Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3318 Utricularia gibba HOM05D004053 ORTHO05D005065 3.2e-237 824.7 426 100.0
unitig_22.g6690 Utricularia gibba HOM05D004053 ORTHO05D005065 3.0e-81 306.6 263 64.6
SalBow6G4695 Salvia bowleyana HOM05D004053 ORTHO05D005065 9.6e-56 221.9 430 39.3
MSTRG.21579 Avicennia marina HOM05D004053 ORTHO05D005065 7.6e-53 212.2 431 37.6
Oeu011173.1 Olea europaea HOM05D004053 ORTHO05D005065 1.2e-50 204.9 425 38.8
Migut.D00258 Erythranthe guttata HOM05D004053 ORTHO05D005065 2.2e-47 194.1 426 37.1
SGA_v2.0_scaffold1G00444 Striga asiatica HOM05D004053 ORTHO05D005065 2.6e-45 187.2 414 37.2
Ciclev10020315m.g Citrus clementina HOM05D004053 ORTHO05D005065 6.3e-39 166.0 430 33.0
Manes.01G210500 Manihot esculenta HOM05D004053 ORTHO05D005065 6.3e-39 166.0 428 31.8
TAR362G1031 Trochodendron aralioides HOM05D004053 ORTHO05D005065 1.2e-37 161.8 444 33.1
Sopen09g028800 Solanum pennellii HOM05D004053 ORTHO05D005065 1.5e-37 161.4 400 34.8
Haze_04757 Corylus avellana HOM05D004053 ORTHO05D005065 4.5e-37 159.8 432 34.3
Solyc09g072990.3 Solanum lycopersicum HOM05D004053 ORTHO05D005065 1.3e-36 158.3 371 34.8
PGSC0003DMG400003799 Solanum tuberosum HOM05D004053 ORTHO05D005065 3.8e-36 156.8 378 35.4
Nitab4.5_0008204g0020 Nicotiana tabacum HOM05D004053 ORTHO05D005065 5.5e-35 152.9 371 35.3
vmacro02546 Vaccinium macrocarpon HOM05D004053 ORTHO05D005065 1.2e-34 151.8 413 31.5
Peaxi162Scf00777g00211 Petunia axillaris HOM05D004053 ORTHO05D005065 1.6e-34 151.4 419 33.2
GSVIVG01011074001 Vitis vinifera HOM05D004053 ORTHO05D005065 2.1e-34 151.0 434 32.7
Atru.chr5.1352 Acer truncatum HOM05D004053 ORTHO05D005065 1.0e-33 148.7 432 29.4
Lj5g0001920 Lotus japonicus HOM05D004053 ORTHO05D005065 2.3e-33 147.5 438 30.6
CSS0023044 Camellia sinensis var. sinensis HOM05D004053 ORTHO05D005065 3.0e-33 147.1 436 31.7
Nn4g26160 Nelumbo nucifera HOM05D004053 ORTHO05D005065 3.9e-33 146.7 442 32.4
CANSAT25G0924 Cannabis sativa HOM05D004053 ORTHO05D005065 6.7e-33 146.0 428 31.8
Cc01_g19820 Coffea canephora HOM05D004053 ORTHO05D005065 1.5e-32 144.8 429 32.2
Gohir.A12G006400 Gossypium hirsutum HOM05D004053 ORTHO05D005065 2.0e-32 144.4 434 30.6
Gorai.008G005800 Gossypium raimondii HOM05D004053 ORTHO05D005065 2.6e-32 144.1 432 30.3
Cfa006097 Carpinus fangiana HOM05D004053 ORTHO05D005065 5.7e-32 142.9 432 33.1
Gohir.D12G005800 Gossypium hirsutum HOM05D004053 ORTHO05D005065 9.7e-32 142.1 432 30.1
Actinidia24316 Actinidia chinensis HOM05D004053 ORTHO05D005065 1.3e-31 141.7 408 31.4
Nitab4.5_0001323g0010 Nicotiana tabacum HOM05D004053 ORTHO05D005065 2.8e-31 140.6 442 32.4
Lj1g0006875 Lotus japonicus HOM05D004053 ORTHO05D005065 1.1e-30 138.7 456 31.6
QL12p022856 Quercus lobata HOM05D004053 ORTHO05D005065 1.4e-30 138.3 437 30.7
Duzib138G0912 Durio zibethinus HOM05D004053 ORTHO05D005065 1.8e-30 137.9 430 29.1
Lj1C43T4 Lonicera japonica HOM05D004053 ORTHO05D005065 9.1e-30 135.6 409 31.1
FAN15G3549 Fragaria x ananassa HOM05D004053 ORTHO05D005065 2.0e-29 134.4 413 32.7
Lalb_Chr06g0163121 Lupinus albus HOM05D004053 ORTHO05D005065 2.0e-29 134.4 425 30.1
Phvul.001G148300 Phaseolus vulgaris HOM05D004053 ORTHO05D005065 2.6e-29 134.0 436 29.4
CiPaw.07G095100 Carya illinoinensis HOM05D004053 ORTHO05D005065 3.5e-29 133.7 428 29.2
Duzib133G0805 Durio zibethinus HOM05D004053 ORTHO05D005065 7.7e-29 132.5 429 29.8
Rhsim13G0022200 Rhododendron simsii HOM05D004053 ORTHO05D005065 1.3e-28 131.7 365 33.4
DCAR_005821 Daucus carota HOM05D004053 ORTHO05D005065 1.7e-28 131.3 418 31.8
FAN24G1933 Fragaria x ananassa HOM05D004053 ORTHO05D005065 1.7e-28 131.3 413 32.7
FvH4_2g24050 Fragaria vesca HOM05D004053 ORTHO05D005065 2.2e-28 131.0 413 32.7
FAN20G0349 Fragaria x ananassa HOM05D004053 ORTHO05D005065 2.2e-28 131.0 413 32.2
TWI14G1274 Tripterygium wilfordii HOM05D004053 ORTHO05D005065 2.2e-28 131.0 431 28.8
FAN27G0975 Fragaria x ananassa HOM05D004053 ORTHO05D005065 2.9e-28 130.6 413 32.7
PGR044G2575 Punica granatum HOM05D004053 ORTHO05D005065 8.5e-28 129.0 376 30.9
Glyma.19G153300 Glycine max HOM05D004053 ORTHO05D005065 1.1e-27 128.6 383 31.6
Gorai.007G133800 Gossypium raimondii HOM05D004053 ORTHO05D005065 3.2e-27 127.1 428 29.9
DCAR_012450 Daucus carota HOM05D004053 ORTHO05D005065 4.2e-27 126.7 427 29.5
Gohir.D11G124800 Gossypium hirsutum HOM05D004053 ORTHO05D005065 4.2e-27 126.7 428 29.9
arahy.Tifrunner.gnm1.ann1.V8R19R Arachis hypogaea HOM05D004053 ORTHO05D005065 2.7e-26 124.0 380 31.8
Oeu041712.1 Olea europaea HOM05D004053 ORTHO05D005065 2.7e-26 124.0 192 42.7
RcHm_v2.0_Chr6g0291821 Rosa chinensis HOM05D004053 ORTHO05D005065 2.7e-26 124.0 413 31.0
Sc05g0005080 Simmondsia chinensis HOM05D004053 ORTHO05D005065 2.7e-26 124.0 363 32.8
Hma1.2p1_0257F.1_g103830 Hydrangea macrophylla HOM05D004053 ORTHO05D005065 3.6e-26 123.6 391 31.2
Prupe.8G245900 Prunus persica HOM05D004053 ORTHO05D005065 3.6e-26 123.6 433 30.3
Glyma.10G024200 Glycine max HOM05D004053 ORTHO05D005065 4.7e-26 123.2 381 30.2
Lalb_Chr21g0306591 Lupinus albus HOM05D004053 ORTHO05D005065 4.7e-26 123.2 380 31.3
Phvul.007G169200 Phaseolus vulgaris HOM05D004053 ORTHO05D005065 4.7e-26 123.2 370 31.4
Aqoxy5G00541 Aquilegia oxysepala HOM05D004053 ORTHO05D005065 6.1e-26 122.9 376 30.9
Glyma.02G149700 Glycine max HOM05D004053 ORTHO05D005065 6.1e-26 122.9 382 31.4
Glyma.03G150700 Glycine max HOM05D004053 ORTHO05D005065 1.4e-25 121.7 439 30.5
Potri.014G138200 Populus trichocarpa HOM05D004053 ORTHO05D005065 1.8e-25 121.3 408 29.9
VMungo0720G1290 Vigna mungo HOM05D004053 ORTHO05D005065 1.8e-25 121.3 371 31.0
Ca_10403_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 3.0e-25 120.6 390 28.5
Thecc.01G284500 Theobroma cacao HOM05D004053 ORTHO05D005065 3.9e-25 120.2 431 29.0
PSO832G4321 Papaver somniferum HOM05D004053 ORTHO05D005065 5.2e-25 119.8 377 30.8
Gohir.A11G120100 Gossypium hirsutum HOM05D004053 ORTHO05D005065 6.7e-25 119.4 428 30.1
Psat3g065760 Pisum sativum HOM05D004053 ORTHO05D005065 6.7e-25 119.4 387 30.0
arahy.Tifrunner.gnm1.ann1.K8THJN Arachis hypogaea HOM05D004053 ORTHO05D005065 8.8e-25 119.0 386 30.8
Eucgr.K03405 Eucalyptus grandis HOM05D004053 ORTHO05D005065 1.5e-24 118.2 246 34.1
Cpa.g.sc9.119 Carica papaya HOM05D004053 ORTHO05D005065 4.4e-24 116.7 442 29.6
Psat6g168840 Pisum sativum HOM05D004053 ORTHO05D005065 4.4e-24 116.7 390 27.9
Actinidia00729 Actinidia chinensis HOM05D004053 ORTHO05D005065 5.7e-24 116.3 272 35.7
Medtr1g089980 Medicago truncatula HOM05D004053 ORTHO05D005065 5.7e-24 116.3 425 27.8
CsaV3_6G036930 Cucumis sativus L. HOM05D004053 ORTHO05D005065 9.7e-24 115.5 366 30.6
Potri.002G215800 Populus trichocarpa HOM05D004053 ORTHO05D005065 9.7e-24 115.5 430 28.4
MD11G1290800 Malus domestica HOM05D004053 ORTHO05D005065 2.2e-23 114.4 428 28.7
MD03G1269800 Malus domestica HOM05D004053 ORTHO05D005065 2.8e-23 114.0 357 32.5
PSO675G9209 Papaver somniferum HOM05D004053 ORTHO05D005065 4.8e-23 113.2 407 30.0
Lj2A1179G44 Lonicera japonica HOM05D004053 ORTHO05D005065 6.3e-23 112.8 347 30.0
CiPaw.08G102900 Carya illinoinensis HOM05D004053 ORTHO05D005065 8.2e-23 112.5 363 29.5
MELO3C014420.2 Cucumis melo HOM05D004053 ORTHO05D005065 8.2e-23 112.5 389 27.5
THA.LOC104801216 Tarenaya hassleriana HOM05D004053 ORTHO05D005065 8.2e-23 112.5 384 29.2
Aqoxy2G03230 Aquilegia oxysepala HOM05D004053 ORTHO05D005065 1.8e-22 111.3 371 31.5
HanXRQChr01g0002441 Helianthus annuus HOM05D004053 ORTHO05D005065 3.1e-22 110.5 248 34.3
CDE11G0853 Ceratophyllum demersum HOM05D004053 ORTHO05D005065 5.3e-22 109.8 238 35.3
CDE05G2296 Ceratophyllum demersum HOM05D004053 ORTHO05D005065 9.1e-22 109.0 236 34.7
THA.LOC104815946 Tarenaya hassleriana HOM05D004053 ORTHO05D005065 9.1e-22 109.0 373 29.5
PSO541G4889 Papaver somniferum HOM05D004053 ORTHO05D005065 1.2e-21 108.6 276 32.6
EL10Ac7g17207 Beta vulgaris HOM05D004053 ORTHO05D005065 1.6e-21 108.2 363 29.8
Ca_08561_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 1.6e-21 108.2 444 27.7
Ca_08595_v3 Cicer arietinum L. HOM05D004053 ORTHO05D005065 1.6e-21 108.2 444 27.7
Medtr7g094470 Medicago truncatula HOM05D004053 ORTHO05D005065 2.0e-21 107.8 437 29.7
Os05g0143300 Oryza sativa ssp. japonica HOM05D004053 ORTHO05D005065 2.6e-21 107.5 363 29.8
arahy.Tifrunner.gnm1.ann1.U9BU7H Arachis hypogaea HOM05D004053 ORTHO05D005065 3.5e-21 107.1 243 35.4
VMungo1383G0556 Vigna mungo HOM05D004053 ORTHO05D005065 4.5e-21 106.7 365 29.0
Dinv11260 Davidia involucrata HOM05D004053 ORTHO05D005065 5.9e-21 106.3 360 30.0
Zm00001eb417790 Zea mays HOM05D004053 ORTHO05D005065 5.9e-21 106.3 367 30.0
Duzib211G0472 Durio zibethinus HOM05D004053 ORTHO05D005065 7.7e-21 105.9 362 29.6
ECA248G2902 Erigeron canadensis HOM05D004053 ORTHO05D005065 1.0e-20 105.5 422 27.7
Nn1g02136 Nelumbo nucifera HOM05D004053 ORTHO05D005065 1.0e-20 105.5 344 32.3
HanXRQChr02g0046661 Helianthus annuus HOM05D004053 ORTHO05D005065 2.2e-20 104.4 409 28.4
TPR.G32826 Trifolium pratense HOM05D004053 ORTHO05D005065 2.2e-20 104.4 439 28.2
Sed0017907 Sechium edule HOM05D004053 ORTHO05D005065 5.5e-19 99.8 173 37.6
Sabra14G0104300 Salix brachista HOM05D004053 ORTHO05D005065 1.6e-18 98.2 469 27.9
ClCG07G000110 Citrullus lanatus HOM05D004053 ORTHO05D005065 2.7e-18 97.4 367 28.3
AUR62036816 Chenopodium quinoa HOM05D004053 ORTHO05D005065 2.3e-17 94.4 218 33.9
AUR62033710 Chenopodium quinoa HOM05D004053 ORTHO05D005065 5.2e-17 93.2 218 33.5
Lsat_1_v5_gn_5_187500 Lactuca sativa HOM05D004053 ORTHO05D005065 6.8e-17 92.8 141 41.8
Thhalv10028686m.g Eutrema salsugineum HOM05D004053 ORTHO05D005065 8.8e-17 92.4 419 25.1
AT4G02920 Arabidopsis thaliana HOM05D004053 ORTHO05D005065 3.4e-16 90.5 419 25.3
Carub.0006s3417 Capsella rubella HOM05D004053 ORTHO05D005065 7.5e-16 89.4 358 26.5
BraA03t12252Z Brassica rapa HOM05D004053 ORTHO05D005065 9.8e-16 89.0 368 28.0
C03p37430 Brassica napus HOM05D004053 ORTHO05D005065 1.3e-15 88.6 368 27.7
Sp6g02950 Schrenkiella parvula HOM05D004053 ORTHO05D005065 1.7e-15 88.2 418 24.6
A03p30730 Brassica napus HOM05D004053 ORTHO05D005065 2.2e-15 87.8 368 27.7
BolC3t16035H Brassica oleracea HOM05D004053 ORTHO05D005065 3.7e-15 87.0 368 27.4
Aa31LG5G2500 Aethionema arabicum HOM05D004053 ORTHO05D005065 8.3e-15 85.9 416 25.2
CARHR251290 Cardamine hirsuta HOM05D004053 ORTHO05D005065 1.2e-13 82.0 418 23.7
AL6G50010 Arabidopsis lyrata HOM05D004053 ORTHO05D005065 7.7e-13 79.3 418 25.4
TPR.G13395 Trifolium pratense HOM05D004053 ORTHO05D005065 2.9e-12 77.4 307 27.0
BcaB01g02487 Brassica carinata HOM05D004053 ORTHO05D005065 4.2e-11 73.6 225 28.9
Sp1g02330 Schrenkiella parvula HOM05D004053 ORTHO05D005065 7.2e-11 72.8 239 27.6
BcaC01g06723 Brassica carinata HOM05D004053 ORTHO05D005065 9.4e-11 72.4 153 30.7
BcaC03g16190 Brassica carinata HOM05D004053 ORTHO05D005065 1.2e-10 72.0 140 33.6
ATR0665G655 Amborella trichopoda HOM05D004053 ORTHO05D005065 1.6e-10 71.6 390 27.9
A02p25050 Brassica napus HOM05D004053 ORTHO05D005065 1.6e-10 71.6 143 32.2
C02p39720 Brassica napus HOM05D004053 ORTHO05D005065 1.6e-10 71.6 143 32.2
BolC2t09985H Brassica oleracea HOM05D004053 ORTHO05D005065 1.6e-10 71.6 143 32.2
BraA02t07493Z Brassica rapa HOM05D004053 ORTHO05D005065 1.6e-10 71.6 143 32.2
Thhalv10007898m.g Eutrema salsugineum HOM05D004053 ORTHO05D005065 2.1e-10 71.2 154 30.5
Carub.0001s0245 Capsella rubella HOM05D004053 ORTHO05D005065 8.0e-10 69.3 371 26.1
AT1G03340 Arabidopsis thaliana HOM05D004053 ORTHO05D005065 8.8e-09 65.9 373 24.7
RcHm_v2.0_Chr6g0291831 Rosa chinensis HOM05D004053 ORTHO05D005065 2.0e-08 64.7 83 44.6
MBI17_g34956_MAGBIO Magnolia biondii HOM05D004053 ORTHO05D005065 3.7e-07 60.5 300 26.7
BraA10t42462Z Brassica rapa HOM05D004053 ORTHO05D005065 1.8e-06 58.2 241 26.6
A10p01890 Brassica napus HOM05D004053 ORTHO05D005065 2.4e-06 57.8 268 26.9
AL1G12850 Arabidopsis lyrata HOM05D004053 ORTHO05D005065 5.4e-06 56.6 363 23.7


User provided reference genes

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