Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3336 Utricularia gibba HOM05D003611 ORTHO05D004281 0.0e+00 1749.2 903 100.0
unitig_22.g6727 Utricularia gibba HOM05D003611 ORTHO05D004281 1.1e-221 774.2 758 60.8
MSTRG.4840 Avicennia marina HOM05D003611 ORTHO05D004281 6.6e-131 472.6 1033 37.3
MSTRG.20858 Avicennia marina HOM05D003611 ORTHO05D004281 4.2e-117 426.8 1048 35.6
Migut.B01791 Erythranthe guttata HOM05D003611 ORTHO05D004281 1.9e-109 401.4 1040 34.1
Dinv32512 Davidia involucrata HOM05D003611 ORTHO05D004281 1.6e-105 388.3 984 34.6
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 1.1e-104 385.6 1054 33.2
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 1.4e-99 368.6 1043 32.8
Solyc01g095020.3 Solanum lycopersicum HOM05D003611 ORTHO05D004281 4.8e-97 360.1 1032 32.4
Sopen01g038800 Solanum pennellii HOM05D003611 ORTHO05D004281 4.1e-96 357.1 1029 32.6
Nitab4.5_0010703g0040 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.5e-95 355.1 946 34.1
Peaxi162Scf00020g01228 Petunia axillaris HOM05D003611 ORTHO05D004281 7.7e-95 352.8 981 33.5
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 6.5e-94 349.7 1053 32.6
Prupe.2G176000 Prunus persica HOM05D003611 ORTHO05D004281 1.1e-93 349.0 1046 32.0
Potri.014G089200 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.9e-93 348.2 1035 33.3
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 4.2e-93 347.1 1022 33.2
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 1.2e-92 345.5 1064 32.1
Haze_15553 Corylus avellana HOM05D003611 ORTHO05D004281 1.4e-91 342.0 1047 32.0
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 1.4e-91 342.0 1041 31.7
Peaxi162Scf00585g00319 Petunia axillaris HOM05D003611 ORTHO05D004281 5.1e-91 340.1 975 32.2
Duzib138G0252 Durio zibethinus HOM05D003611 ORTHO05D004281 8.8e-91 339.3 1029 33.3
CSS0038908 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 2.2e-89 334.7 1037 32.6
Oeu018963.2 Olea europaea HOM05D003611 ORTHO05D004281 2.2e-89 334.7 1097 31.1
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 3.7e-89 334.0 1038 32.0
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 4.8e-89 333.6 1015 31.5
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 5.3e-88 330.1 1027 30.6
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 2.0e-87 328.2 987 34.2
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 7.7e-87 326.2 995 32.8
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 7.7e-87 326.2 996 33.1
Actinidia20152 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.3e-86 325.5 882 32.9
Sabra14G0064800 Salix brachista HOM05D003611 ORTHO05D004281 2.2e-86 324.7 1039 31.9
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 2.9e-86 324.3 1006 32.8
Actinidia10062 Actinidia chinensis HOM05D003611 ORTHO05D004281 6.5e-86 323.2 865 32.4
Solyc10g012030.4 Solanum lycopersicum HOM05D003611 ORTHO05D004281 8.5e-86 322.8 945 32.2
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 1.5e-85 322.0 976 34.0
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 1.5e-85 322.0 1038 32.7
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 9.4e-85 319.3 1052 32.1
Lj7A508G38 Lonicera japonica HOM05D003611 ORTHO05D004281 4.7e-84 317.0 1051 32.0
GSVIVG01026955001 Vitis vinifera HOM05D003611 ORTHO05D004281 4.7e-84 317.0 782 35.9
Lsat_1_v5_gn_4_35681 Lactuca sativa HOM05D003611 ORTHO05D004281 6.1e-84 316.6 727 35.9
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 6.1e-84 316.6 1046 32.0
Gohir.A11G091600 Gossypium hirsutum HOM05D003611 ORTHO05D004281 8.0e-84 316.2 997 32.6
Atru.chr5.552 Acer truncatum HOM05D003611 ORTHO05D004281 1.8e-83 315.1 1015 32.3
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 2.3e-83 314.7 760 35.7
Nitab4.5_0000690g0050 Nicotiana tabacum HOM05D003611 ORTHO05D004281 3.0e-83 314.3 887 32.4
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 1.1e-82 312.4 1070 30.9
Sopen10g005780 Solanum pennellii HOM05D003611 ORTHO05D004281 1.1e-82 312.4 969 31.2
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 4.4e-82 310.5 989 33.1
DCAR_008631 Daucus carota HOM05D003611 ORTHO05D004281 7.4e-82 309.7 928 32.8
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 9.7e-82 309.3 1020 32.0
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 1.7e-81 308.5 1002 32.4
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 2.2e-81 308.1 983 33.1
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 2.2e-81 308.1 1042 32.8
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 2.8e-81 307.8 1032 32.0
Actinidia18539 Actinidia chinensis HOM05D003611 ORTHO05D004281 8.2e-81 306.2 1051 31.3
Gohir.D11G096300 Gossypium hirsutum HOM05D003611 ORTHO05D004281 8.2e-81 306.2 987 32.6
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 1.1e-80 305.8 1050 30.1
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 4.1e-80 303.9 1001 32.0
DCAR_006945 Daucus carota HOM05D003611 ORTHO05D004281 5.3e-80 303.5 995 31.6
ECA234G2210 Erigeron canadensis HOM05D003611 ORTHO05D004281 7.0e-80 303.1 983 31.7
Sabra02G0147500 Salix brachista HOM05D003611 ORTHO05D004281 1.2e-79 302.4 1043 31.0
Gorai.007G102600 Gossypium raimondii HOM05D003611 ORTHO05D004281 1.6e-79 302.0 974 32.4
FAN10G4104 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.0e-79 301.6 1049 32.2
HanXRQChr17g0562341 Helianthus annuus HOM05D003611 ORTHO05D004281 2.0e-79 301.6 991 32.2
FAN03G1353 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.6e-79 301.2 1049 32.0
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 3.5e-79 300.8 1011 31.7
Nitab4.5_0000200g0170 Nicotiana tabacum HOM05D003611 ORTHO05D004281 3.5e-79 300.8 881 31.1
FAN01G0094 Fragaria x ananassa HOM05D003611 ORTHO05D004281 7.7e-79 299.7 1053 32.6
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.9e-78 297.7 1049 32.0
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 3.8e-78 297.4 1051 31.9
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.1e-77 295.8 1052 31.7
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 4.2e-77 293.9 934 31.5
TWI14G0836 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 5.5e-77 293.5 1046 32.4
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 1.2e-76 292.4 1052 31.4
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 1.6e-76 292.0 984 31.7
Oeu015220.3 Olea europaea HOM05D003611 ORTHO05D004281 1.6e-76 292.0 893 32.7
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 8.0e-76 289.7 987 31.2
TPR.G22300 Trifolium pratense HOM05D003611 ORTHO05D004281 1.8e-75 288.5 962 32.0
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 2.3e-75 288.1 1009 31.5
ClCG05G001310 Citrullus lanatus HOM05D003611 ORTHO05D004281 2.3e-75 288.1 1004 31.2
MBI11_g13553_MAGBIO Magnolia biondii HOM05D003611 ORTHO05D004281 1.2e-74 285.8 1033 31.5
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 1.5e-74 285.4 1005 31.4
Psat3g107120 Pisum sativum HOM05D003611 ORTHO05D004281 3.4e-74 284.3 987 31.2
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 4.4e-74 283.9 1015 31.8
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 5.7e-74 283.5 1050 31.1
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 5.7e-74 283.5 986 32.4
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 2.2e-73 281.6 994 31.8
Nitab4.5_0000915g0210 Nicotiana tabacum HOM05D003611 ORTHO05D004281 9.1e-72 276.2 623 36.1
Lalb_Chr17g0339111 Lupinus albus HOM05D003611 ORTHO05D004281 3.5e-71 274.2 974 30.1
EL10Ac1g00365 Beta vulgaris HOM05D003611 ORTHO05D004281 5.9e-71 273.5 1024 30.5
Lalb_Chr04g0259241 Lupinus albus HOM05D003611 ORTHO05D004281 7.7e-71 273.1 1009 31.4
Sc23g0002620 Simmondsia chinensis HOM05D003611 ORTHO05D004281 7.7e-71 273.1 975 31.2
vmacro13239 Vaccinium macrocarpon HOM05D003611 ORTHO05D004281 1.0e-70 272.7 1137 27.6
PSO478G2290 Papaver somniferum HOM05D003611 ORTHO05D004281 1.3e-70 272.3 1006 30.1
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 3.8e-70 270.8 1006 29.8
Sed0009698 Sechium edule HOM05D003611 ORTHO05D004281 6.5e-70 270.0 1004 29.6
PSO782G0890 Papaver somniferum HOM05D003611 ORTHO05D004281 3.2e-69 267.7 1017 29.9
TWI23G0144 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 4.2e-69 267.3 993 29.8
Hund27250 Selenicereus undatus HOM05D003611 ORTHO05D004281 2.1e-68 265.0 995 30.6
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 2.3e-67 261.5 976 31.6
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 2.3e-67 261.5 1008 30.8
AUR62004403 Chenopodium quinoa HOM05D003611 ORTHO05D004281 8.8e-67 259.6 996 30.8
AUR62022609 Chenopodium quinoa HOM05D003611 ORTHO05D004281 3.4e-66 257.7 991 30.6
Sc01g0003270 Simmondsia chinensis HOM05D003611 ORTHO05D004281 1.7e-65 255.4 886 32.1
THA.LOC104801395 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 1.7e-65 255.4 977 31.2
Lalb_Chr10g0096711 Lupinus albus HOM05D003611 ORTHO05D004281 2.8e-65 254.6 1005 29.0
CARHR249020 Cardamine hirsuta HOM05D003611 ORTHO05D004281 4.9e-65 253.8 793 32.8
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 6.3e-65 253.4 952 31.9
THA.LOC104825859 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 5.0e-62 243.8 1012 29.8
SalBow3G4181 Salvia bowleyana HOM05D003611 ORTHO05D004281 1.5e-61 242.3 539 37.8
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 1.6e-60 238.8 1026 29.2
AL6G52100 Arabidopsis lyrata HOM05D003611 ORTHO05D004281 2.1e-60 238.4 974 30.6
THA.LOC104817035 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 8.0e-60 236.5 883 30.0
Carub.0006s3636 Capsella rubella HOM05D003611 ORTHO05D004281 3.0e-59 234.6 779 33.0
Sp6g00840 Schrenkiella parvula HOM05D003611 ORTHO05D004281 5.2e-59 233.8 769 32.9
Lalb_Chr17g0339131 Lupinus albus HOM05D003611 ORTHO05D004281 1.2e-58 232.6 902 30.0
BcaB01g02283 Brassica carinata HOM05D003611 ORTHO05D004281 3.4e-58 231.1 850 31.3
Aa31LG5G730 Aethionema arabicum HOM05D003611 ORTHO05D004281 1.3e-57 229.2 1039 27.9
Thhalv10028394m.g Eutrema salsugineum HOM05D003611 ORTHO05D004281 3.7e-57 227.6 981 29.7
AT4G01290 Arabidopsis thaliana HOM05D003611 ORTHO05D004281 1.0e-54 219.5 970 29.5
BcaB05g23959 Brassica carinata HOM05D003611 ORTHO05D004281 1.0e-54 219.5 745 31.9
A03p31960 Brassica napus HOM05D003611 ORTHO05D004281 1.0e-54 219.5 986 29.4
SGA_v2.0_scaffold4G02289 Striga asiatica HOM05D003611 ORTHO05D004281 3.9e-54 217.6 548 36.1
BraA03t12368Z Brassica rapa HOM05D003611 ORTHO05D004281 8.6e-54 216.5 986 29.2
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 1.1e-53 216.1 928 29.7
Os06g0105900 Oryza sativa ssp. japonica HOM05D003611 ORTHO05D004281 2.5e-53 214.9 953 28.0
Zm00001eb374330 Zea mays HOM05D003611 ORTHO05D004281 1.2e-52 212.6 987 28.8
BcaB01g02151 Brassica carinata HOM05D003611 ORTHO05D004281 2.8e-52 211.5 726 32.0
BcaC01g06854 Brassica carinata HOM05D003611 ORTHO05D004281 3.6e-52 211.1 993 29.0
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 6.2e-52 210.3 722 32.0
C03p38980 Brassica napus HOM05D003611 ORTHO05D004281 8.0e-52 209.9 981 28.8
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 1.2e-50 206.1 718 31.2
BolC3t16170H Brassica oleracea HOM05D003611 ORTHO05D004281 1.5e-50 205.7 989 28.8
CDE11G0274 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 3.4e-50 204.5 715 32.2
BcaC04g24140 Brassica carinata HOM05D003611 ORTHO05D004281 4.4e-50 204.1 982 29.0
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 4.4e-50 204.1 982 29.0
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 4.4e-50 204.1 982 29.0
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 4.9e-49 200.7 748 29.5
CDE09G0589 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 6.4e-49 200.3 733 31.0
unitig_22.g6726 Utricularia gibba HOM05D003611 ORTHO05D004281 2.1e-44 185.3 181 63.0
ATR0661G469 Amborella trichopoda HOM05D003611 ORTHO05D004281 1.8e-43 182.2 750 30.0
SalBow3G3040 Salvia bowleyana HOM05D003611 ORTHO05D004281 2.6e-42 178.3 471 33.1
Ah.05g180220 Amaranthus hybridus HOM05D003611 ORTHO05D004281 2.9e-41 174.9 355 37.7
HPP92_002731 Vanilla planifolia HOM05D003611 ORTHO05D004281 3.5e-31 141.4 516 31.6
Lalb_Chr04g0259211 Lupinus albus HOM05D003611 ORTHO05D004281 2.5e-29 135.2 216 44.0
Cfa016292 Carpinus fangiana HOM05D003611 ORTHO05D004281 8.1e-28 130.2 478 29.3
Hma1.2p1_0623F.1_g191000 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 5.2e-27 127.5 201 43.8
QL09p012690 Quercus lobata HOM05D003611 ORTHO05D004281 1.2e-26 126.3 292 34.6
GSVIVG01028853001 Vitis vinifera HOM05D003611 ORTHO05D004281 7.8e-23 113.6 312 32.1
Thecc.03G184800 Theobroma cacao HOM05D003611 ORTHO05D011897 1.3e-22 112.8 213 41.8
TWI23G0357 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 7.3e-21 107.1 194 43.8
Gohir.A11G012500 Gossypium hirsutum HOM05D003611 ORTHO05D011897 8.1e-20 103.6 193 41.5
Duzib205G1157 Durio zibethinus HOM05D003611 ORTHO05D011897 1.4e-19 102.8 194 41.8
Lalb_Chr04g0259231 Lupinus albus HOM05D003611 ORTHO05D004281 1.8e-19 102.4 235 34.9
Gorai.007G013100 Gossypium raimondii HOM05D003611 ORTHO05D011897 1.5e-18 99.4 193 40.4
Gohir.D11G011700 Gossypium hirsutum HOM05D003611 ORTHO05D011897 2.6e-18 98.6 191 40.3
Atru.chr1.351 Acer truncatum HOM05D003611 ORTHO05D004281 7.6e-18 97.1 219 38.8
Dinv35257 Davidia involucrata HOM05D003611 ORTHO05D004281 5.4e-16 90.9 211 36.0
Haze_00050 Corylus avellana HOM05D003611 ORTHO05D004281 2.3e-14 85.5 207 35.3
Actinidia02823 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.9e-13 82.4 282 29.4
TAR374G1053 Trochodendron aralioides HOM05D003611 ORTHO05D004281 2.5e-13 82.0 473 27.5
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 3.3e-13 81.6 548 27.0
SEGI_14695 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 7.4e-13 80.5 224 33.5
Mapoly0012s0024 Marchantia polymorpha HOM05D003611 ORTHO05D021332 3.6e-12 78.2 713 25.5
Prupe.2G301400 Prunus persica HOM05D010729 ORTHO05D011897 8.1e-12 77.0 231 33.8
Hma1.2p1_2961F.1_g330880 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 4.0e-11 74.7 153 37.9
Ciclev10006595m.g Citrus clementina HOM05D003611 ORTHO05D004281 5.3e-11 74.3 200 32.0
Pp3c18_8750 Physcomitrium patens HOM05D025697 ORTHO05D004281 1.3e-09 69.7 795 25.0
ATR0661G048 Amborella trichopoda HOM05D003611 ORTHO05D004281 6.4e-09 67.4 212 34.4
MD01G1208800 Malus domestica HOM05D010729 ORTHO05D011897 8.4e-09 67.0 208 32.7
Oeu054339.1 Olea europaea HOM05D003611 ORTHO05D004281 3.2e-08 65.1 75 49.3
Pp3c19_15630 Physcomitrium patens HOM05D025697 ORTHO05D004281 3.5e-07 61.6 643 24.4
Hund11716 Selenicereus undatus HOM05D003611 ORTHO05D026482 1.0e-06 60.1 281 27.4


User provided reference genes

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