Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3292 Utricularia gibba HOM05D002307 ORTHO05D002378 3.9e-61 238.4 168 100.0
unitig_8.g3665 Utricularia gibba HOM05D002307 ORTHO05D002378 3.2e-10 69.3 95 53.7
Lalb_Chr14g0374431 Lupinus albus HOM05D002307 ORTHO05D002378 1.2e-09 67.4 114 40.4
Actinidia07182 Actinidia chinensis HOM05D002307 ORTHO05D002378 6.6e-08 61.6 200 44.5
Glyma.12G080800 Glycine max HOM05D002307 ORTHO05D002378 6.6e-08 61.6 118 38.1
CiPaw.13G123300 Carya illinoinensis HOM05D002307 ORTHO05D002378 1.1e-07 60.8 129 37.2
AL4G22010 Arabidopsis lyrata HOM05D002307 ORTHO05D002378 1.9e-07 60.1 177 35.0
Glyma.13G322300 Glycine max HOM05D002307 ORTHO05D002378 2.5e-07 59.7 116 37.9
Peaxi162Scf01492g00002 Petunia axillaris HOM05D002307 ORTHO05D002378 2.5e-07 59.7 213 42.7
Dinv16216 Davidia involucrata HOM05D002307 ORTHO05D002378 3.3e-07 59.3 121 36.4
unitig_22.g5650 Utricularia gibba HOM05D002307 ORTHO05D002378 3.3e-07 59.3 97 46.4
Potri.009G006000 Populus trichocarpa HOM05D002307 ORTHO05D002378 4.3e-07 58.9 129 38.0
Hund01432 Selenicereus undatus HOM05D002307 ORTHO05D002378 5.6e-07 58.5 124 37.1
THA.LOC104800578 Tarenaya hassleriana HOM05D002307 ORTHO05D002378 5.6e-07 58.5 130 39.2
Lj2P1009T17 Lonicera japonica HOM05D002307 ORTHO05D002378 7.3e-07 58.2 108 38.9
Sabra04G0146700 Salix brachista HOM05D002307 ORTHO05D002378 7.3e-07 58.2 207 44.4
Lalb_Chr24g0394911 Lupinus albus HOM05D002307 ORTHO05D002378 9.5e-07 57.8 110 37.3
Manes.04G013500 Manihot esculenta HOM05D002307 ORTHO05D002378 9.5e-07 57.8 206 35.4
Medtr2g084270 Medicago truncatula HOM05D002307 ORTHO05D002378 9.5e-07 57.8 111 39.6
RcHm_v2.0_Chr5g0056941 Rosa chinensis HOM05D002307 ORTHO05D002378 9.5e-07 57.8 124 37.9
TPR.G21039 Trifolium pratense HOM05D002307 ORTHO05D002378 9.5e-07 57.8 112 40.2
Carub.0004s0894 Capsella rubella HOM05D002307 ORTHO05D002378 1.2e-06 57.4 183 33.3
Duzib170G0428 Durio zibethinus HOM05D002307 ORTHO05D002378 1.6e-06 57.0 139 36.0
Eucgr.J00385 Eucalyptus grandis HOM05D002307 ORTHO05D002378 1.6e-06 57.0 127 37.8
Lj3g0013406 Lotus japonicus HOM05D002307 ORTHO05D002378 1.6e-06 57.0 123 35.8
QL01p015252 Quercus lobata HOM05D002307 ORTHO05D002378 1.6e-06 57.0 129 34.1
Sabra09G0003300 Salix brachista HOM05D002307 ORTHO05D002378 1.6e-06 57.0 129 37.2
Dinv29374 Davidia involucrata HOM05D002307 ORTHO05D002378 2.1e-06 56.6 120 37.5
Duzib150G0400 Durio zibethinus HOM05D002307 ORTHO05D002378 2.1e-06 56.6 127 38.6
Oeu040436.1 Olea europaea HOM05D002307 ORTHO05D002378 2.1e-06 56.6 100 41.0
TPR.G36830 Trifolium pratense HOM05D002307 ORTHO05D002378 2.1e-06 56.6 118 33.1
Gorai.004G231800 Gossypium raimondii HOM05D002307 ORTHO05D002378 2.8e-06 56.2 126 37.3
Gohir.D08G218000 Gossypium hirsutum HOM05D002307 ORTHO05D002378 3.6e-06 55.8 127 37.0
Actinidia24143 Actinidia chinensis HOM05D002307 ORTHO05D002378 4.7e-06 55.5 196 43.4
Aa31LG5G8000 Aethionema arabicum HOM05D002307 ORTHO05D002378 4.7e-06 55.5 102 43.1
Ca_01709_v3 Cicer arietinum L. HOM05D002307 ORTHO05D002378 4.7e-06 55.5 117 35.0
Gohir.A08G200800 Gossypium hirsutum HOM05D002307 ORTHO05D002378 4.7e-06 55.5 128 36.7
Cpa.g.sc1.11 Carica papaya HOM05D002307 ORTHO05D002378 6.2e-06 55.1 197 44.2
Lj3g0008731 Lotus japonicus HOM05D002307 ORTHO05D002378 6.2e-06 55.1 128 36.7
Haze_23709 Corylus avellana HOM05D002307 ORTHO05D002378 8.0e-06 54.7 127 34.6
Oeu007740.1 Olea europaea HOM05D002307 ORTHO05D002378 8.0e-06 54.7 111 38.7
Potri.004G216100 Populus trichocarpa HOM05D002307 ORTHO05D002378 8.0e-06 54.7 128 36.7


User provided reference genes

Program Settings