Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 3.6e-146 521.5 263 100.0
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 1.3e-58 230.7 186 66.1
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 2.4e-57 226.5 186 67.2
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 1.3e-55 220.7 180 62.8
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 3.0e-55 219.5 181 62.4
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 5.0e-55 218.8 182 63.2
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 1.1e-54 217.6 186 60.8
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 4.3e-54 215.7 182 63.2
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 4.3e-54 215.7 181 61.3
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 4.3e-54 215.7 183 63.9
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 7.3e-54 214.9 182 62.1
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 2.1e-53 213.4 186 64.0
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 2.1e-53 213.4 184 62.5
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 2.1e-53 213.4 185 62.7
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 2.8e-53 213.0 116 86.2
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 3.6e-53 212.6 182 62.6
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 3.6e-53 212.6 182 60.4
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 4.7e-53 212.2 185 62.2
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 6.2e-53 211.8 184 60.3
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 6.2e-53 211.8 185 61.1
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 6.2e-53 211.8 183 62.3
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 6.2e-53 211.8 184 61.4
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 8.0e-53 211.5 182 62.6
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 1.1e-52 211.1 184 60.9
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 1.4e-52 210.7 185 60.5
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 1.8e-52 210.3 212 58.5
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 1.8e-52 210.3 185 63.2
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 1.8e-52 210.3 179 62.0
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 2.3e-52 209.9 182 62.6
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 3.1e-52 209.5 186 60.8
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 3.1e-52 209.5 141 71.6
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 5.2e-52 208.8 188 58.5
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 5.2e-52 208.8 185 61.6
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 6.8e-52 208.4 187 62.6
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 1.5e-51 207.2 179 60.3
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 1.5e-51 207.2 183 61.7
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.5e-51 207.2 155 66.5
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 2.0e-51 206.8 184 58.7
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 2.6e-51 206.5 186 59.1
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 4.4e-51 205.7 186 58.6
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 4.4e-51 205.7 192 58.9
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 5.8e-51 205.3 183 59.6
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 5.8e-51 205.3 183 60.7
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 9.8e-51 204.5 186 61.3
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 1.7e-50 203.8 188 60.1
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 1.7e-50 203.8 191 58.1
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.7e-50 203.8 165 62.4
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 2.2e-50 203.4 143 70.6
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 2.2e-50 203.4 145 68.3
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 2.2e-50 203.4 189 56.6
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 2.2e-50 203.4 183 59.6
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.2e-50 203.4 185 60.0
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 2.9e-50 203.0 185 58.9
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 2.9e-50 203.0 185 58.9
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 3.7e-50 202.6 208 53.8
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 4.9e-50 202.2 117 80.3
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 4.9e-50 202.2 190 56.8
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 6.4e-50 201.8 185 58.4
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 8.3e-50 201.4 183 59.6
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.1e-49 201.1 183 60.1
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.1e-49 201.1 182 60.4
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 1.1e-49 201.1 180 57.8
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 2.4e-49 199.9 182 59.3
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 3.2e-49 199.5 151 66.2
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 3.2e-49 199.5 181 58.6
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.1e-49 199.1 118 78.8
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 4.1e-49 199.1 184 58.2
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 5.4e-49 198.7 184 59.8
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 5.4e-49 198.7 186 58.6
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 7.0e-49 198.4 184 58.7
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 7.0e-49 198.4 151 66.2
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 7.0e-49 198.4 151 66.2
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 7.0e-49 198.4 182 59.3
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 9.2e-49 198.0 118 77.1
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 9.2e-49 198.0 184 56.5
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 1.2e-48 197.6 182 59.9
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 2.0e-48 196.8 115 78.3
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 2.0e-48 196.8 117 78.6
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 4.6e-48 195.7 141 66.0
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 6.0e-48 195.3 117 77.8
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 7.8e-48 194.9 116 78.4
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 1.7e-47 193.7 183 53.6
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 1.7e-47 193.7 113 79.6
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 2.3e-47 193.4 183 58.5
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 2.3e-47 193.4 186 57.0
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 3.0e-47 193.0 115 78.3
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 5.0e-47 192.2 184 54.9
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 5.0e-47 192.2 118 73.7
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 6.6e-47 191.8 184 53.3
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 8.6e-47 191.4 183 51.9
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 1.1e-46 191.0 114 76.3
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 1.1e-46 191.0 182 53.8
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 1.5e-46 190.7 184 55.4
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 2.5e-46 189.9 190 52.1
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 2.5e-46 189.9 188 53.7
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 3.3e-46 189.5 178 54.5
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 4.3e-46 189.1 187 54.5
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 5.6e-46 188.7 172 61.6
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 7.3e-46 188.3 179 55.3
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 7.3e-46 188.3 119 73.9
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 1.2e-45 187.6 190 51.6
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 1.6e-45 187.2 188 51.1
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 2.1e-45 186.8 182 52.2
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 2.8e-45 186.4 183 50.8
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 2.8e-45 186.4 115 73.9
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 3.6e-45 186.0 184 52.2
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 3.6e-45 186.0 183 53.6
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 4.7e-45 185.7 117 70.1
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 1.4e-44 184.1 181 54.1
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 4.0e-44 182.6 117 73.5
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 1.3e-42 177.6 167 58.7
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 4.9e-42 175.6 176 50.6
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 4.1e-41 172.6 115 71.3
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 7.1e-41 171.8 123 65.0
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 4.6e-40 169.1 109 70.6
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 3.3e-38 162.9 116 62.9
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 1.2e-35 154.5 117 59.0
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 9.9e-35 151.4 110 62.7
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 1.7e-34 150.6 186 49.5
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 6.4e-34 148.7 112 66.1
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 2.4e-33 146.7 109 61.5
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 6.6e-31 138.7 106 56.6
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 8.1e-21 105.1 59 81.4
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 8.1e-21 105.1 59 81.4
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 3.4e-19 99.8 148 43.9
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 4.6e-16 89.4 60 70.0
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 1.3e-13 81.3 52 71.2
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 1.4e-12 77.8 108 46.3
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 2.9e-10 70.1 71 54.9
unitig_22.g6304 Utricularia gibba HOM05D006027 ORTHO05D422202 7.4e-06 55.5 41 63.4


User provided reference genes

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