Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3003 Utricularia gibba HOM05D003714 ORTHO05D004379 4.7e-29 130.6 68 100.0
unitig_8.g3299 Utricularia gibba HOM05D003714 ORTHO05D004379 9.1e-09 63.2 45 68.9
MD03G1120400 Malus domestica HOM05D003714 ORTHO05D004379 1.2e-08 62.8 55 61.8
Prupe.6G103800 Prunus persica HOM05D003714 ORTHO05D004379 1.6e-08 62.4 51 62.7
Manes.11G147100 Manihot esculenta HOM05D003714 ORTHO05D004379 3.5e-08 61.2 51 58.8
Ciclev10030090m.g Citrus clementina HOM05D003714 ORTHO05D004379 5.9e-08 60.5 45 66.7
Manes.04G019400 Manihot esculenta HOM05D003714 ORTHO05D004379 5.9e-08 60.5 55 58.2
Sp6g22270 Schrenkiella parvula HOM05D003714 ORTHO05D004379 5.9e-08 60.5 45 66.7
Aa31LG1G12660 Aethionema arabicum HOM05D003714 ORTHO05D004379 7.7e-08 60.1 51 56.9
Hma1.2p1_0307F.1_g119810 Hydrangea macrophylla HOM05D003714 ORTHO05D004379 7.7e-08 60.1 50 60.0
Sc15g0001490 Simmondsia chinensis HOM05D003714 ORTHO05D004379 7.7e-08 60.1 51 56.9
MD11G1138800 Malus domestica HOM05D003714 ORTHO05D004379 1.0e-07 59.7 55 60.0
Potri.004G212000 Populus trichocarpa HOM05D003714 ORTHO05D004379 1.0e-07 59.7 55 58.2
Sabra04G0143400 Salix brachista HOM05D003714 ORTHO05D004379 1.0e-07 59.7 55 58.2
unitig_27.g25054 Utricularia gibba HOM05D003714 ORTHO05D004379 1.0e-07 59.7 45 66.7
AUR62042199 Chenopodium quinoa HOM05D003714 ORTHO05D004379 1.3e-07 59.3 51 54.9
QL01p021761 Quercus lobata HOM05D003714 ORTHO05D004379 1.3e-07 59.3 55 58.2
THA.LOC104810862 Tarenaya hassleriana HOM05D003714 ORTHO05D004379 1.3e-07 59.3 51 58.8
VMungo1127G1929 Vigna mungo HOM05D003714 ORTHO05D004379 1.3e-07 59.3 45 64.4
AL8G37290 Arabidopsis lyrata HOM05D003714 ORTHO05D004379 1.7e-07 58.9 45 64.4
AT5G60700 Arabidopsis thaliana HOM05D003714 ORTHO05D004379 1.7e-07 58.9 45 64.4
BcaC03g13945 Brassica carinata HOM05D003714 ORTHO05D004379 1.7e-07 58.9 45 64.4
BcaC04g19732 Brassica carinata HOM05D003714 ORTHO05D004379 1.7e-07 58.9 45 64.4
C09p53430 Brassica napus HOM05D003714 ORTHO05D004379 1.7e-07 58.9 45 64.4
Nn2g10822 Nelumbo nucifera HOM05D003714 ORTHO05D004379 1.7e-07 58.9 51 56.9
CARHR274380 Cardamine hirsuta HOM05D003714 ORTHO05D004379 2.3e-07 58.5 45 64.4
CiPaw.13G115700 Carya illinoinensis HOM05D003714 ORTHO05D004379 2.3e-07 58.5 45 64.4
Gohir.D03G136000 Gossypium hirsutum HOM05D003714 ORTHO05D004379 2.3e-07 58.5 55 56.4
Phvul.011G080500 Phaseolus vulgaris HOM05D003714 ORTHO05D004379 2.3e-07 58.5 45 64.4
BcaB05g22662 Brassica carinata HOM05D003714 ORTHO05D004379 2.9e-07 58.2 45 64.4
BcaB08g36372 Brassica carinata HOM05D003714 ORTHO05D004379 2.9e-07 58.2 45 64.4
A10p17940 Brassica napus HOM05D003714 ORTHO05D004379 2.9e-07 58.2 45 64.4
BNapus_Darmor_BZH_scaffold_38p00110 Brassica napus HOM05D003714 ORTHO05D004379 2.9e-07 58.2 45 64.4
C02p11520 Brassica napus HOM05D003714 ORTHO05D004379 2.9e-07 58.2 45 64.4
BolC2t07227H Brassica oleracea HOM05D003714 ORTHO05D004379 2.9e-07 58.2 45 64.4
BolC9t58217H Brassica oleracea HOM05D003714 ORTHO05D004379 2.9e-07 58.2 45 64.4
BraA02t05710Z Brassica rapa HOM05D003714 ORTHO05D004379 2.9e-07 58.2 45 64.4
BraA10t43869Z Brassica rapa HOM05D003714 ORTHO05D004379 2.9e-07 58.2 45 64.4
Haze_23797 Corylus avellana HOM05D003714 ORTHO05D004379 2.9e-07 58.2 55 56.4
Haze_23798 Corylus avellana HOM05D003714 ORTHO05D004379 2.9e-07 58.2 55 56.4
Gohir.A08G199100 Gossypium hirsutum HOM05D003714 ORTHO05D004379 2.9e-07 58.2 55 58.2
Gohir.D08G216500 Gossypium hirsutum HOM05D003714 ORTHO05D004379 2.9e-07 58.2 55 58.2
Gorai.004G230400 Gossypium raimondii HOM05D003714 ORTHO05D004379 2.9e-07 58.2 55 58.2
Lj2C1024T6 Lonicera japonica HOM05D003714 ORTHO05D004379 2.9e-07 58.2 45 62.2
Lalb_Chr03g0027461 Lupinus albus HOM05D003714 ORTHO05D004379 2.9e-07 58.2 45 62.2
RcHm_v2.0_Chr5g0058661 Rosa chinensis HOM05D003714 ORTHO05D004379 2.9e-07 58.2 55 56.4
Sed0011730 Sechium edule HOM05D003714 ORTHO05D004379 2.9e-07 58.2 55 56.4
Duzib150G0819 Durio zibethinus HOM05D003714 ORTHO05D004379 3.8e-07 57.8 55 56.4
Dinv32729 Davidia involucrata HOM05D003714 ORTHO05D004379 5.0e-07 57.4 45 62.2
Duzib168G1405 Durio zibethinus HOM05D003714 ORTHO05D004379 5.0e-07 57.4 55 56.4
Lalb_Chr01g0004371 Lupinus albus HOM05D003714 ORTHO05D004379 5.0e-07 57.4 45 62.2
Thecc.09G342900 Theobroma cacao HOM05D003714 ORTHO05D004379 5.0e-07 57.4 45 64.4
arahy.Tifrunner.gnm1.ann1.8QPZ90 Arachis hypogaea HOM05D003714 ORTHO05D004379 6.6e-07 57.0 51 54.9
Carub.0008s2138 Capsella rubella HOM05D003714 ORTHO05D004379 6.6e-07 57.0 45 62.2
CAN.G1966.3 Capsicum annuum HOM05D003714 ORTHO05D004379 6.6e-07 57.0 51 54.9
AUR62022789 Chenopodium quinoa HOM05D003714 ORTHO05D004379 6.6e-07 57.0 51 54.9
ClCG01G013560 Citrullus lanatus HOM05D003714 ORTHO05D004379 6.6e-07 57.0 55 56.4
MELO3C004898.2 Cucumis melo HOM05D003714 ORTHO05D004379 6.6e-07 57.0 55 54.5
Migut.D02239 Erythranthe guttata HOM05D003714 ORTHO05D004379 6.6e-07 57.0 50 58.0
Migut.O00751 Erythranthe guttata HOM05D003714 ORTHO05D004379 6.6e-07 57.0 50 58.0
Medtr4g058760 Medicago truncatula HOM05D003714 ORTHO05D004379 6.6e-07 57.0 45 62.2
Solyc06g075100.3 Solanum lycopersicum HOM05D003714 ORTHO05D004379 6.6e-07 57.0 45 60.0
TPR.G6161 Trifolium pratense HOM05D003714 ORTHO05D004379 6.6e-07 57.0 45 62.2
Actinidia03720 Actinidia chinensis HOM05D003714 ORTHO05D004379 8.6e-07 56.6 51 54.9
Aqoxy1G01219 Aquilegia oxysepala HOM05D003714 ORTHO05D004379 8.6e-07 56.6 45 60.0
arahy.Tifrunner.gnm1.ann1.BKDH6Z Arachis hypogaea HOM05D003714 ORTHO05D004379 8.6e-07 56.6 45 62.2
CsaV3_1G013950 Cucumis sativus L. HOM05D003714 ORTHO05D004379 8.6e-07 56.6 55 54.5
FAN11G3344 Fragaria x ananassa HOM05D003714 ORTHO05D004379 8.6e-07 56.6 45 62.2
Gorai.003G143100 Gossypium raimondii HOM05D003714 ORTHO05D004379 8.6e-07 56.6 55 54.5
Peaxi162Scf00270g00113 Petunia axillaris HOM05D003714 ORTHO05D004379 8.6e-07 56.6 45 60.0
Sopen06g031520 Solanum pennellii HOM05D003714 ORTHO05D004379 8.6e-07 56.6 45 57.8
Thhalv10012601m.g Eutrema salsugineum HOM05D003714 ORTHO05D004379 1.1e-06 56.2 45 62.2
FAN16G2552 Fragaria x ananassa HOM05D003714 ORTHO05D004379 1.1e-06 56.2 45 62.2
FAN25G0709 Fragaria x ananassa HOM05D003714 ORTHO05D004379 1.1e-06 56.2 45 62.2
Oeu001285.1 Olea europaea HOM05D003714 ORTHO05D004379 1.1e-06 56.2 55 56.4
COL.COLO4_18316 Corchorus olitorius HOM05D003714 ORTHO05D004379 1.5e-06 55.8 55 54.5
PGR102G2693 Punica granatum HOM05D003714 ORTHO05D004379 1.5e-06 55.8 51 52.9
GSVIVG01025204001 Vitis vinifera HOM05D003714 ORTHO05D004379 1.5e-06 55.8 51 52.9
Actinidia07147 Actinidia chinensis HOM05D003714 ORTHO05D004379 1.9e-06 55.5 55 54.5
MSTRG.18670 Avicennia marina HOM05D003714 ORTHO05D004379 1.9e-06 55.5 50 56.0
Cc01_g10960 Coffea canephora HOM05D003714 ORTHO05D004379 1.9e-06 55.5 51 52.9
Gohir.A03G032400 Gossypium hirsutum HOM05D003714 ORTHO05D004379 1.9e-06 55.5 55 52.7
Lj3g0001899 Lotus japonicus HOM05D003714 ORTHO05D004379 1.9e-06 55.5 45 60.0
Potri.009G010900 Populus trichocarpa HOM05D003714 ORTHO05D004379 1.9e-06 55.5 55 52.7
TWI79G0067 Tripterygium wilfordii HOM05D003714 ORTHO05D004379 1.9e-06 55.5 45 60.0
Actinidia24111 Actinidia chinensis HOM05D003714 ORTHO05D004379 2.5e-06 55.1 55 54.5
Lj3g0004216 Lotus japonicus HOM05D003714 ORTHO05D004379 2.5e-06 55.1 45 57.8
Psat7g144800 Pisum sativum HOM05D003714 ORTHO05D004379 2.5e-06 55.1 45 60.0
DCAR_017883 Daucus carota HOM05D003714 ORTHO05D004379 3.3e-06 54.7 45 57.8
DCAR_022764 Daucus carota HOM05D003714 ORTHO05D004379 3.3e-06 54.7 45 60.0
Gohir.D05G104100 Gossypium hirsutum HOM05D003714 ORTHO05D004379 3.3e-06 54.7 45 57.8
Gorai.009G108300 Gossypium raimondii HOM05D003714 ORTHO05D004379 3.3e-06 54.7 45 57.8
HanXRQChr14g0452661 Helianthus annuus HOM05D003714 ORTHO05D004379 3.3e-06 54.7 45 57.8
Nitab4.5_0000106g0250 Nicotiana tabacum HOM05D003714 ORTHO05D004379 3.3e-06 54.7 51 51.0
PSO063G6987 Papaver somniferum HOM05D003714 ORTHO05D004379 3.3e-06 54.7 45 57.8
PSO339G1676 Papaver somniferum HOM05D003714 ORTHO05D004379 3.3e-06 54.7 45 57.8
Sabra09G0006800 Salix brachista HOM05D003714 ORTHO05D004379 3.3e-06 54.7 55 50.9
TAR633G1536 Trochodendron aralioides HOM05D003714 ORTHO05D004379 3.3e-06 54.7 51 52.9
CSS0039471 Camellia sinensis var. sinensis HOM05D003714 ORTHO05D004379 4.2e-06 54.3 45 57.8
CSS0046644 Camellia sinensis var. sinensis HOM05D003714 ORTHO05D004379 4.2e-06 54.3 45 57.8
CANSAT54G2133 Cannabis sativa HOM05D003714 ORTHO05D004379 4.2e-06 54.3 45 57.8
FvH4_3g31890 Fragaria vesca HOM05D003714 ORTHO05D004379 4.2e-06 54.3 45 60.0
FAN21G0199 Fragaria x ananassa HOM05D003714 ORTHO05D004379 5.5e-06 53.9 45 60.0
Solyc11g069560.2 Solanum lycopersicum HOM05D003714 ORTHO05D004379 5.5e-06 53.9 45 57.8
Sopen11g028270 Solanum pennellii HOM05D003714 ORTHO05D004379 5.5e-06 53.9 45 57.8
PGSC0003DMG400008087 Solanum tuberosum HOM05D003714 ORTHO05D004379 5.5e-06 53.9 45 57.8
Lj1A202T36 Lonicera japonica HOM05D003714 ORTHO05D004379 7.2e-06 53.5 55 52.7
SalBow3G2648 Salvia bowleyana HOM05D003714 ORTHO05D004379 7.2e-06 53.5 56 53.6
Atru.chr3.3608 Acer truncatum HOM05D003714 ORTHO05D004379 9.5e-06 53.1 55 52.7
EL10Ac9g22541 Beta vulgaris HOM05D003714 ORTHO05D004379 9.5e-06 53.1 51 49.0
CAN.G631.39 Capsicum annuum HOM05D003714 ORTHO05D004379 9.5e-06 53.1 45 57.8
CDE07G1448 Ceratophyllum demersum HOM05D003714 ORTHO05D004379 9.5e-06 53.1 51 49.0
MBI07_g42224_MAGBIO Magnolia biondii HOM05D003714 ORTHO05D004379 9.5e-06 53.1 51 49.0
Peaxi162Scf00029g01511 Petunia axillaris HOM05D003714 ORTHO05D004379 9.5e-06 53.1 51 49.0
TWI75G0420 Tripterygium wilfordii HOM05D003714 ORTHO05D004379 9.5e-06 53.1 51 52.9


User provided reference genes

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