6
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.8e-43 180.6 134 64.9
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 3.6e-43 180.3 194 49.5
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 2.7e-38 164.1 243 36.6
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 3.5e-38 163.7 189 47.6
QL02p031126 Quercus lobata HOM05D004656 ORTHO05D005404 4.3e-36 156.8 146 58.9
Hund23620 Selenicereus undatus HOM05D004656 ORTHO05D005404 3.0e-29 134.0 86 72.1
SEGI_08767 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 9.9e-25 119.0 131 48.1
EL10Ac6g14063 Beta vulgaris HOM05D004656 ORTHO05D005404 2.9e-24 117.5 90 66.7
SHI02121 Sapria himalayana HOM05D004656 ORTHO05D005404 3.2e-23 114.0 255 31.4
EL10Ac9g22460 Beta vulgaris HOM05D004656 ORTHO05D005404 1.2e-22 112.1 88 64.8
SGA_v2.0_scaffold159G37668 Striga asiatica HOM05D004656 ORTHO05D005404 1.6e-22 111.7 151 49.7
Eucgr.C00045 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.5e-22 110.5 80 66.2
SMO119G0264 Selaginella moellendorffii HOM05D004656 ORTHO05D005404 7.8e-22 109.4 391 25.1
RcHm_v2.0_Chr5g0006431 Rosa chinensis HOM05D004656 ORTHO05D005404 3.3e-20 104.0 289 30.4
CSS0005991 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.6e-20 103.2 105 48.6
EL10Ac3g05965 Beta vulgaris HOM05D004656 ORTHO05D005404 1.8e-13 81.6 82 52.4
Cre12.g556650 Chlamydomonas reinhardtii HOM05D004656 ORTHO05D005404 3.9e-13 80.5 193 26.9
PRCOL_00000091 Prasinoderma coloniale HOM05D004656 ORTHO05D005404 8.7e-13 79.3 180 28.9
Eucgr.D02662 Eucalyptus grandis HOM05D004656 ORTHO05D005404 4.6e-06 57.0 81 43.2


User provided reference genes

Program Settings