Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 2.0e-138 495.7 245 100.0
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 5.9e-82 308.1 189 77.2
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 3.7e-76 288.9 246 64.2
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 2.1e-71 273.1 245 58.8
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 8.0e-71 271.2 222 62.6
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 1.4e-70 270.4 238 59.7
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 2.3e-70 269.6 190 68.9
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 6.7e-70 268.1 219 63.9
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 1.2e-69 267.3 220 61.8
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 4.4e-69 265.4 236 58.1
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.7e-68 263.5 190 67.9
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 6.3e-68 261.5 187 70.1
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 8.2e-68 261.2 191 66.5
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 8.2e-68 261.2 191 66.5
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.1e-67 260.8 188 67.6
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 1.4e-67 260.4 190 67.4
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 1.4e-67 260.4 200 64.0
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.8e-67 260.0 190 67.4
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 2.4e-67 259.6 192 66.1
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 3.1e-67 259.2 190 65.8
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 4.1e-67 258.8 185 69.2
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 2.0e-66 256.5 192 65.1
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 2.7e-66 256.1 189 67.2
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 2.7e-66 256.1 190 66.3
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 4.5e-66 255.4 188 66.5
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 4.5e-66 255.4 196 63.8
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 5.9e-66 255.0 247 55.1
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 1.0e-65 254.2 240 55.4
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 1.3e-65 253.8 240 53.8
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 2.9e-65 252.7 190 64.2
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 5.0e-65 251.9 186 66.7
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 6.5e-65 251.5 199 60.8
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 6.5e-65 251.5 241 57.3
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 8.5e-65 251.1 190 65.8
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 8.5e-65 251.1 173 69.9
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 1.5e-64 250.4 199 63.3
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 1.5e-64 250.4 193 63.2
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 1.5e-64 250.4 185 67.0
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 2.5e-64 249.6 185 67.0
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.2e-64 249.2 240 54.6
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 4.2e-64 248.8 187 65.8
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 5.5e-64 248.4 171 67.8
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 5.5e-64 248.4 185 64.3
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 7.2e-64 248.1 186 66.7
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 7.2e-64 248.1 186 64.0
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 7.2e-64 248.1 188 65.4
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 1.6e-63 246.9 246 56.5
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.6e-63 246.9 240 54.2
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.6e-63 246.9 240 54.2
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 2.1e-63 246.5 191 64.4
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 2.1e-63 246.5 185 64.9
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 4.7e-63 245.4 246 55.7
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 4.7e-63 245.4 193 63.7
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 6.1e-63 245.0 193 62.2
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 6.1e-63 245.0 195 62.1
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 1.4e-62 243.8 240 53.3
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 1.8e-62 243.4 244 52.9
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 1.8e-62 243.4 190 62.1
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 2.3e-62 243.0 195 62.1
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 4.0e-62 242.3 294 47.3
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.2e-61 240.7 190 62.1
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 1.5e-61 240.4 177 65.5
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 2.6e-61 239.6 186 64.5
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.7e-61 238.4 240 52.9
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 3.1e-59 232.6 210 56.7
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 3.1e-59 232.6 190 61.6
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 1.2e-58 230.7 188 61.2
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 5.9e-58 228.4 177 66.7
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 7.7e-58 228.0 190 57.9
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 1.0e-57 227.6 152 67.8
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 3.6e-55 219.2 177 59.3
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 3.6e-55 219.2 177 60.5
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 1.4e-54 217.2 186 57.0
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 8.8e-54 214.5 177 58.2
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 1.5e-53 213.8 182 62.1
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 5.7e-53 211.8 135 70.4
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 7.5e-53 211.5 186 57.5
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 9.8e-53 211.1 192 55.7
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 2.8e-52 209.5 239 49.4
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 6.3e-52 208.4 186 54.3
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 1.8e-51 206.8 188 54.8
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 5.4e-51 205.3 185 56.8
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 7.0e-51 204.9 192 55.7
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 7.0e-51 204.9 186 57.0
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 1.2e-50 204.1 137 69.3
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 3.5e-50 202.6 185 55.7
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 7.8e-50 201.4 192 54.7
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 7.8e-50 201.4 192 54.7
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 5.0e-49 198.7 188 54.8
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 5.6e-48 195.3 188 56.4
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 1.2e-39 167.5 148 54.7
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 6.2e-39 165.2 186 52.7
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 3.7e-36 156.0 98 70.4
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 2.7e-34 149.8 98 66.3
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 3.5e-34 149.4 159 47.8
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 6.6e-33 145.2 212 40.1
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 2.6e-29 133.3 135 51.9
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 6.4e-28 128.6 160 41.9
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 7.1e-27 125.2 116 59.5
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 2.7e-26 123.2 101 59.4
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 5.2e-22 109.0 60 80.0
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.5e-21 107.5 64 71.9
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 8.4e-20 101.7 113 45.1
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 4.6e-18 95.9 93 54.8
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 3.0e-17 93.2 101 50.5
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 3.4e-13 79.7 75 57.3
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 7.1e-11 72.0 62 56.5
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.6e-10 70.9 69 55.1
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.0e-09 66.6 61 54.1
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 2.8e-07 60.1 77 46.8
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 6.2e-07 58.9 102 34.3
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 6.9e-06 55.5 154 29.9


User provided reference genes

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