Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3183 Utricularia gibba HOM05D003787 ORTHO05D001736 8.4e-214 746.9 415 100.0
Migut.L01187 Erythranthe guttata HOM05D003787 ORTHO05D001736 1.5e-16 91.7 228 36.0
MSTRG.755 Avicennia marina HOM05D011975 ORTHO05D001736 4.4e-13 80.1 205 34.1
Potri.010G158000 Populus trichocarpa HOM05D003787 ORTHO05D001736 4.9e-12 76.6 173 31.8
Sabra08G0072600 Salix brachista HOM05D003787 ORTHO05D001736 4.9e-12 76.6 94 44.7
Sabra10G0120000 Salix brachista HOM05D003787 ORTHO05D001736 6.4e-12 76.3 175 30.3
Potri.008G096300 Populus trichocarpa HOM05D003787 ORTHO05D001736 1.1e-11 75.5 94 45.7
SHI15724 Sapria himalayana HOM05D003787 ORTHO05D001736 3.2e-11 73.9 95 45.3
Hma1.2p1_0566F.1_g179820 Hydrangea macrophylla HOM05D003787 ORTHO05D001736 5.4e-11 73.2 279 29.0
Oeu004587.1 Olea europaea HOM05D011975 ORTHO05D001736 5.4e-11 73.2 159 35.2
Lalb_Chr17g0341211 Lupinus albus HOM05D014318 ORTHO05D001736 9.2e-11 72.4 216 28.7
THA.LOC104800368 Tarenaya hassleriana HOM05D011628 ORTHO05D014769 9.2e-11 72.4 91 48.4
DCAR_024124 Daucus carota HOM05D003787 ORTHO05D001736 1.2e-10 72.0 164 33.5
PGR119G1736 Punica granatum HOM05D003787 ORTHO05D001736 1.6e-10 71.6 189 33.9
Lalb_Chr10g0098891 Lupinus albus HOM05D014318 ORTHO05D001736 2.0e-10 71.2 101 42.6
THA.LOC104822009 Tarenaya hassleriana HOM05D011628 ORTHO05D014769 2.7e-10 70.9 88 50.0
GSVIVG01012223001 Vitis vinifera HOM05D003787 ORTHO05D001736 3.5e-10 70.5 101 43.6
Lalb_Chr04g0255641 Lupinus albus HOM05D014318 ORTHO05D001736 4.6e-10 70.1 203 31.0
SGA_v2.0_scaffold36G14463 Striga asiatica HOM05D003787 ORTHO05D001736 1.0e-09 68.9 194 35.1
VMungo1215G1514 Vigna mungo HOM05D014318 ORTHO05D001736 1.0e-09 68.9 141 36.9
CsaV3_5G033340 Cucumis sativus L. HOM05D003787 ORTHO05D001736 1.3e-09 68.6 107 42.1
Glyma.19G030300 Glycine max HOM05D003787 ORTHO05D001736 1.3e-09 68.6 75 50.7
vmacro10428 Vaccinium macrocarpon HOM05D003787 ORTHO05D001736 1.3e-09 68.6 101 45.5
ClCG05G023700 Citrullus lanatus HOM05D003787 ORTHO05D001736 1.7e-09 68.2 100 43.0
Rhsim09G0127000 Rhododendron simsii HOM05D003787 ORTHO05D001736 1.7e-09 68.2 173 33.5
Gorai.009G326900 Gossypium raimondii HOM05D003787 ORTHO05D001736 2.3e-09 67.8 199 32.2
Actinidia13966 Actinidia chinensis HOM05D003787 ORTHO05D001736 3.0e-09 67.4 121 39.7
MELO3C012154.2 Cucumis melo HOM05D003787 ORTHO05D001736 3.9e-09 67.0 105 41.0
Gohir.D05G306900 Gossypium hirsutum HOM05D003787 ORTHO05D001736 3.9e-09 67.0 227 30.8
CAN.G1377.3 Capsicum annuum HOM05D011975 ORTHO05D001736 5.0e-09 66.6 108 45.4
Dinv33830 Davidia involucrata HOM05D003787 ORTHO05D001736 6.6e-09 66.2 105 41.9
Phvul.004G037400 Phaseolus vulgaris HOM05D003787 ORTHO05D001736 6.6e-09 66.2 57 61.4
Haze_14428 Corylus avellana HOM05D003787 ORTHO05D001736 8.6e-09 65.9 106 41.5
Dinv16736 Davidia involucrata HOM05D003787 ORTHO05D001736 8.6e-09 65.9 83 47.0
Medtr5g045480 Medicago truncatula HOM05D003787 ORTHO05D001736 8.6e-09 65.9 92 46.7
Potri.017G094300 Populus trichocarpa HOM05D003787 ORTHO05D001736 8.6e-09 65.9 94 44.7
CSS0023913 Camellia sinensis var. sinensis HOM05D003787 ORTHO05D001736 1.1e-08 65.5 80 51.2
Ciclev10033684m.g Citrus clementina HOM05D003787 ORTHO05D001736 1.1e-08 65.5 125 36.0
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 1.1e-08 65.5 63 55.6
Glyma.13G056300 Glycine max HOM05D003787 ORTHO05D001736 1.1e-08 65.5 75 48.0
QL03p074082 Quercus lobata HOM05D003787 ORTHO05D001736 1.1e-08 65.5 105 37.1
TPR.G24475 Trifolium pratense HOM05D003787 ORTHO05D000653 1.1e-08 65.5 130 37.7
Lju41C3T13 Lonicera japonica HOM05D003787 ORTHO05D001736 1.5e-08 65.1 73 49.3
Oeu007068.1 Olea europaea HOM05D003787 ORTHO05D001736 1.5e-08 65.1 124 35.5
TAR374G1256 Trochodendron aralioides HOM05D003787 ORTHO05D001736 1.5e-08 65.1 84 42.9
Psat2g130920 Pisum sativum HOM05D014318 ORTHO05D001736 1.9e-08 64.7 97 44.3
Sabra17G0083100 Salix brachista HOM05D003787 ORTHO05D001736 1.9e-08 64.7 124 37.9
SalBow1G3309 Salvia bowleyana HOM05D003787 ORTHO05D001736 2.5e-08 64.3 130 33.8
SalBow1G5677 Salvia bowleyana HOM05D003787 ORTHO05D001736 2.5e-08 64.3 130 33.8
PGSC0003DMG400001359 Solanum tuberosum HOM05D003787 ORTHO05D001736 2.5e-08 64.3 157 34.4
VMungo0464G0106 Vigna mungo HOM05D003787 ORTHO05D001736 2.5e-08 64.3 144 36.1
Ca_04304_v3 Cicer arietinum L. HOM05D003787 ORTHO05D001736 3.3e-08 63.9 96 39.6
Dinv34065 Davidia involucrata HOM05D003787 ORTHO05D001736 3.3e-08 63.9 234 29.1
TWI31G1463 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 3.3e-08 63.9 104 44.2
Aqoxy3G03685 Aquilegia oxysepala HOM05D006637 ORTHO05D001736 4.3e-08 63.5 141 36.2
Glyma.01G060001 Glycine max HOM05D014318 ORTHO05D001736 5.6e-08 63.2 150 35.3
Peaxi162Scf00166g00047 Petunia axillaris HOM05D003787 ORTHO05D001736 5.6e-08 63.2 180 34.4
TAR371G0370 Trochodendron aralioides HOM05D006637 ORTHO05D001736 5.6e-08 63.2 83 47.0
TAR622G0628 Trochodendron aralioides HOM05D003787 ORTHO05D001736 5.6e-08 63.2 85 41.2
CSS0001662 Camellia sinensis var. sinensis HOM05D003787 ORTHO05D001736 7.3e-08 62.8 69 53.6
Cfa007670 Carpinus fangiana HOM05D003787 ORTHO05D001736 7.3e-08 62.8 106 38.7
Peaxi162Scf00026g00163 Petunia axillaris HOM05D011975 ORTHO05D001736 7.3e-08 62.8 117 41.0
Prupe.1G287500 Prunus persica HOM05D003787 ORTHO05D001736 7.3e-08 62.8 74 47.3
COL.COLO4_27878 Corchorus olitorius HOM05D003787 ORTHO05D001736 9.5e-08 62.4 89 43.8
Lj2g0027532 Lotus japonicus HOM05D014318 ORTHO05D001736 9.5e-08 62.4 72 51.4
Thecc.02G330000 Theobroma cacao HOM05D003787 ORTHO05D001736 9.5e-08 62.4 178 32.0
Nn4g23435 Nelumbo nucifera HOM05D006637 ORTHO05D001736 1.2e-07 62.0 178 33.1
Nitab4.5_0001118g0030 Nicotiana tabacum HOM05D011975 ORTHO05D001736 1.2e-07 62.0 129 38.8
Duzib251G0768 Durio zibethinus HOM05D003787 ORTHO05D001736 1.6e-07 61.6 167 32.9
Duzib268G1106 Durio zibethinus HOM05D003787 ORTHO05D001736 1.6e-07 61.6 178 33.7
CiPaw.05G124800 Carya illinoinensis HOM05D003787 ORTHO05D001736 2.1e-07 61.2 101 41.6
MD17G1059900 Malus domestica HOM05D003787 ORTHO05D001736 2.1e-07 61.2 99 39.4
Rhsim08G0075000 Rhododendron simsii HOM05D003787 ORTHO05D001736 2.1e-07 61.2 147 38.1
Phvul.003G042100 Phaseolus vulgaris HOM05D014318 ORTHO05D001736 2.8e-07 60.8 140 32.1
Actinidia17586 Actinidia chinensis HOM05D003787 ORTHO05D001736 3.6e-07 60.5 138 38.4
Migut.K01274 Erythranthe guttata HOM05D003787 ORTHO05D001736 3.6e-07 60.5 92 41.3
Gorai.008G176900 Gossypium raimondii HOM05D039012 ORTHO05D001736 3.6e-07 60.5 133 36.1
Nitab4.5_0003841g0060 Nicotiana tabacum HOM05D003787 ORTHO05D001736 3.6e-07 60.5 284 27.1
unitig_32.g11770 Utricularia gibba HOM05D003787 ORTHO05D001736 3.6e-07 60.5 89 43.8
Migut.H00622 Erythranthe guttata HOM05D003787 ORTHO05D001736 6.2e-07 59.7 57 56.1
Sed0025283 Sechium edule HOM05D003787 ORTHO05D001736 6.2e-07 59.7 69 52.2
CAN.G497.103 Capsicum annuum HOM05D003787 ORTHO05D001736 8.1e-07 59.3 255 28.2
Cpa.g.sc1.128 Carica papaya HOM05D003787 ORTHO05D001736 8.1e-07 59.3 159 34.6
Nitab4.5_0007460g0020 Nicotiana tabacum HOM05D011975 ORTHO05D001736 8.1e-07 59.3 301 27.9
Thecc.04G095900 Theobroma cacao HOM05D003787 ORTHO05D001736 8.1e-07 59.3 123 37.4
Psat1g068800 Pisum sativum HOM05D003787 ORTHO05D001736 1.1e-06 58.9 103 40.8
PGSC0003DMG400021892 Solanum tuberosum HOM05D011975 ORTHO05D001736 1.1e-06 58.9 205 27.8
DCAR_030042 Daucus carota HOM05D003787 ORTHO05D001736 1.4e-06 58.5 107 36.4
FAN22G0001 Fragaria x ananassa HOM05D003787 ORTHO05D001736 1.4e-06 58.5 117 33.3
vmacro18147 Vaccinium macrocarpon HOM05D003787 ORTHO05D001736 1.4e-06 58.5 117 39.3
MD16G1060800 Malus domestica HOM05D003787 ORTHO05D001736 1.8e-06 58.2 79 39.2
Nitab4.5_0026364g0010 Nicotiana tabacum HOM05D011975 ORTHO05D001736 1.8e-06 58.2 168 33.9
Atru.chr9.567 Acer truncatum HOM05D006637 ORTHO05D001736 2.3e-06 57.8 225 28.0
Aqoxy3G00509 Aquilegia oxysepala HOM05D006637 ORTHO05D001736 2.3e-06 57.8 105 37.1
Gohir.A12G161000 Gossypium hirsutum HOM05D039012 ORTHO05D001736 2.3e-06 57.8 110 36.4
CANSAT64G2286 Cannabis sativa HOM05D003787 ORTHO05D001736 3.1e-06 57.4 83 41.0
Carub.0005s0277 Capsella rubella HOM05D003787 ORTHO05D001736 3.1e-06 57.4 70 52.9
Gohir.D12G164300 Gossypium hirsutum HOM05D039012 ORTHO05D001736 3.1e-06 57.4 133 35.3
Lalb_Chr02g0158901 Lupinus albus HOM05D003787 ORTHO05D001736 3.1e-06 57.4 57 52.6
MD06G1225400 Malus domestica HOM05D006637 ORTHO05D001736 3.1e-06 57.4 133 36.8
MD09G1067000 Malus domestica HOM05D003787 ORTHO05D001736 3.1e-06 57.4 67 44.8
Atru.chr11.1622 Acer truncatum HOM05D003787 ORTHO05D001736 4.0e-06 57.0 173 29.5
Lalb_Chr06g0174951 Lupinus albus HOM05D003787 ORTHO05D001736 4.0e-06 57.0 57 52.6
MD13G1062500 Malus domestica HOM05D003787 ORTHO05D001736 4.0e-06 57.0 192 32.3
Nitab4.5_0002960g0050 Nicotiana tabacum HOM05D003787 ORTHO05D001736 4.0e-06 57.0 215 28.8
Nitab4.5_0007320g0010 Nicotiana tabacum HOM05D003787 ORTHO05D001736 4.0e-06 57.0 338 24.9
TWI79G0236 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 4.0e-06 57.0 154 35.7
Haze_11903 Corylus avellana HOM05D003787 ORTHO05D001736 5.2e-06 56.6 119 32.8
Rhsim10G0049700 Rhododendron simsii HOM05D003787 ORTHO05D001736 5.2e-06 56.6 75 42.7
arahy.Tifrunner.gnm1.ann1.NP9FW8 Arachis hypogaea HOM05D003787 ORTHO05D001736 6.8e-06 56.2 72 44.4
Nitab4.5_0001637g0040 Nicotiana tabacum HOM05D003787 ORTHO05D001736 6.8e-06 56.2 233 28.8
Sopen01g005900 Solanum pennellii HOM05D011975 ORTHO05D001736 6.8e-06 56.2 203 28.6
Gohir.A05G306700 Gossypium hirsutum HOM05D003787 ORTHO05D001736 8.9e-06 55.8 166 30.7
Manes.02G055200 Manihot esculenta HOM05D003787 ORTHO05D001736 8.9e-06 55.8 124 32.3
Sp2g14470 Schrenkiella parvula HOM05D003787 ORTHO05D001736 8.9e-06 55.8 88 45.5
Sc11g0002500 Simmondsia chinensis HOM05D003787 ORTHO05D001736 8.9e-06 55.8 151 33.8
SGA_v2.0_scaffold154G37113 Striga asiatica HOM05D003787 ORTHO05D001736 8.9e-06 55.8 87 43.7


User provided reference genes

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