Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 4.3e-109 397.9 188 100.0
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 2.1e-79 299.3 189 74.1
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 2.3e-78 295.8 189 71.4
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 5.7e-77 291.2 191 70.2
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 7.5e-77 290.8 191 71.7
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 9.7e-77 290.4 189 71.4
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 2.4e-75 285.8 182 72.0
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 3.5e-74 282.0 181 70.7
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 4.5e-74 281.6 162 75.9
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 6.5e-73 277.7 174 71.8
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 1.5e-72 276.6 177 71.8
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.9e-72 276.2 170 74.1
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 4.2e-72 275.0 179 68.2
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 5.5e-72 274.6 189 68.3
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 1.6e-71 273.1 186 67.7
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 1.6e-71 273.1 177 70.1
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 2.7e-71 272.3 184 66.3
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 4.7e-71 271.6 177 69.5
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 4.7e-71 271.6 161 73.3
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 8.0e-71 270.8 185 67.6
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 8.0e-71 270.8 181 68.5
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 1.0e-70 270.4 165 72.1
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 1.0e-70 270.4 175 70.9
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 1.8e-70 269.6 186 67.2
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 2.3e-70 269.2 172 69.8
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 3.0e-70 268.9 186 66.7
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 4.0e-70 268.5 179 69.8
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 6.8e-70 267.7 162 71.0
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 6.8e-70 267.7 173 70.5
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 8.8e-70 267.3 184 64.1
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 8.8e-70 267.3 184 64.1
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 1.2e-69 266.9 190 65.3
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 1.2e-69 266.9 162 73.5
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 1.5e-69 266.5 174 69.5
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 1.5e-69 266.5 186 67.7
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 2.0e-69 266.2 170 71.8
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 2.0e-69 266.2 186 66.7
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 3.4e-69 265.4 193 64.8
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 4.4e-69 265.0 163 71.8
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 4.4e-69 265.0 162 74.1
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 5.7e-69 264.6 164 72.0
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 7.5e-69 264.2 175 71.4
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 9.8e-69 263.8 170 71.8
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 9.8e-69 263.8 162 69.8
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 1.3e-68 263.5 172 68.6
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 3.7e-68 261.9 180 63.3
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 3.7e-68 261.9 170 71.8
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 3.7e-68 261.9 170 70.6
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 3.7e-68 261.9 162 73.5
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 6.3e-68 261.2 199 62.8
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 8.3e-68 260.8 188 66.5
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 1.1e-67 260.4 189 65.1
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 1.4e-67 260.0 164 73.8
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 1.8e-67 259.6 186 64.0
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 2.4e-67 259.2 188 66.5
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 2.4e-67 259.2 199 62.3
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 3.1e-67 258.8 163 74.2
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 5.4e-67 258.1 177 66.7
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 1.2e-66 256.9 186 66.1
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 1.2e-66 256.9 177 66.7
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 2.7e-66 255.8 190 67.9
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 2.7e-66 255.8 164 73.8
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 4.5e-66 255.0 188 63.3
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 7.7e-66 254.2 157 72.0
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 1.3e-65 253.4 193 61.7
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.3e-65 253.4 181 64.6
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.3e-65 253.4 173 66.5
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 1.3e-65 253.4 177 67.2
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 2.9e-65 252.3 164 73.2
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 5.0e-65 251.5 164 73.2
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 5.0e-65 251.5 164 73.2
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 5.0e-65 251.5 164 72.6
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 5.0e-65 251.5 181 65.7
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 6.5e-65 251.1 187 64.2
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 8.6e-65 250.8 172 67.4
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 8.6e-65 250.8 163 69.3
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 1.1e-64 250.4 181 66.3
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 2.5e-64 249.2 171 67.3
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 2.5e-64 249.2 164 73.8
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 9.5e-64 247.3 190 63.2
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 2.1e-63 246.1 162 71.6
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 2.8e-63 245.7 165 72.1
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 2.8e-63 245.7 165 72.1
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 8.0e-63 244.2 164 69.5
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 8.0e-63 244.2 164 68.3
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 1.0e-62 243.8 183 65.0
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 1.0e-62 243.8 183 65.6
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 1.4e-62 243.4 188 61.7
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 1.8e-62 243.0 183 65.0
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 2.3e-62 242.7 162 71.6
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 4.0e-62 241.9 183 64.5
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 4.0e-62 241.9 158 70.3
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 5.2e-62 241.5 140 74.3
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 2.6e-61 239.2 160 66.2
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 5.7e-61 238.0 162 65.4
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 3.7e-60 235.3 174 62.6
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 1.1e-59 233.8 192 57.3
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 1.4e-59 233.4 147 70.1
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 3.1e-59 232.3 223 53.8
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 9.2e-59 230.7 174 63.2
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 1.6e-58 229.9 271 48.3
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 5.9e-58 228.0 180 60.6
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 7.8e-58 227.6 160 65.0
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 2.3e-57 226.1 143 72.0
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 1.9e-56 223.0 152 68.4
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 9.5e-56 220.7 126 77.8
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 1.6e-55 219.9 139 73.4
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 2.1e-55 219.5 144 72.9
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 2.0e-53 213.0 221 52.9
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 2.3e-49 199.5 148 58.8
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 2.3e-49 199.5 148 58.8
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 1.5e-48 196.8 146 63.0
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 2.5e-48 196.1 151 62.9
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 5.8e-45 184.9 128 64.8
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 1.7e-44 183.3 166 55.4
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 6.4e-44 181.4 135 65.9
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 8.3e-44 181.0 107 74.8
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 1.2e-42 177.2 140 60.0
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 1.9e-40 169.9 104 68.3
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 2.5e-40 169.5 104 69.2
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 7.3e-40 167.9 103 68.9
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 1.6e-39 166.8 97 76.3
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 4.0e-38 162.2 91 81.3
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 1.7e-36 156.8 129 58.9
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 2.2e-36 156.4 132 57.6
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 8.3e-36 154.5 105 63.8
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 7.8e-34 147.9 116 57.8
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 2.3e-33 146.4 101 70.3
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.4e-30 137.1 224 36.6
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 1.9e-27 126.7 91 63.7
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 2.7e-26 122.9 72 70.8
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 2.9e-20 102.8 96 53.1
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 4.2e-19 99.0 98 54.1
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 5.8e-13 78.6 186 33.3
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 1.3e-12 77.4 44 79.5
HPP92_017198 Vanilla planifolia HOM05D005701 ORTHO05D051565 2.2e-12 76.6 171 32.2


User provided reference genes

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