Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 7.0e-110 400.6 198 100.0
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 1.2e-80 303.5 198 73.2
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 3.2e-78 295.4 198 70.2
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 3.2e-78 295.4 198 70.2
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 2.7e-77 292.4 197 68.5
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 6.0e-77 291.2 198 66.7
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 7.9e-77 290.8 198 69.7
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 1.0e-76 290.4 197 67.5
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 1.0e-76 290.4 198 68.7
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 1.3e-76 290.0 198 68.7
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 1.7e-76 289.7 197 66.0
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 2.3e-76 289.3 197 69.0
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 3.0e-76 288.9 198 66.2
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 3.0e-76 288.9 198 68.2
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 8.7e-76 287.3 197 68.5
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 8.7e-76 287.3 198 66.2
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 8.7e-76 287.3 198 66.2
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 1.5e-75 286.6 198 67.7
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.9e-75 286.2 198 68.2
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 1.9e-75 286.2 197 65.0
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 2.5e-75 285.8 198 67.2
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 4.3e-75 285.0 196 67.9
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 7.3e-75 284.3 198 65.2
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 9.6e-75 283.9 197 67.0
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 9.6e-75 283.9 198 69.7
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 1.3e-74 283.5 198 65.7
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 1.6e-74 283.1 197 68.5
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 1.6e-74 283.1 195 66.7
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 2.1e-74 282.7 196 67.3
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 2.1e-74 282.7 197 66.5
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 3.6e-74 282.0 198 65.7
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 4.8e-74 281.6 196 65.8
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 6.2e-74 281.2 198 64.1
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 6.2e-74 281.2 198 66.7
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 6.2e-74 281.2 198 67.2
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 8.1e-74 280.8 198 64.1
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 8.1e-74 280.8 198 66.7
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 8.1e-74 280.8 197 64.0
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 1.1e-73 280.4 198 66.2
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.1e-73 280.4 198 63.6
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.8e-73 279.6 198 64.6
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 2.4e-73 279.3 198 65.7
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 2.4e-73 279.3 183 71.0
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 2.4e-73 279.3 198 63.6
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 4.0e-73 278.5 198 65.2
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 6.9e-73 277.7 196 65.3
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 6.9e-73 277.7 198 66.2
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 9.0e-73 277.3 195 66.2
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 9.0e-73 277.3 198 64.6
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 1.5e-72 276.6 198 63.1
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 4.5e-72 275.0 198 63.6
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 5.8e-72 274.6 198 65.2
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 5.8e-72 274.6 198 66.7
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 5.8e-72 274.6 197 65.5
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 7.6e-72 274.2 198 61.6
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 7.6e-72 274.2 198 66.2
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 7.6e-72 274.2 198 62.1
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 9.9e-72 273.9 198 64.6
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 1.3e-71 273.5 198 63.6
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 1.3e-71 273.5 198 65.7
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 1.3e-71 273.5 198 66.7
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 1.3e-71 273.5 198 62.6
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 2.2e-71 272.7 198 63.1
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 2.9e-71 272.3 197 62.4
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 6.4e-71 271.2 183 67.8
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 6.4e-71 271.2 197 63.5
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 6.4e-71 271.2 198 66.2
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 1.4e-70 270.0 197 61.4
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 2.4e-70 269.2 197 61.9
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 3.2e-70 268.9 192 65.6
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 3.2e-70 268.9 182 67.0
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 5.5e-70 268.1 198 61.6
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 5.5e-70 268.1 183 67.2
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 5.5e-70 268.1 191 65.4
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 7.1e-70 267.7 198 64.1
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 9.3e-70 267.3 198 64.6
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 1.6e-69 266.5 199 64.3
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 1.6e-69 266.5 197 60.9
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 2.7e-69 265.8 198 62.1
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 4.6e-69 265.0 184 66.3
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 6.0e-69 264.6 191 63.9
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 6.0e-69 264.6 189 63.5
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 7.9e-69 264.2 197 61.4
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 1.0e-68 263.8 184 64.1
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 3.9e-68 261.9 197 64.5
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 3.9e-68 261.9 191 64.9
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.9e-67 259.6 182 63.2
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 2.5e-67 259.2 197 59.9
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 3.3e-67 258.8 183 65.0
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 3.3e-67 258.8 183 65.0
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 2.1e-66 256.1 198 60.1
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 2.1e-66 256.1 185 63.8
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 2.8e-66 255.8 198 59.1
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 2.8e-66 255.8 198 61.1
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 3.7e-66 255.4 184 65.8
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 3.7e-66 255.4 198 61.1
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 6.2e-66 254.6 198 59.6
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 8.1e-66 254.2 198 58.6
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 1.4e-65 253.4 184 62.5
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 2.4e-65 252.7 198 59.1
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 4.0e-65 251.9 197 57.9
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 5.3e-65 251.5 197 58.9
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 5.3e-65 251.5 182 64.3
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 6.9e-65 251.1 183 66.1
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 9.0e-65 250.8 197 58.9
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 3.4e-64 248.8 198 58.6
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 4.5e-64 248.4 198 58.1
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 4.5e-64 248.4 198 58.1
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 7.6e-64 247.7 198 57.6
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 1.0e-63 247.3 196 58.7
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 1.3e-63 246.9 196 61.7
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 2.9e-63 245.7 184 59.8
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 6.5e-63 244.6 198 58.1
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 6.5e-63 244.6 198 57.6
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 1.0e-60 237.3 186 61.3
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 1.5e-59 233.4 183 59.0
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 1.5e-59 233.4 184 58.2
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 4.8e-58 228.4 189 58.2
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 3.1e-57 225.7 178 58.4
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 9.0e-57 224.2 196 54.6
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 3.8e-55 218.8 155 65.2
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 5.5e-54 214.9 143 65.7
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 5.5e-54 214.9 183 54.1
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 1.3e-52 210.3 141 66.0
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 1.3e-52 210.3 181 54.7
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 1.5e-51 206.8 141 66.0
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 5.7e-51 204.9 148 61.5
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 2.2e-50 203.0 169 57.4
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.1e-49 200.7 197 48.7
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 1.2e-48 197.2 144 61.1
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 1.6e-45 186.8 114 70.2
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 2.7e-45 186.0 155 60.0
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 3.3e-43 179.1 199 50.3
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 1.7e-39 166.8 98 70.4
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 3.8e-39 165.6 183 47.0
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 2.5e-38 162.9 198 44.9
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 1.1e-35 154.1 126 58.7
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 8.2e-34 147.9 190 43.7
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 1.8e-33 146.7 190 42.1
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 3.1e-25 119.4 186 37.1
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 3.1e-25 119.4 73 72.6
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 5.9e-24 115.2 68 72.1
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 1.6e-21 107.1 120 48.3
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 1.8e-20 103.6 105 50.5
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 3.4e-19 99.4 118 44.9
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 9.8e-19 97.8 104 49.0
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 7.0e-17 91.7 70 54.3
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 8.5e-15 84.7 192 32.8
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 4.2e-14 82.4 58 65.5
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 1.6e-13 80.5 64 51.6
Actinidia11311 Actinidia chinensis HOM05D004717 ORTHO05D005636 7.3e-06 55.1 43 55.8


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