Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3032 Utricularia gibba HOM05D004830 ORTHO05D005310 1.8e-113 412.5 204 100.0
Migut.I00505 Erythranthe guttata HOM05D004830 ORTHO05D005310 3.2e-57 225.7 187 59.4
MSTRG.11282 Avicennia marina HOM05D004830 ORTHO05D005310 4.2e-57 225.3 187 61.5
Oeu056012.1 Olea europaea HOM05D004830 ORTHO05D005310 7.4e-54 214.5 187 58.8
Actinidia08868 Actinidia chinensis HOM05D004830 ORTHO05D005310 3.1e-52 209.1 180 58.3
Rhsim12G0174200 Rhododendron simsii HOM05D004830 ORTHO05D005310 5.3e-52 208.4 196 55.1
Lj5A97T92 Lonicera japonica HOM05D004830 ORTHO05D005310 4.5e-51 205.3 190 56.3
CSS0034026 Camellia sinensis var. sinensis HOM05D004830 ORTHO05D005310 1.7e-50 203.4 183 55.2
Atru.chr9.1044 Acer truncatum HOM05D004830 ORTHO05D005310 8.4e-50 201.1 194 54.6
CiPaw.11G008200 Carya illinoinensis HOM05D004830 ORTHO05D005310 1.1e-49 200.7 181 55.8
Manes.14G051600 Manihot esculenta HOM05D004830 ORTHO05D005310 1.4e-49 200.3 196 52.0
Cfa018828 Carpinus fangiana HOM05D004830 ORTHO05D005310 1.2e-48 197.2 181 55.2
QL10p003269 Quercus lobata HOM05D004830 ORTHO05D005310 3.5e-48 195.7 181 54.7
TAR622G0015 Trochodendron aralioides HOM05D004830 ORTHO05D005310 5.1e-47 191.8 184 51.6
Cpa.g.sc13.124 Carica papaya HOM05D004830 ORTHO05D005310 6.7e-47 191.4 180 56.1
Cc00_g11930 Coffea canephora HOM05D004830 ORTHO05D005310 8.7e-47 191.0 202 49.5
Aqoxy5G03391 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 1.5e-46 190.3 203 48.3
Potri.012G097200 Populus trichocarpa HOM05D004830 ORTHO05D005310 1.5e-46 190.3 181 53.6
ATR0561G210 Amborella trichopoda HOM05D004830 ORTHO05D005310 1.9e-46 189.9 185 51.9
QL10p003237 Quercus lobata HOM05D004830 ORTHO05D005310 9.6e-46 187.6 181 53.0
GSVIVG01008536001 Vitis vinifera HOM05D004830 ORTHO05D005310 9.6e-46 187.6 195 50.3
Thecc.03G128400 Theobroma cacao HOM05D004830 ORTHO05D005310 1.3e-45 187.2 181 51.9
Duzib084G0035 Durio zibethinus HOM05D004830 ORTHO05D005310 2.1e-45 186.4 181 51.4
QL10p003210 Quercus lobata HOM05D004830 ORTHO05D005310 2.1e-45 186.4 196 50.0
MD06G1142500 Malus domestica HOM05D004830 ORTHO05D005310 4.8e-45 185.3 198 49.5
VMungo1309G0155 Vigna mungo HOM05D004830 ORTHO05D005310 8.2e-45 184.5 181 51.9
RcHm_v2.0_Chr7g0190301 Rosa chinensis HOM05D004830 ORTHO05D005310 1.8e-44 183.3 181 51.9
COL.COLO4_28101 Corchorus olitorius HOM05D004830 ORTHO05D005310 2.4e-44 183.0 183 50.3
Prupe.5G151800 Prunus persica HOM05D004830 ORTHO05D005310 2.4e-44 183.0 183 50.3
Lj1g0026153 Lotus japonicus HOM05D004830 ORTHO05D005310 4.1e-44 182.2 181 52.5
Nitab4.5_0002855g0030 Nicotiana tabacum HOM05D004830 ORTHO05D005310 4.1e-44 182.2 185 50.3
Phvul.009G166700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 4.1e-44 182.2 181 51.4
Glyma.06G170600 Glycine max HOM05D004830 ORTHO05D005310 5.3e-44 181.8 186 50.0
Nitab4.5_0002062g0020 Nicotiana tabacum HOM05D004830 ORTHO05D005310 6.9e-44 181.4 182 51.1
ATR0332G003 Amborella trichopoda HOM05D004830 ORTHO05D005310 9.0e-44 181.0 185 50.8
Aqoxy7G00964 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 9.0e-44 181.0 184 50.0
Eucgr.K02732 Eucalyptus grandis HOM05D004830 ORTHO05D005310 2.0e-43 179.9 184 51.1
vmacro16674 Vaccinium macrocarpon HOM05D004830 ORTHO05D005310 2.0e-43 179.9 159 56.6
Peaxi162Scf00536g00113 Petunia axillaris HOM05D004830 ORTHO05D005310 3.4e-43 179.1 182 51.1
Ciclev10022323m.g Citrus clementina HOM05D004830 ORTHO05D005310 4.5e-43 178.7 182 50.0
Glyma.04G195400 Glycine max HOM05D004830 ORTHO05D005310 4.5e-43 178.7 179 50.3
Os08g0530500 Oryza sativa ssp. japonica HOM05D004830 ORTHO05D005310 4.5e-43 178.7 181 54.1
arahy.Tifrunner.gnm1.ann1.CC2DBD Arachis hypogaea HOM05D004830 ORTHO05D005310 5.9e-43 178.3 179 50.3
Ca_24504_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 7.6e-43 177.9 176 51.7
arahy.Tifrunner.gnm1.ann1.228PAQ Arachis hypogaea HOM05D004830 ORTHO05D005310 1.0e-42 177.6 179 50.3
FAN13G1978 Fragaria x ananassa HOM05D004830 ORTHO05D005310 2.2e-42 176.4 196 48.5
Medtr3g089170 Medicago truncatula HOM05D004830 ORTHO05D005310 2.9e-42 176.0 179 52.0
Lsat_1_v5_gn_4_80120 Lactuca sativa HOM05D004830 ORTHO05D005310 6.5e-42 174.9 162 53.1
Lalb_Chr11g0069591 Lupinus albus HOM05D004830 ORTHO05D005310 1.1e-41 174.1 176 50.6
Gohir.A03G052400 Gossypium hirsutum HOM05D004830 ORTHO05D005310 1.4e-41 173.7 181 49.2
MBI13_g01839_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 2.5e-41 172.9 136 64.0
FvH4_5g08220 Fragaria vesca HOM05D004830 ORTHO05D005310 4.2e-41 172.2 181 50.3
FAN18G1516 Fragaria x ananassa HOM05D004830 ORTHO05D005310 5.5e-41 171.8 181 50.3
Gorai.003G121000 Gossypium raimondii HOM05D004830 ORTHO05D005310 7.2e-41 171.4 181 49.2
PSO782G4089 Papaver somniferum HOM05D004830 ORTHO05D005310 3.6e-40 169.1 182 48.4
PSO063G3292 Papaver somniferum HOM05D004830 ORTHO05D005310 7.9e-40 167.9 182 47.8
CDE02G3469 Ceratophyllum demersum HOM05D004830 ORTHO05D005310 1.3e-39 167.2 181 47.0
HanXRQChr09g0273121 Helianthus annuus HOM05D004830 ORTHO05D005310 1.8e-39 166.8 157 52.2
FAN08G1417 Fragaria x ananassa HOM05D004830 ORTHO05D005310 3.9e-39 165.6 176 50.6
ECA232G3637 Erigeron canadensis HOM05D004830 ORTHO05D005310 6.7e-39 164.9 162 50.6
PGR044G2645 Punica granatum HOM05D004830 ORTHO05D005310 6.7e-39 164.9 201 44.8
MBI11_g07465_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 4.5e-35 152.1 136 58.8
Haze_07222 Corylus avellana HOM05D004830 ORTHO05D005310 1.8e-31 140.2 156 49.4
SEGI_37187 Sequoiadendron giganteum HOM05D004830 ORTHO05D005310 5.5e-25 118.6 116 47.4
Nn7g37285 Nelumbo nucifera HOM05D004830 ORTHO05D005310 1.6e-24 117.1 177 36.2
Gohir.D11G237500 Gossypium hirsutum HOM05D004830 ORTHO05D005310 5.2e-23 112.1 115 47.0
Gorai.007G250900 Gossypium raimondii HOM05D004830 ORTHO05D005310 5.2e-23 112.1 115 47.0
Nn3g16476 Nelumbo nucifera HOM05D004830 ORTHO05D005310 1.5e-22 110.5 162 39.5
Cpa.g.sc73.42 Carica papaya HOM05D004830 ORTHO05D005310 3.3e-22 109.4 121 44.6
Gohir.A11G224212 Gossypium hirsutum HOM05D004830 ORTHO05D005310 3.3e-22 109.4 114 46.5
COL.COLO4_33470 Corchorus olitorius HOM05D004830 ORTHO05D005310 9.7e-22 107.8 112 43.8
Thecc.05G236700 Theobroma cacao HOM05D004830 ORTHO05D005310 9.7e-22 107.8 112 45.5
Prupe.1G058500 Prunus persica HOM05D004830 ORTHO05D005310 1.3e-21 107.5 191 34.6
ATR0307G071 Amborella trichopoda HOM05D004830 ORTHO05D005310 3.7e-21 105.9 113 45.1
Dinv23140 Davidia involucrata HOM05D004830 ORTHO05D005310 4.8e-21 105.5 113 49.6
Haze_20367 Corylus avellana HOM05D004830 ORTHO05D005310 6.3e-21 105.1 113 44.2
QL07p015956 Quercus lobata HOM05D004830 ORTHO05D005310 6.3e-21 105.1 125 41.6
GSVIVG01029897001 Vitis vinifera HOM05D004830 ORTHO05D005310 8.2e-21 104.8 115 40.9
Lj1g0023159 Lotus japonicus HOM05D004830 ORTHO05D005310 1.1e-20 104.4 122 44.3
Duzib106G0998 Durio zibethinus HOM05D004830 ORTHO05D005310 2.4e-20 103.2 112 42.0
Aqoxy2G00040 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 4.1e-20 102.4 121 39.7
Lalb_Chr22g0358351 Lupinus albus HOM05D004830 ORTHO05D005310 4.1e-20 102.4 104 46.2
TAR633G1142 Trochodendron aralioides HOM05D004830 ORTHO05D005310 4.1e-20 102.4 109 42.2
Manes.08G155600 Manihot esculenta HOM05D004830 ORTHO05D005310 5.3e-20 102.1 120 39.2
TWI34G0970 Tripterygium wilfordii HOM05D004830 ORTHO05D005310 7.0e-20 101.7 112 42.9
arahy.Tifrunner.gnm1.ann1.TSAG7F Arachis hypogaea HOM05D004830 ORTHO05D005310 2.0e-19 100.1 112 43.8
CiPaw.09G053100 Carya illinoinensis HOM05D004830 ORTHO05D005310 3.5e-19 99.4 102 45.1
MBI19_g09302_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 3.5e-19 99.4 108 39.8
MBI19_g15087_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 3.5e-19 99.4 108 39.8
Psat3g084280 Pisum sativum HOM05D004830 ORTHO05D005310 1.0e-18 97.8 108 41.7
Dinv14555 Davidia involucrata HOM05D004830 ORTHO05D005310 1.3e-18 97.4 112 42.0
PSO591G0293 Papaver somniferum HOM05D004830 ORTHO05D005310 1.3e-18 97.4 122 39.3
Ca_03431_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 5.0e-18 95.5 127 36.2
TPR.G23653 Trifolium pratense HOM05D004830 ORTHO05D005310 6.5e-18 95.1 125 40.0
Prupe.7G025800 Prunus persica HOM05D004830 ORTHO05D005310 8.5e-18 94.7 117 43.6
PSO832G0423 Papaver somniferum HOM05D004830 ORTHO05D005310 1.1e-17 94.4 122 37.7
Potri.013G068900 Populus trichocarpa HOM05D004830 ORTHO05D005310 1.5e-17 94.0 108 41.7
Migut.J01591 Erythranthe guttata HOM05D004830 ORTHO05D005310 1.9e-17 93.6 111 42.3
MD14G1012800 Malus domestica HOM05D004830 ORTHO05D005310 2.5e-17 93.2 115 42.6
MSTRG.6264 Avicennia marina HOM05D004830 ORTHO05D005310 4.2e-17 92.4 111 42.3
Atru.chr2.1607 Acer truncatum HOM05D004830 ORTHO05D005310 7.2e-17 91.7 116 37.1
RcHm_v2.0_Chr3g0495501 Rosa chinensis HOM05D004830 ORTHO05D005310 7.2e-17 91.7 214 29.0
FvH4_1g29410 Fragaria vesca HOM05D004830 ORTHO05D005310 9.4e-17 91.3 216 29.6
FAN19G2808 Fragaria x ananassa HOM05D004830 ORTHO05D005310 9.4e-17 91.3 216 29.6
FAN26G1469 Fragaria x ananassa HOM05D004830 ORTHO05D005310 1.2e-16 90.9 116 40.5
FAN28G2201 Fragaria x ananassa HOM05D004830 ORTHO05D005310 1.2e-16 90.9 119 41.2
Sabra13G0059800 Salix brachista HOM05D004830 ORTHO05D005310 4.7e-16 89.0 108 40.7
Zm00001eb036570 Zea mays HOM05D004830 ORTHO05D005310 8.0e-16 88.2 227 30.4
Gohir.D06G037550 Gossypium hirsutum HOM05D004830 ORTHO05D005310 1.4e-15 87.4 111 43.2
Glyma.19G121200 Glycine max HOM05D004830 ORTHO05D005310 3.0e-15 86.3 118 39.0
Ciclev10032343m.g Citrus clementina HOM05D004830 ORTHO05D005310 8.8e-15 84.7 107 39.3
PGR042G2697 Punica granatum HOM05D004830 ORTHO05D005310 3.3e-14 82.8 121 34.7
Gohir.D03G114700 Gossypium hirsutum HOM05D004830 ORTHO05D005310 9.7e-14 81.3 108 43.5
Medtr7g087480 Medicago truncatula HOM05D004830 ORTHO05D005310 4.8e-13 79.0 102 39.2
RhsimUnG0023100 Rhododendron simsii HOM05D004830 ORTHO05D005310 3.1e-12 76.3 137 32.1
TPR.G26134 Trifolium pratense HOM05D004830 ORTHO05D005310 3.1e-12 76.3 56 58.9
TPR.G26160 Trifolium pratense HOM05D004830 ORTHO05D005310 3.5e-11 72.8 127 35.4
Phvul.001G101700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 4.5e-11 72.4 111 36.0
Eucgr.A02163 Eucalyptus grandis HOM05D004830 ORTHO05D005310 1.7e-10 70.5 102 36.3
Gohir.D08G162001 Gossypium hirsutum HOM05D004830 ORTHO05D005310 6.5e-10 68.6 57 54.4
VMungo1383G2348 Vigna mungo HOM05D004830 ORTHO05D005310 1.5e-09 67.4 108 36.1
Cfa019887 Carpinus fangiana HOM05D004830 ORTHO05D005310 4.2e-09 65.9 106 36.8
AagrBONN_evm.TU.Sc2ySwM_344.609 Anthoceros agrestis HOM05D004830 ORTHO05D005310 1.0e-07 61.2 124 33.1
Psat5g140640 Pisum sativum HOM05D004830 ORTHO05D005310 4.4e-06 55.8 93 37.6


User provided reference genes

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