Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3060 Utricularia gibba HOM05D003163 ORTHO05D003504 2.8e-67 258.5 129 100.0
SalBow5G3744 Salvia bowleyana HOM05D003163 ORTHO05D003504 3.5e-33 145.2 126 65.1
MSTRG.14629 Avicennia marina HOM05D003163 ORTHO05D003504 2.3e-32 142.5 138 60.9
Nitab4.5_0002358g0040 Nicotiana tabacum HOM05D001141 ORTHO05D003504 1.6e-30 136.3 71 91.5
Nitab4.5_0000003g0760 Nicotiana tabacum HOM05D001141 ORTHO05D003504 2.8e-30 135.6 113 62.8
SGA_v2.0_scaffold90G27859 Striga asiatica HOM05D003163 ORTHO05D003504 2.8e-30 135.6 71 90.1
Cc04_g11780 Coffea canephora HOM05D003163 ORTHO05D003504 6.1e-30 134.4 72 86.1
Oeu023449.1 Olea europaea HOM05D003163 ORTHO05D003504 6.1e-30 134.4 72 87.5
PGSC0003DMG400026990 Solanum tuberosum HOM05D003163 ORTHO05D003504 4.0e-29 131.7 69 89.9
CAN.G993.27 Capsicum annuum HOM05D003163 ORTHO05D003504 5.2e-29 131.3 109 60.6
Migut.O00141 Erythranthe guttata HOM05D003163 ORTHO05D003504 5.2e-29 131.3 71 87.3
Solyc06g071670.1 Solanum lycopersicum HOM05D003163 ORTHO05D003504 5.2e-29 131.3 71 85.9
Sopen06g027980 Solanum pennellii HOM05D003163 ORTHO05D003504 5.2e-29 131.3 71 85.9
Dinv38549 Davidia involucrata HOM05D003163 ORTHO05D003504 3.4e-28 128.6 72 86.1
Peaxi162Scf00689g00010 Petunia axillaris HOM05D003163 ORTHO05D003504 4.4e-28 128.3 110 60.0
Cpa.g.sc110.14 Carica papaya HOM05D003163 ORTHO05D003504 4.9e-27 124.8 76 77.6
Phvul.003G203700 Phaseolus vulgaris HOM05D003163 ORTHO05D003504 4.9e-27 124.8 113 57.5
CSS0045781 Camellia sinensis var. sinensis HOM05D003163 ORTHO05D003504 1.1e-26 123.6 71 83.1
Ca_14265_v3 Cicer arietinum L. HOM05D003163 ORTHO05D003504 1.1e-26 123.6 71 81.7
Lalb_Chr07g0182921 Lupinus albus HOM05D003163 ORTHO05D003504 1.1e-26 123.6 104 57.7
CSS0002386 Camellia sinensis var. sinensis HOM05D003163 ORTHO05D003504 2.4e-26 122.5 121 56.2
Potri.015G082432 Populus trichocarpa HOM05D003163 ORTHO05D003504 3.1e-26 122.1 71 80.3
CARHR276940 Cardamine hirsuta HOM05D003163 ORTHO05D003504 4.1e-26 121.7 72 79.2
CiPaw.11G021900 Carya illinoinensis HOM05D003163 ORTHO05D003504 5.4e-26 121.3 114 57.9
AUR62028739 Chenopodium quinoa HOM05D003163 ORTHO05D003504 5.4e-26 121.3 127 54.3
AUR62008159 Chenopodium quinoa HOM05D003163 ORTHO05D003504 7.0e-26 120.9 115 55.7
Lj4g0004164 Lotus japonicus HOM05D003163 ORTHO05D003504 7.0e-26 120.9 71 80.3
PSO832G3605 Papaver somniferum HOM05D003163 ORTHO05D003504 7.0e-26 120.9 86 66.3
QL10p007898 Quercus lobata HOM05D003163 ORTHO05D003504 7.0e-26 120.9 77 75.3
TPR.G37515 Trifolium pratense HOM05D003163 ORTHO05D003504 7.0e-26 120.9 107 57.9
AT5G63100 Arabidopsis thaliana HOM05D003163 ORTHO05D003504 9.2e-26 120.6 74 74.3
PSO384G3827 Papaver somniferum HOM05D003163 ORTHO05D003504 9.2e-26 120.6 71 77.5
Psat4g059560 Pisum sativum HOM05D003163 ORTHO05D003504 1.2e-25 120.2 71 78.9
Duzib068G0058 Durio zibethinus HOM05D003163 ORTHO05D003504 1.6e-25 119.8 71 77.5
Eucgr.K02808 Eucalyptus grandis HOM05D003163 ORTHO05D003504 1.6e-25 119.8 107 58.9
Thecc.03G021400 Theobroma cacao HOM05D003163 ORTHO05D003504 1.6e-25 119.8 112 54.5
TWI39G1165 Tripterygium wilfordii HOM05D003163 ORTHO05D003504 1.6e-25 119.8 114 53.5
Manes.14G061900 Manihot esculenta HOM05D003163 ORTHO05D003504 2.0e-25 119.4 71 78.9
RcHm_v2.0_Chr7g0192811 Rosa chinensis HOM05D003163 ORTHO05D003504 2.0e-25 119.4 91 62.6
AL8G40160 Arabidopsis lyrata HOM05D003163 ORTHO05D003504 2.7e-25 119.0 74 73.0
C09p09160 Brassica napus HOM05D003163 ORTHO05D003504 2.7e-25 119.0 106 55.7
BolC9t53829H Brassica oleracea HOM05D003163 ORTHO05D003504 2.7e-25 119.0 106 55.7
CDE05G0716 Ceratophyllum demersum HOM05D000044 ORTHO05D003504 2.7e-25 119.0 97 63.9
CsaV3_1G008760 Cucumis sativus L. HOM05D003163 ORTHO05D003504 2.7e-25 119.0 71 78.9
Glyma.17G085800 Glycine max HOM05D003163 ORTHO05D003504 2.7e-25 119.0 105 57.1
Gohir.D08G107900 Gossypium hirsutum HOM05D003163 ORTHO05D003504 2.7e-25 119.0 71 77.5
Gorai.004G115500 Gossypium raimondii HOM05D003163 ORTHO05D003504 2.7e-25 119.0 71 77.5
Nn4g22643 Nelumbo nucifera HOM05D003163 ORTHO05D003504 2.7e-25 119.0 99 59.6
Medtr4g105140 Medicago truncatula HOM05D003163 ORTHO05D003504 3.5e-25 118.6 109 57.8
Sc10g0010180 Simmondsia chinensis HOM05D003163 ORTHO05D003504 3.5e-25 118.6 71 78.9
MBI10_g00740_MAGBIO Magnolia biondii HOM05D003163 ORTHO05D003504 4.5e-25 118.2 97 60.8
Sabra15G0105900 Salix brachista HOM05D003163 ORTHO05D003504 4.5e-25 118.2 71 77.5
Sp2g26230 Schrenkiella parvula HOM05D003163 ORTHO05D003504 4.5e-25 118.2 72 75.0
BcaB04g19940 Brassica carinata HOM05D003163 ORTHO05D003504 5.9e-25 117.9 72 73.6
Ah.02g110700 Amaranthus hybridus HOM05D003163 ORTHO05D003504 7.8e-25 117.5 76 72.4
A09p08100 Brassica napus HOM05D003163 ORTHO05D003504 7.8e-25 117.5 106 57.5
BraA09t36461Z Brassica rapa HOM05D003163 ORTHO05D003504 7.8e-25 117.5 106 57.5
Carub.0008s2385 Capsella rubella HOM05D003163 ORTHO05D003504 7.8e-25 117.5 72 73.6
MELO3C002291.2 Cucumis melo HOM05D003163 ORTHO05D003504 7.8e-25 117.5 71 77.5
DCAR_021578 Daucus carota HOM05D003163 ORTHO05D003504 7.8e-25 117.5 71 77.5
Lj9P444T58 Lonicera japonica HOM05D003163 ORTHO05D003504 1.0e-24 117.1 71 77.5
ECA232G2180 Erigeron canadensis HOM05D000637 ORTHO05D002686 1.3e-24 116.7 71 76.1
GSVIVG01007672001 Vitis vinifera HOM05D003163 ORTHO05D003504 1.3e-24 116.7 71 77.5
COL.COLO4_30161 Corchorus olitorius HOM05D003163 ORTHO05D003504 1.7e-24 116.3 71 74.6
Haze_00412 Corylus avellana HOM05D003163 ORTHO05D003504 1.7e-24 116.3 72 79.2
Thhalv10005653m.g Eutrema salsugineum HOM05D003163 ORTHO05D003504 1.7e-24 116.3 72 73.6
Gohir.A08G097848 Gossypium hirsutum HOM05D003163 ORTHO05D003504 1.7e-24 116.3 71 76.1
Prupe.5G167300 Prunus persica HOM05D003163 ORTHO05D009144 1.7e-24 116.3 71 77.5
THA.LOC104798967 Tarenaya hassleriana HOM05D003163 ORTHO05D003504 1.7e-24 116.3 72 75.0
Lsat_1_v5_gn_4_77041 Lactuca sativa HOM05D003163 ORTHO05D003504 2.3e-24 115.9 119 54.6
PGR044G2024 Punica granatum HOM05D003163 ORTHO05D003504 2.3e-24 115.9 112 61.6
ClCG01G013410 Citrullus lanatus HOM05D003163 ORTHO05D003504 2.9e-24 115.5 109 53.2
MD06G1167600 Malus domestica HOM05D003163 ORTHO05D003504 2.9e-24 115.5 71 76.1
Sed0004811 Sechium edule HOM05D003163 ORTHO05D003504 2.9e-24 115.5 71 76.1
Atru.chr9.2554 Acer truncatum HOM05D003163 ORTHO05D003504 3.8e-24 115.2 71 73.2
Aqoxy5G03795 Aquilegia oxysepala HOM05D003163 ORTHO05D003504 3.8e-24 115.2 119 47.1
FvH4_5g06050 Fragaria vesca HOM05D003163 ORTHO05D003504 3.8e-24 115.2 71 76.1
CANSAT21G1563 Cannabis sativa HOM05D003163 ORTHO05D003504 6.6e-24 114.4 71 76.1
VMungo1215G1835 Vigna mungo HOM05D003163 ORTHO05D003504 6.6e-24 114.4 71 76.1
Cfa016044 Carpinus fangiana HOM05D003163 ORTHO05D003504 8.6e-24 114.0 72 76.4
Rhsim08G0176100 Rhododendron simsii HOM05D003163 ORTHO05D003504 1.5e-23 113.2 112 55.4
TAR374G0422 Trochodendron aralioides HOM05D003163 ORTHO05D003504 1.5e-23 113.2 71 76.1
Ciclev10021214m.g Citrus clementina HOM05D003163 ORTHO05D003504 5.6e-23 111.3 71 69.0
Aa31LG1G18870 Aethionema arabicum HOM05D001141 ORTHO05D001088 1.2e-22 110.2 71 70.4
CDE11G1064 Ceratophyllum demersum HOM05D003163 ORTHO05D003504 3.6e-22 108.6 71 73.2
vmacro19317 Vaccinium macrocarpon HOM05D003163 ORTHO05D003504 3.6e-22 108.6 74 73.0
MD14G1173100 Malus domestica HOM05D003163 ORTHO05D003504 6.4e-19 97.8 67 70.1
Ah.14g078620 Amaranthus hybridus HOM05D003163 ORTHO05D003504 5.4e-18 94.7 76 64.5
SEGI_26446 Sequoiadendron giganteum HOM05D003163 ORTHO05D003504 4.6e-17 91.7 114 43.9
SMO358G0730 Selaginella moellendorffii HOM05D003163 ORTHO05D003504 7.8e-17 90.9 65 64.6
FAN04G3202 Fragaria x ananassa HOM05D001141 ORTHO05D003504 3.0e-16 89.0 50 82.0
Mapoly0036s0150 Marchantia polymorpha HOM05D003163 ORTHO05D003504 3.3e-15 85.5 94 44.7
Pp3c1_890 Physcomitrium patens HOM05D003163 ORTHO05D003504 1.2e-14 83.6 71 52.1
Pp3c5_18300 Physcomitrium patens HOM05D003163 ORTHO05D003504 1.7e-11 73.2 62 53.2
Os02g0489500 Oryza sativa ssp. japonica HOM05D003163 ORTHO05D003504 4.9e-11 71.6 70 55.7
AagrBONN_evm.TU.Sc2ySwM_228.1392 Anthoceros agrestis HOM05D003163 ORTHO05D003504 3.6e-06 55.5 90 35.6


User provided reference genes

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