Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3025 Utricularia gibba HOM05D002285 ORTHO05D004192 2.2e-76 288.9 147 100.0
unitig_22.g6247 Utricularia gibba HOM05D002285 ORTHO05D004192 7.9e-58 227.3 144 80.6
MSTRG.11320 Avicennia marina HOM05D002285 ORTHO05D004192 4.2e-43 178.3 128 68.0
Aqoxy2G00069 Aquilegia oxysepala HOM05D002285 ORTHO05D004192 2.6e-40 169.1 128 64.8
Lalb_Chr20g0123651 Lupinus albus HOM05D002285 ORTHO05D004192 9.7e-40 167.2 128 67.2
Sc09g0004710 Simmondsia chinensis HOM05D002285 ORTHO05D004192 9.7e-40 167.2 129 63.6
CSS0011301 Camellia sinensis var. sinensis HOM05D002285 ORTHO05D004192 3.7e-39 165.2 129 65.1
VMungo0540G1611 Vigna mungo HOM05D002285 ORTHO05D004192 8.2e-39 164.1 128 68.0
Phvul.006G217200 Phaseolus vulgaris HOM05D002285 ORTHO05D004192 1.4e-38 163.3 128 68.0
vmacro09396 Vaccinium macrocarpon HOM05D002285 ORTHO05D004192 1.4e-38 163.3 131 63.4
GSVIVG01012187001 Vitis vinifera HOM05D002285 ORTHO05D004192 1.8e-38 162.9 128 64.8
Glyma.12G168800 Glycine max HOM05D002285 ORTHO05D004192 2.4e-38 162.5 128 67.2
Rhsim04G0038900 Rhododendron simsii HOM05D002285 ORTHO05D004192 2.4e-38 162.5 132 63.6
Ah.14g085290 Amaranthus hybridus HOM05D002285 ORTHO05D004192 3.1e-38 162.2 130 62.3
Oeu050118.1 Olea europaea HOM05D002285 ORTHO05D004192 3.1e-38 162.2 131 63.4
Manes.15G172900 Manihot esculenta HOM05D002285 ORTHO05D004192 4.1e-38 161.8 128 61.7
EL10Ac1g01198 Beta vulgaris HOM05D002285 ORTHO05D004192 5.3e-38 161.4 128 62.5
EL10Ac1g01199 Beta vulgaris HOM05D002285 ORTHO05D004192 5.3e-38 161.4 128 62.5
Lj9P652T21 Lonicera japonica HOM05D002285 ORTHO05D004192 5.3e-38 161.4 132 64.4
Ah.09g228410 Amaranthus hybridus HOM05D002285 ORTHO05D004192 9.1e-38 160.6 144 56.2
Hma1.2p1_0233F.1_g098050 Hydrangea macrophylla HOM05D002285 ORTHO05D004192 9.1e-38 160.6 131 61.1
Lsat_1_v5_gn_3_22761 Lactuca sativa HOM05D002285 ORTHO05D004192 9.1e-38 160.6 132 60.6
Ca_15481_v3 Cicer arietinum L. HOM05D002285 ORTHO05D004192 1.2e-37 160.2 131 67.9
Dinv04986 Davidia involucrata HOM05D002285 ORTHO05D004192 1.2e-37 160.2 128 63.3
Migut.I00387 Erythranthe guttata HOM05D002285 ORTHO05D004192 1.6e-37 159.8 130 63.8
HanXRQChr03g0084781 Helianthus annuus HOM05D002285 ORTHO05D004192 1.6e-37 159.8 128 60.9
ClCG05G009460 Citrullus lanatus HOM05D002285 ORTHO05D004192 2.0e-37 159.5 128 62.5
Ciclev10011261m.g Citrus clementina HOM05D002285 ORTHO05D004192 2.6e-37 159.1 141 57.4
QL06p001430 Quercus lobata HOM05D002285 ORTHO05D004192 2.6e-37 159.1 128 63.3
Glyma.08G188900 Glycine max HOM05D002285 ORTHO05D004192 3.5e-37 158.7 128 65.6
SGA_v2.0_scaffold19G08809 Striga asiatica HOM05D002285 ORTHO05D004192 3.5e-37 158.7 131 63.4
Duzib114G1054 Durio zibethinus HOM05D002285 ORTHO05D004192 4.5e-37 158.3 128 62.5
Potri.001G035800 Populus trichocarpa HOM05D002285 ORTHO05D004192 4.5e-37 158.3 128 60.2
AUR62018932 Chenopodium quinoa HOM05D002285 ORTHO05D004192 5.9e-37 157.9 129 59.7
Potri.003G190000 Populus trichocarpa HOM05D002285 ORTHO05D004192 5.9e-37 157.9 128 60.9
Sabra01G0024900 Salix brachista HOM05D002285 ORTHO05D004192 7.7e-37 157.5 128 58.6
Thecc.10G132200 Theobroma cacao HOM05D002285 ORTHO05D004192 7.7e-37 157.5 128 62.5
PGR031G2891 Punica granatum HOM05D002285 ORTHO05D004192 1.0e-36 157.1 129 61.2
HanXRQChr07g0198621 Helianthus annuus HOM05D002285 ORTHO05D004192 1.3e-36 156.8 128 62.5
Sed0020539 Sechium edule HOM05D002285 ORTHO05D004192 1.3e-36 156.8 131 61.1
SGA_v2.0_scaffold25G10982 Striga asiatica HOM05D002285 ORTHO05D004192 1.7e-36 156.4 133 65.4
Duzib128G0133 Durio zibethinus HOM05D002285 ORTHO05D004192 2.2e-36 156.0 128 62.5
Gorai.010G212800 Gossypium raimondii HOM05D002285 ORTHO05D004192 2.2e-36 156.0 128 62.5
Actinidia01697 Actinidia chinensis HOM05D002285 ORTHO05D004192 2.9e-36 155.6 128 64.1
PSO541G2672 Papaver somniferum HOM05D002285 ORTHO05D004192 2.9e-36 155.6 128 60.9
Sabra03G0139800 Salix brachista HOM05D002285 ORTHO05D004192 2.9e-36 155.6 130 59.2
ECA246G3634 Erigeron canadensis HOM05D002285 ORTHO05D004192 3.8e-36 155.2 148 54.1
Gohir.D06G181100 Gossypium hirsutum HOM05D002285 ORTHO05D004192 3.8e-36 155.2 128 61.7
Gohir.D06G181300 Gossypium hirsutum HOM05D002285 ORTHO05D004192 3.8e-36 155.2 128 61.7
Lalb_Chr15g0090711 Lupinus albus HOM05D002285 ORTHO05D004192 3.8e-36 155.2 129 62.0
Psat0s1023g0040 Pisum sativum HOM05D002285 ORTHO05D004192 3.8e-36 155.2 129 64.3
Haze_01812 Corylus avellana HOM05D002285 ORTHO05D004192 5.0e-36 154.8 128 63.3
Gohir.A06G172300 Gossypium hirsutum HOM05D002285 ORTHO05D004192 5.0e-36 154.8 128 61.7
MELO3C019433.2 Cucumis melo HOM05D002285 ORTHO05D004192 6.5e-36 154.5 128 60.2
CsaV3_3G019250 Cucumis sativus L. HOM05D002285 ORTHO05D004192 6.5e-36 154.5 128 59.4
Gorai.010G212600 Gossypium raimondii HOM05D002285 ORTHO05D004192 6.5e-36 154.5 128 61.7
Cpa.g.sc33.153 Carica papaya HOM05D002285 ORTHO05D004192 1.1e-35 153.7 128 60.9
CiPaw.06G144200 Carya illinoinensis HOM05D002285 ORTHO05D004192 1.1e-35 153.7 128 61.7
HPP92_028185 Vanilla planifolia HOM05D002285 ORTHO05D004192 1.1e-35 153.7 130 58.5
BcaB06g25623 Brassica carinata HOM05D002285 ORTHO05D004192 1.5e-35 153.3 128 61.7
AUR62027776 Chenopodium quinoa HOM05D002285 ORTHO05D004192 1.5e-35 153.3 129 58.1
THA.LOC104816587 Tarenaya hassleriana HOM05D002285 ORTHO05D004192 1.5e-35 153.3 129 61.2
COL.COLO4_32862 Corchorus olitorius HOM05D002285 ORTHO05D004192 2.5e-35 152.5 128 62.5
Lj6g0002670 Lotus japonicus HOM05D002285 ORTHO05D004192 2.5e-35 152.5 131 62.6
Nn7g37168 Nelumbo nucifera HOM05D002285 ORTHO05D004192 3.2e-35 152.1 128 63.3
Prupe.8G189400 Prunus persica HOM05D002285 ORTHO05D004192 3.2e-35 152.1 128 59.4
A05p37890 Brassica napus HOM05D002285 ORTHO05D004192 5.5e-35 151.4 131 61.8
TWI75G0169 Tripterygium wilfordii HOM05D002285 ORTHO05D004192 5.5e-35 151.4 128 60.2
Gohir.A06G172500 Gossypium hirsutum HOM05D002285 ORTHO05D004192 7.2e-35 151.0 128 60.2
HanXRQChr02g0034471 Helianthus annuus HOM05D002285 ORTHO05D004192 7.2e-35 151.0 128 57.8
MD05G1158000 Malus domestica HOM05D002285 ORTHO05D004192 7.2e-35 151.0 128 59.4
TAR629G0600 Trochodendron aralioides HOM05D002285 ORTHO05D004192 7.2e-35 151.0 128 60.2
CiPaw.05G050700 Carya illinoinensis HOM05D002285 ORTHO05D004192 9.4e-35 150.6 128 60.9
ECA240G2921 Erigeron canadensis HOM05D002285 ORTHO05D004192 9.4e-35 150.6 129 59.7
arahy.Tifrunner.gnm1.ann1.2HCW1A Arachis hypogaea HOM05D002285 ORTHO05D004192 1.2e-34 150.2 128 65.6
BraA05t22583Z Brassica rapa HOM05D002285 ORTHO05D004192 1.2e-34 150.2 129 62.0
FAN15G0402 Fragaria x ananassa HOM05D002285 ORTHO05D004192 1.2e-34 150.2 129 61.2
CDE08G0904 Ceratophyllum demersum HOM05D002285 ORTHO05D004192 1.6e-34 149.8 129 58.1
Eucgr.G03185 Eucalyptus grandis HOM05D002285 ORTHO05D004192 1.6e-34 149.8 131 60.3
FvH4_2g17680 Fragaria vesca HOM05D002285 ORTHO05D004192 1.6e-34 149.8 129 61.2
FAN24G1949 Fragaria x ananassa HOM05D002285 ORTHO05D004192 1.6e-34 149.8 129 61.2
MD10G1150700 Malus domestica HOM05D002285 ORTHO05D004192 1.6e-34 149.8 128 58.6
RcHm_v2.0_Chr6g0282661 Rosa chinensis HOM05D002285 ORTHO05D004192 1.6e-34 149.8 129 62.0
arahy.Tifrunner.gnm1.ann1.IXY6UZ Arachis hypogaea HOM05D002285 ORTHO05D004192 2.1e-34 149.4 128 65.6
BcaC05g29373 Brassica carinata HOM05D002285 ORTHO05D004192 2.1e-34 149.4 129 62.0
C05p56680 Brassica napus HOM05D002285 ORTHO05D004192 2.1e-34 149.4 129 62.0
BolC5t34333H Brassica oleracea HOM05D002285 ORTHO05D004192 2.1e-34 149.4 129 62.0
TAR629G0471 Trochodendron aralioides HOM05D002285 ORTHO05D004192 2.1e-34 149.4 128 60.2
CANSAT01G1933 Cannabis sativa HOM05D002285 ORTHO05D004192 2.7e-34 149.1 128 60.9
CAN.G134.32 Capsicum annuum HOM05D002285 ORTHO05D004192 2.7e-34 149.1 128 60.9
Lsat_1_v5_gn_6_76300 Lactuca sativa HOM05D002285 ORTHO05D004192 2.7e-34 149.1 129 57.4
Medtr3g113680 Medicago truncatula HOM05D002285 ORTHO05D004192 4.7e-34 148.3 142 56.3
AT3G11450 Arabidopsis thaliana HOM05D002285 ORTHO05D004192 6.1e-34 147.9 132 59.1
TWI12G1303 Tripterygium wilfordii HOM05D002285 ORTHO05D004192 6.1e-34 147.9 129 59.7
Carub.0003s1077 Capsella rubella HOM05D002285 ORTHO05D004192 1.0e-33 147.1 128 59.4
Medtr7g109430 Medicago truncatula HOM05D002285 ORTHO05D004192 1.4e-33 146.7 145 55.2
Oeu004240.2 Olea europaea HOM05D002285 ORTHO05D004192 1.4e-33 146.7 128 57.8
PSO675G2493 Papaver somniferum HOM05D002285 ORTHO05D004192 1.4e-33 146.7 130 59.2
Zm00001eb085870 Zea mays HOM05D002285 ORTHO05D004192 1.4e-33 146.7 131 59.5
Thhalv10020260m.g Eutrema salsugineum HOM05D002285 ORTHO05D004192 1.8e-33 146.4 128 59.4
Sp3g09680 Schrenkiella parvula HOM05D002285 ORTHO05D004192 1.8e-33 146.4 128 59.4
CARHR086000 Cardamine hirsuta HOM05D002285 ORTHO05D004192 2.3e-33 146.0 128 59.4
PSO541G2777 Papaver somniferum HOM05D002285 ORTHO05D004192 2.3e-33 146.0 130 58.5
PGSC0003DMG400003295 Solanum tuberosum HOM05D002285 ORTHO05D004192 4.0e-33 145.2 128 60.2
DCAR_029722 Daucus carota HOM05D002285 ORTHO05D004192 5.2e-33 144.8 129 58.1
SEGI_05673 Sequoiadendron giganteum HOM05D002285 ORTHO05D004192 6.7e-33 144.4 131 55.7
Sopen01g040410 Solanum pennellii HOM05D002285 ORTHO05D004192 6.7e-33 144.4 128 58.6
CARHR206810 Cardamine hirsuta HOM05D002285 ORTHO05D004192 8.8e-33 144.1 129 58.9
Solyc01g096700.4 Solanum lycopersicum HOM05D002285 ORTHO05D004192 8.8e-33 144.1 128 58.6
THA.LOC104826826 Tarenaya hassleriana HOM05D002285 ORTHO05D004192 8.8e-33 144.1 131 58.0
Sed0011384 Sechium edule HOM05D002285 ORTHO05D004192 1.2e-32 143.7 142 54.9
Zm00001eb085940 Zea mays HOM05D002285 ORTHO05D004192 1.5e-32 143.3 133 58.6
HanXRQChr17g0536391 Helianthus annuus HOM05D002285 ORTHO05D004192 4.4e-32 141.7 137 54.7
ATR1096G014 Amborella trichopoda HOM05D002285 ORTHO05D004192 7.5e-32 141.0 131 58.8
AL3G22990 Arabidopsis lyrata HOM05D002285 ORTHO05D004192 7.5e-32 141.0 128 58.6
BcaB04g21135 Brassica carinata HOM05D002285 ORTHO05D004192 7.5e-32 141.0 130 57.7
Aa31LG3G4780 Aethionema arabicum HOM05D002285 ORTHO05D004192 1.3e-31 140.2 132 54.5
Aa31LG3G4810 Aethionema arabicum HOM05D002285 ORTHO05D004192 1.3e-31 140.2 132 54.5
AL6G16060 Arabidopsis lyrata HOM05D002285 ORTHO05D004192 4.8e-31 138.3 129 57.4
Psat7g025360 Pisum sativum HOM05D002285 ORTHO05D004192 6.3e-31 137.9 141 55.3
Sp6g36800 Schrenkiella parvula HOM05D002285 ORTHO05D004192 2.4e-30 136.0 132 53.8
PSO675G1354 Papaver somniferum HOM05D002285 ORTHO05D004192 3.1e-30 135.6 128 53.9
AT5G06110 Arabidopsis thaliana HOM05D002285 ORTHO05D004192 9.1e-30 134.0 133 54.1
Thhalv10012905m.g Eutrema salsugineum HOM05D002285 ORTHO05D004192 1.2e-29 133.7 130 52.3
Carub.0006s0498 Capsella rubella HOM05D002285 ORTHO05D004192 2.0e-29 132.9 129 54.3
A03p37070 Brassica napus HOM05D002285 ORTHO05D004192 2.9e-28 129.0 143 51.0
AagrBONN_evm.TU.Sc2ySwM_228.101 Anthoceros agrestis HOM05D002285 ORTHO05D004192 6.5e-28 127.9 130 53.1
BraA03t12869Z Brassica rapa HOM05D002285 ORTHO05D004192 6.5e-28 127.9 143 51.0
BolC3t16752H Brassica oleracea HOM05D002285 ORTHO05D004192 2.5e-27 125.9 142 51.4
SMO367G0595 Selaginella moellendorffii HOM05D002285 ORTHO05D004192 2.5e-27 125.9 130 48.5
BcaB04g18640 Brassica carinata HOM05D002285 ORTHO05D004192 7.2e-27 124.4 137 52.6
Mapoly0114s0007 Marchantia polymorpha HOM05D002285 ORTHO05D004192 1.2e-26 123.6 131 53.4
C03p44920 Brassica napus HOM05D002285 ORTHO05D004192 1.6e-26 123.2 143 51.7
SHI11339 Sapria himalayana HOM05D002285 ORTHO05D004192 1.6e-26 123.2 137 46.7
Cc07_g11350 Coffea canephora HOM05D002285 ORTHO05D004192 4.7e-26 121.7 132 52.3
Nitab4.5_0007610g0020 Nicotiana tabacum HOM05D002285 ORTHO05D004192 4.0e-25 118.6 128 50.8
CAN.G74.14 Capsicum annuum HOM05D002285 ORTHO05D004192 1.2e-24 117.1 123 52.0
Peaxi162Scf00220g00025 Petunia axillaris HOM05D002285 ORTHO05D004192 1.5e-24 116.7 128 50.0
Nitab4.5_0004168g0010 Nicotiana tabacum HOM05D002285 ORTHO05D004192 3.4e-24 115.5 128 50.8
BcaB01g05739 Brassica carinata HOM05D002285 ORTHO05D004192 9.8e-24 114.0 139 51.1
BcaB01g05745 Brassica carinata HOM05D002285 ORTHO05D004192 1.3e-23 113.6 140 46.4
C03p02870 Brassica napus HOM05D002285 ORTHO05D004192 2.4e-22 109.4 144 42.4
A03p02550 Brassica napus HOM05D002285 ORTHO05D004192 3.1e-22 109.0 144 42.4
BraA03t09616Z Brassica rapa HOM05D002285 ORTHO05D004192 3.1e-22 109.0 144 42.4
A03p02530 Brassica napus HOM05D002285 ORTHO05D004192 4.1e-22 108.6 144 42.4
BcaB01g05971 Brassica carinata HOM05D002285 ORTHO05D004192 1.2e-21 107.1 144 41.7
BolC3t12842H Brassica oleracea HOM05D002285 ORTHO05D004192 1.2e-21 107.1 144 41.7
BcaB01g05973 Brassica carinata HOM05D002285 ORTHO05D004192 4.5e-21 105.1 145 40.7
BolC3t12844H Brassica oleracea HOM05D002285 ORTHO05D004192 4.5e-21 105.1 145 40.7
C03p02880 Brassica napus HOM05D002285 ORTHO05D004192 7.7e-21 104.4 145 41.4
BraA03t09614Z Brassica rapa HOM05D002285 ORTHO05D004192 1.3e-20 103.6 143 41.3
Pp3c14_5130 Physcomitrium patens HOM05D002285 ORTHO05D004192 2.9e-20 102.4 131 47.3
Pp3c12_1320 Physcomitrium patens HOM05D002285 ORTHO05D004192 6.6e-20 101.3 134 47.0
CBR_g1010 Chara braunii HOM05D002285 ORTHO05D004192 1.5e-19 100.1 137 47.4
Pp3c17_1730 Physcomitrium patens HOM05D002285 ORTHO05D004192 6.1e-18 94.7 131 47.3
CSS0018531 Camellia sinensis var. sinensis HOM05D002285 ORTHO05D004192 8.9e-17 90.9 60 75.0
HanXRQChr03g0083651 Helianthus annuus HOM05D002285 ORTHO05D004192 2.4e-14 82.8 81 50.6
Atru.chr8.2275 Acer truncatum HOM05D002285 ORTHO05D004192 1.7e-12 76.6 55 61.8
BcaC01g04120 Brassica carinata HOM05D002285 ORTHO05D004192 2.3e-09 66.2 82 46.3
CDE02G4687 Ceratophyllum demersum HOM05D002285 ORTHO05D004192 2.3e-09 66.2 136 30.9
Nn5g30795 Nelumbo nucifera HOM05D002285 ORTHO05D004192 5.2e-09 65.1 51 54.9
BcaC01g04119 Brassica carinata HOM05D002285 ORTHO05D004192 6.4e-07 58.2 61 49.2
Oeu037828.3 Olea europaea HOM05D002285 ORTHO05D004192 4.1e-06 55.5 51 56.9


User provided reference genes

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