Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3020 Utricularia gibba HOM05D004923 ORTHO05D005940 0.0e+00 1146.7 631 100.0
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 8.3e-88 328.9 637 36.3
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 1.9e-68 264.6 633 32.2
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 1.5e-60 238.4 635 31.5
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 2.2e-56 224.6 630 32.7
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 8.1e-51 206.1 668 27.1
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 6.0e-46 189.9 625 29.1
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 1.7e-45 188.3 603 26.9
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 4.0e-42 177.2 618 29.0
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 9.3e-39 166.0 645 26.7
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 6.7e-37 159.8 624 26.0
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 8.1e-35 152.9 601 25.6
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 9.0e-34 149.4 640 27.0
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 4.5e-33 147.1 659 25.3
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 5.8e-33 146.7 597 26.8
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 3.2e-31 141.0 644 25.6
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 4.2e-31 140.6 603 24.9
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 2.7e-30 137.9 647 24.9
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 5.1e-29 133.7 310 33.2
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 9.6e-28 129.4 639 25.2
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 1.6e-27 128.6 654 24.2
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 1.4e-23 115.5 743 22.9
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 1.3e-21 109.0 630 22.7
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 6.7e-21 106.7 620 23.5
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 2.5e-20 104.8 637 23.7
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 1.3e-19 102.4 636 23.4
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 4.8e-19 100.5 631 24.6
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 1.8e-18 98.6 634 23.5
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 3.1e-18 97.8 593 22.6
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.5e-17 95.5 655 21.4
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 4.5e-17 94.0 591 23.7
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 4.5e-17 94.0 280 26.8
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 1.0e-16 92.8 438 24.7
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.7e-16 92.0 647 22.7
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 1.7e-16 92.0 638 23.0
Ah.04g159880 Amaranthus hybridus HOM05D004923 ORTHO05D005940 1.4e-15 89.0 625 21.3
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 4.2e-15 87.4 641 23.4
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 9.4e-15 86.3 606 22.4
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 4.6e-14 84.0 637 21.5
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 7.9e-14 83.2 635 21.3
Lsat_1_v5_gn_5_38100 Lactuca sativa HOM05D004923 ORTHO05D005940 1.4e-13 82.4 459 22.2
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 3.0e-13 81.3 634 21.9
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 5.1e-13 80.5 600 22.3
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 2.0e-12 78.6 637 21.8
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 3.3e-12 77.8 313 27.8
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 4.3e-12 77.4 596 21.8
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 4.3e-12 77.4 637 22.3
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 7.4e-12 76.6 596 20.6
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 7.4e-12 76.6 673 20.5
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 9.7e-12 76.3 245 25.7
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 1.3e-11 75.9 642 22.7
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 1.3e-11 75.9 761 21.0
Peaxi162Scf00413g00516 Petunia axillaris HOM05D004923 ORTHO05D005940 2.2e-11 75.1 277 25.6
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 2.8e-11 74.7 623 19.6
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 2.8e-11 74.7 623 19.6
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 2.8e-11 74.7 605 22.1
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 3.7e-11 74.3 595 21.5
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 4.8e-11 73.9 638 22.4
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 1.1e-10 72.8 340 23.5
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 1.1e-10 72.8 265 25.3
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 1.1e-10 72.8 382 24.6
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 1.8e-10 72.0 135 34.1
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 1.8e-10 72.0 590 22.2
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 2.4e-10 71.6 629 21.3
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 2.4e-10 71.6 629 21.3
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 2.4e-10 71.6 127 34.6
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 5.3e-10 70.5 602 21.4
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 9.1e-10 69.7 645 20.6
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 1.5e-09 68.9 223 27.8
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 4.5e-09 67.4 250 25.2
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.3e-08 65.9 675 19.9
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 2.9e-08 64.7 714 21.6
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 5.0e-08 63.9 240 25.4
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 8.5e-08 63.2 636 20.8
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 1.1e-07 62.8 602 20.9
Ah.04g159900 Amaranthus hybridus HOM05D004923 ORTHO05D005940 1.4e-07 62.4 289 23.2
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 1.4e-07 62.4 672 20.2
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 1.9e-07 62.0 204 21.6
Atru.chr5.1952 Acer truncatum HOM05D000107 ORTHO05D000062 2.5e-07 61.6 246 26.8
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 2.5e-07 61.6 645 21.9
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 5.5e-07 60.5 382 23.0
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 5.5e-07 60.5 382 23.0
THA.LOC104821702 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 5.5e-07 60.5 601 21.0
unitig_22.g6242 Utricularia gibba HOM05D004923 ORTHO05D005940 7.2e-07 60.1 171 32.7
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 3.6e-06 57.8 598 22.6
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 4.7e-06 57.4 627 20.4
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 6.1e-06 57.0 326 21.2


User provided reference genes

Program Settings