Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g2995 Utricularia gibba HOM05D003890 ORTHO05D004514 5.0e-173 610.9 291 100.0
unitig_22.g6202 Utricularia gibba HOM05D003890 ORTHO05D004514 1.4e-85 320.5 226 71.2
SGA_v2.0_scaffold8G04590 Striga asiatica HOM05D003890 ORTHO05D004514 4.5e-65 252.3 235 58.7
SGA_v2.0_scaffold3G01504 Striga asiatica HOM05D003890 ORTHO05D004514 3.1e-61 239.6 202 58.4
Migut.D00602 Erythranthe guttata HOM05D003890 ORTHO05D004514 2.6e-60 236.5 235 55.3
MSTRG.21378 Avicennia marina HOM05D003890 ORTHO05D004514 5.8e-60 235.3 216 57.4
Dinv36258 Davidia involucrata HOM05D003890 ORTHO05D004514 9.2e-58 228.0 235 52.8
QL01p004686 Quercus lobata HOM05D003890 ORTHO05D004514 1.6e-57 227.3 227 54.2
ClCG03G013240 Citrullus lanatus HOM05D003890 ORTHO05D004514 6.0e-57 225.3 228 53.5
Manes.14G002800 Manihot esculenta HOM05D003890 ORTHO05D004514 7.8e-57 224.9 241 51.9
MSTRG.18426 Avicennia marina HOM05D003890 ORTHO05D004514 1.3e-56 224.2 228 53.9
CiPaw.13G160900 Carya illinoinensis HOM05D003890 ORTHO05D004514 1.3e-56 224.2 227 53.3
Potri.001G258100 Populus trichocarpa HOM05D003890 ORTHO05D004514 1.7e-56 223.8 227 52.9
TAR636G2753 Trochodendron aralioides HOM05D003890 ORTHO05D004514 1.7e-56 223.8 225 54.7
DCAR_002072 Daucus carota HOM05D003890 ORTHO05D004514 2.3e-56 223.4 211 54.0
Migut.N02317 Erythranthe guttata HOM05D003890 ORTHO05D004514 3.0e-56 223.0 205 57.1
Haze_23135 Corylus avellana HOM05D000807 ORTHO05D000662 6.6e-56 221.9 243 50.6
Potri.009G053300 Populus trichocarpa HOM05D003890 ORTHO05D004514 8.6e-56 221.5 227 52.4
CsaV3_1G042820 Cucumis sativus L. HOM05D003890 ORTHO05D004514 1.1e-55 221.1 240 49.6
Aqoxy2G00137 Aquilegia oxysepala HOM05D003890 ORTHO05D004514 1.9e-55 220.3 229 52.8
CiPaw.14G119100 Carya illinoinensis HOM05D003890 ORTHO05D004514 1.9e-55 220.3 227 52.0
Manes.06G164200 Manihot esculenta HOM05D003890 ORTHO05D004514 1.9e-55 220.3 228 52.6
Sabra16G0157800 Salix brachista HOM05D003890 ORTHO05D004514 2.5e-55 219.9 227 51.1
TAR633G1481 Trochodendron aralioides HOM05D003890 ORTHO05D004514 4.3e-55 219.2 241 50.6
Actinidia06907 Actinidia chinensis HOM05D003890 ORTHO05D004514 5.6e-55 218.8 217 54.4
Sabra09G0038800 Salix brachista HOM05D003890 ORTHO05D004514 5.6e-55 218.8 235 51.1
Hma1.2p1_0027F.1_g017050 Hydrangea macrophylla HOM05D003890 ORTHO05D004514 9.5e-55 218.0 222 52.3
Oeu001480.1 Olea europaea HOM05D003890 ORTHO05D004514 1.2e-54 217.6 211 55.9
Oeu016684.1 Olea europaea HOM05D003890 ORTHO05D004514 1.2e-54 217.6 212 55.7
Cfa009770 Carpinus fangiana HOM05D003890 ORTHO05D004514 1.6e-54 217.2 243 49.8
FAN16G3317 Fragaria x ananassa HOM05D003890 ORTHO05D004514 1.6e-54 217.2 222 50.5
Prupe.4G249500 Prunus persica HOM05D003890 ORTHO05D004514 3.6e-54 216.1 227 50.7
Actinidia16334 Actinidia chinensis HOM05D003890 ORTHO05D004514 4.7e-54 215.7 219 53.4
FvH4_3g28850 Fragaria vesca HOM05D003890 ORTHO05D004514 6.2e-54 215.3 222 50.0
Ciclev10016574m.g Citrus clementina HOM05D003890 ORTHO05D004514 1.1e-53 214.5 242 49.2
FAN21G3604 Fragaria x ananassa HOM05D003890 ORTHO05D004514 1.1e-53 214.5 222 51.4
MD11G1193100 Malus domestica HOM05D003890 ORTHO05D004514 1.1e-53 214.5 244 48.0
RcHm_v2.0_Chr5g0052051 Rosa chinensis HOM05D003890 ORTHO05D004514 1.4e-53 214.2 219 50.7
MBI02_g05665_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 2.3e-53 213.4 242 47.5
TWI60G0796 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 2.3e-53 213.4 209 54.1
MELO3C014593.2 Cucumis melo HOM05D003890 ORTHO05D004514 3.1e-53 213.0 233 50.2
FAN25G3809 Fragaria x ananassa HOM05D003890 ORTHO05D004514 3.1e-53 213.0 222 49.5
FAN11G0759 Fragaria x ananassa HOM05D003890 ORTHO05D004514 4.0e-53 212.6 222 49.5
Rhsim01G0191800 Rhododendron simsii HOM05D003890 ORTHO05D004514 4.0e-53 212.6 210 52.4
Sopen11g025500 Solanum pennellii HOM05D003890 ORTHO05D004514 4.0e-53 212.6 225 51.1
Cpa.g.sc84.53 Carica papaya HOM05D003890 ORTHO05D004514 5.2e-53 212.2 234 50.0
Solyc11g065740.2 Solanum lycopersicum HOM05D003890 ORTHO05D004514 5.2e-53 212.2 224 51.3
Sed0019717 Sechium edule HOM05D003890 ORTHO05D004514 8.9e-53 211.5 239 48.1
MD03G1175000 Malus domestica HOM05D003890 ORTHO05D004514 1.2e-52 211.1 243 47.3
Psat5g163000 Pisum sativum HOM05D003890 ORTHO05D004514 1.2e-52 211.1 237 49.4
Atru.chr3.2715 Acer truncatum HOM05D003890 ORTHO05D004514 2.0e-52 210.3 235 50.2
CsaV3_4G024270 Cucumis sativus L. HOM05D003890 ORTHO05D004514 2.0e-52 210.3 235 51.1
Nitab4.5_0001587g0060 Nicotiana tabacum HOM05D003890 ORTHO05D004514 2.6e-52 209.9 223 51.6
PSO384G2797 Papaver somniferum HOM05D003890 ORTHO05D004514 2.6e-52 209.9 240 49.6
PGSC0003DMG400007341 Solanum tuberosum HOM05D003890 ORTHO05D004514 4.4e-52 209.1 225 49.8
TWI32G0323 Tripterygium wilfordii HOM05D003890 ORTHO05D004514 4.4e-52 209.1 212 53.3
Cc10_g03220 Coffea canephora HOM05D003890 ORTHO05D004514 5.8e-52 208.8 232 51.3
Nitab4.5_0002741g0130 Nicotiana tabacum HOM05D003890 ORTHO05D004514 7.5e-52 208.4 223 51.1
Glyma.14G009900 Glycine max HOM05D003890 ORTHO05D004514 9.8e-52 208.0 210 53.8
Nn2g15369 Nelumbo nucifera HOM05D003890 ORTHO05D004514 9.8e-52 208.0 241 50.6
ClCG02G023230 Citrullus lanatus HOM05D003890 ORTHO05D004514 1.7e-51 207.2 229 48.5
Lalb_Chr18g0050551 Lupinus albus HOM05D003890 ORTHO05D004514 1.7e-51 207.2 227 49.8
Glyma.18G070500 Glycine max HOM05D003890 ORTHO05D004514 3.7e-51 206.1 236 50.0
Thecc.09G233900 Theobroma cacao HOM05D003890 ORTHO05D004514 4.9e-51 205.7 229 48.0
Lj1A330T24 Lonicera japonica HOM05D003890 ORTHO05D004514 6.4e-51 205.3 214 52.8
Phvul.008G283400 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 6.4e-51 205.3 222 50.5
Ca_14881_v3 Cicer arietinum L. HOM05D003890 ORTHO05D004514 8.3e-51 204.9 236 49.6
THA.LOC104811066 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 8.3e-51 204.9 233 47.6
Eucgr.J00766 Eucalyptus grandis HOM05D003890 ORTHO05D004514 1.1e-50 204.5 220 49.5
Lsat_1_v5_gn_1_66000 Lactuca sativa HOM05D003890 ORTHO05D004514 1.4e-50 204.1 226 50.0
Phvul.006G062600 Phaseolus vulgaris HOM05D003890 ORTHO05D004514 1.4e-50 204.1 237 48.9
Glyma.08G335500 Glycine max HOM05D003890 ORTHO05D004514 1.9e-50 203.8 241 48.5
GSVIVG01025257001 Vitis vinifera HOM05D003890 ORTHO05D004514 3.2e-50 203.0 161 63.4
arahy.Tifrunner.gnm1.ann1.5L0PCQ Arachis hypogaea HOM05D003890 ORTHO05D004514 4.1e-50 202.6 227 48.9
COL.COLO4_07583 Corchorus olitorius HOM05D003890 ORTHO05D004514 4.1e-50 202.6 244 46.7
Lsat_1_v5_gn_6_47921 Lactuca sativa HOM05D003890 ORTHO05D004514 5.4e-50 202.2 218 49.1
VMungo0540G2384 Vigna mungo HOM05D003890 ORTHO05D004514 5.4e-50 202.2 237 48.1
ECA240G2592 Erigeron canadensis HOM05D003890 ORTHO05D004514 7.1e-50 201.8 225 48.4
THA.LOC104807531 Tarenaya hassleriana HOM05D003890 ORTHO05D004514 7.1e-50 201.8 231 47.6
Duzib150G1364 Durio zibethinus HOM05D003890 ORTHO05D004514 9.2e-50 201.4 242 47.9
Duzib170G0856 Durio zibethinus HOM05D003890 ORTHO05D004514 9.2e-50 201.4 231 47.6
Gohir.D05G072300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 9.2e-50 201.4 241 46.9
Gorai.009G073300 Gossypium raimondii HOM05D003890 ORTHO05D004514 9.2e-50 201.4 241 46.9
Gohir.A05G069400 Gossypium hirsutum HOM05D003890 ORTHO05D004514 1.2e-49 201.1 241 46.5
PGR102G1724 Punica granatum HOM05D003890 ORTHO05D004514 1.2e-49 201.1 249 45.8
CANSAT56G1539 Cannabis sativa HOM05D003890 ORTHO05D004514 1.6e-49 200.7 244 48.0
AUR62019304 Chenopodium quinoa HOM05D003890 ORTHO05D004514 3.5e-49 199.5 233 48.5
ECA233G4357 Erigeron canadensis HOM05D003890 ORTHO05D004514 4.6e-49 199.1 228 48.2
EL10Ac4g10247 Beta vulgaris HOM05D003890 ORTHO05D004514 6.0e-49 198.7 235 48.9
Medtr3g061630 Medicago truncatula HOM05D003890 ORTHO05D004514 7.8e-49 198.4 242 47.1
Hund22030 Selenicereus undatus HOM05D003890 ORTHO05D004514 7.8e-49 198.4 221 48.9
Sed0005000 Sechium edule HOM05D003890 ORTHO05D004514 1.0e-48 198.0 198 52.5
HanXRQChr02g0056201 Helianthus annuus HOM05D003890 ORTHO05D004514 1.3e-48 197.6 225 49.3
ATR0332G008 Amborella trichopoda HOM05D003890 ORTHO05D004514 1.7e-48 197.2 195 53.3
GSVIVG01032095001 Vitis vinifera HOM05D003890 ORTHO05D004514 1.7e-48 197.2 160 60.0
CAN.G599.2 Capsicum annuum HOM05D003890 ORTHO05D004514 1.5e-47 194.1 211 49.8
Hund07506 Selenicereus undatus HOM05D003890 ORTHO05D004514 1.5e-47 194.1 236 46.6
MBI04_g36752_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 2.5e-47 193.4 225 48.0
VMungo0647G1030 Vigna mungo HOM05D003890 ORTHO05D004514 2.5e-47 193.4 211 47.4
Lalb_Chr04g0247401 Lupinus albus HOM05D003890 ORTHO05D004514 4.3e-47 192.6 205 50.2
Lalb_Chr04g0247641 Lupinus albus HOM05D003890 ORTHO05D004514 4.3e-47 192.6 205 50.2
TPR.G30124 Trifolium pratense HOM05D003890 ORTHO05D004514 7.3e-47 191.8 226 47.3
vmacro12718 Vaccinium macrocarpon HOM05D003890 ORTHO05D004514 1.2e-46 191.0 226 50.9
Gohir.D09G111000 Gossypium hirsutum HOM05D003890 ORTHO05D004514 1.6e-46 190.7 219 48.9
Ah.04g161930 Amaranthus hybridus HOM05D003890 ORTHO05D004514 2.1e-46 190.3 235 46.4
Gorai.006G128600 Gossypium raimondii HOM05D003890 ORTHO05D004514 2.1e-46 190.3 219 48.9
Peaxi162Scf00004g02340 Petunia axillaris HOM05D003890 ORTHO05D004514 3.6e-46 189.5 217 50.7
PGR119G1229 Punica granatum HOM05D003890 ORTHO05D004514 3.6e-46 189.5 184 52.2
CARHR193020 Cardamine hirsuta HOM05D003890 ORTHO05D004514 4.7e-46 189.1 205 49.3
Cc02_g28010 Coffea canephora HOM05D003890 ORTHO05D004514 4.7e-46 189.1 237 45.1
AT5G19855 Arabidopsis thaliana HOM05D003890 ORTHO05D004514 8.1e-46 188.3 218 46.8
Dinv09354 Davidia involucrata HOM05D003890 ORTHO05D004514 1.1e-45 188.0 226 45.1
A02p05850 Brassica napus HOM05D003890 ORTHO05D004514 1.4e-45 187.6 195 50.8
Gohir.A09G114300 Gossypium hirsutum HOM05D003890 ORTHO05D004514 1.8e-45 187.2 219 47.5
Lj6g0021955 Lotus japonicus HOM05D003890 ORTHO05D004514 1.8e-45 187.2 236 44.5
AL6G31380 Arabidopsis lyrata HOM05D003890 ORTHO05D004514 2.3e-45 186.8 225 47.6
A03p09680 Brassica napus HOM05D003890 ORTHO05D004514 3.1e-45 186.4 210 48.6
Carub.0006s1821 Capsella rubella HOM05D003890 ORTHO05D004514 3.1e-45 186.4 216 48.6
Zm00001eb212460 Zea mays HOM05D003890 ORTHO05D004514 3.1e-45 186.4 157 58.0
BcaB01g04825 Brassica carinata HOM05D003890 ORTHO05D004514 6.8e-45 185.3 210 48.6
BolC3t13596H Brassica oleracea HOM05D003890 ORTHO05D004514 6.8e-45 185.3 210 48.6
C03p11250 Brassica napus HOM05D003890 ORTHO05D004514 8.9e-45 184.9 210 48.6
Aa31LG4G8640 Aethionema arabicum HOM05D003890 ORTHO05D004514 1.5e-44 184.1 160 56.9
BcaB08g36566 Brassica carinata HOM05D003890 ORTHO05D004514 3.4e-44 183.0 212 49.1
BcaC03g13717 Brassica carinata HOM05D003890 ORTHO05D004514 3.4e-44 183.0 196 51.0
BNapus_Darmor_BZH_scaffold_38p02060 Brassica napus HOM05D003890 ORTHO05D004514 1.7e-43 180.6 191 50.3
Os07g0569600 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 2.9e-43 179.9 222 45.9
CDE02G1666 Ceratophyllum demersum HOM05D003890 ORTHO05D004514 6.4e-43 178.7 159 52.8
BcaB01g04844 Brassica carinata HOM05D003890 ORTHO05D004514 8.3e-43 178.3 155 57.4
BraA03t10284Z Brassica rapa HOM05D003890 ORTHO05D004514 1.4e-42 177.6 224 45.5
Os03g0807900 Oryza sativa ssp. japonica HOM05D003890 ORTHO05D004514 2.4e-42 176.8 158 55.7
BolC2t06986H Brassica oleracea HOM05D003890 ORTHO05D004514 1.2e-41 174.5 207 48.3
BraA02t05537Z Brassica rapa HOM05D003890 ORTHO05D004514 1.6e-41 174.1 206 47.1
SalBow6G5214 Salvia bowleyana HOM05D003890 ORTHO05D004514 4.6e-41 172.6 190 46.3
arahy.Tifrunner.gnm1.ann1.HEYT23 Arachis hypogaea HOM05D003890 ORTHO05D004514 1.7e-40 170.6 230 45.2
SalBow6G3376 Salvia bowleyana HOM05D003890 ORTHO05D004514 1.7e-40 170.6 162 52.5
MSTRG.28066 Avicennia marina HOM05D003890 ORTHO05D004514 5.1e-40 169.1 241 40.7
DCAR_003214 Daucus carota HOM05D003890 ORTHO05D004514 1.5e-39 167.5 160 53.1
Peaxi162Scf00953g00113 Petunia axillaris HOM05D003890 ORTHO05D004514 2.5e-39 166.8 218 42.7
MSTRG.17029 Avicennia marina HOM05D003890 ORTHO05D004514 3.3e-39 166.4 161 49.1
HanXRQChr16g0524491 Helianthus annuus HOM05D003890 ORTHO05D004514 3.3e-39 166.4 179 47.5
Nn7g36206 Nelumbo nucifera HOM05D003890 ORTHO05D004514 9.6e-39 164.9 242 42.6
Thhalv10015929m.g Eutrema salsugineum HOM05D003890 ORTHO05D004514 1.6e-38 164.1 115 69.6
MBI04_g40116_MAGBIO Magnolia biondii HOM05D003890 ORTHO05D004514 1.6e-38 164.1 237 40.9
HPP92_024873 Vanilla planifolia HOM05D003890 ORTHO05D004514 2.1e-38 163.7 202 46.0
Zm00001eb324740 Zea mays HOM05D003890 ORTHO05D004514 8.1e-38 161.8 151 51.7
Sopen01g034250 Solanum pennellii HOM05D003890 ORTHO05D004514 1.4e-37 161.0 222 39.6
Solyc01g087190.4 Solanum lycopersicum HOM05D003890 ORTHO05D004514 1.8e-37 160.6 222 39.6
MELO3C015193.2 Cucumis melo HOM05D003890 ORTHO05D004514 5.2e-37 159.1 200 45.0
Pp3c12_1270 Physcomitrium patens HOM05D003890 ORTHO05D004514 6.8e-37 158.7 232 41.8
CAN.G1560.2 Capsicum annuum HOM05D003890 ORTHO05D004514 8.9e-37 158.3 221 38.9
Nitab4.5_0001186g0010 Nicotiana tabacum HOM05D003890 ORTHO05D004514 8.9e-37 158.3 225 40.9
Nitab4.5_0004290g0020 Nicotiana tabacum HOM05D003890 ORTHO05D004514 1.2e-36 157.9 216 40.7
Pp3c9_10480 Physcomitrium patens HOM05D003890 ORTHO05D004514 7.6e-36 155.2 239 38.1
PGSC0003DMG400006801 Solanum tuberosum HOM05D003890 ORTHO05D004514 7.6e-36 155.2 222 38.7
SMO275G0040 Selaginella moellendorffii HOM05D003890 ORTHO05D004514 2.9e-35 153.3 139 55.4
Mapoly0069s0007 Marchantia polymorpha HOM05D003890 ORTHO05D004514 3.8e-35 152.9 197 43.7
Eucgr.B03687 Eucalyptus grandis HOM05D003890 ORTHO05D004514 1.1e-34 151.4 191 46.1
Mapoly0002s0228 Marchantia polymorpha HOM05D003890 ORTHO05D004514 5.4e-34 149.1 153 50.3
SEGI_02367 Sequoiadendron giganteum HOM05D003890 ORTHO05D004514 9.3e-34 148.3 109 59.6
AUR62000123 Chenopodium quinoa HOM05D003890 ORTHO05D004514 7.8e-33 145.2 234 39.7
arahy.Tifrunner.gnm1.ann1.13C5F2 Arachis hypogaea HOM05D003890 ORTHO05D004514 2.3e-32 143.7 227 40.5
CBR_g21098 Chara braunii HOM05D003890 ORTHO05D004514 2.5e-31 140.2 147 46.9
AagrBONN_evm.TU.Sc2ySwM_228.2147 Anthoceros agrestis HOM05D003890 ORTHO05D004514 5.6e-31 139.0 152 46.7
HanXRQChr01g0018191 Helianthus annuus HOM05D003890 ORTHO05D004514 5.6e-31 139.0 227 39.2
Lsat_1_v5_gn_4_31621 Lactuca sativa HOM05D003890 ORTHO05D004514 4.8e-30 136.0 159 44.7
Ah.06g194180 Amaranthus hybridus HOM05D003890 ORTHO05D004514 2.9e-27 126.7 261 36.8
CSS0039551 Camellia sinensis var. sinensis HOM05D003890 ORTHO05D004514 3.8e-27 126.3 95 66.3
arahy.Tifrunner.gnm1.ann1.V44IJD Arachis hypogaea HOM05D003890 ORTHO05D004514 6.4e-27 125.6 227 38.3
Sc09g0000720 Simmondsia chinensis HOM05D003890 ORTHO05D004514 2.1e-25 120.6 160 45.6
BcaC04g19383 Brassica carinata HOM05D003890 ORTHO05D004514 1.7e-24 117.5 198 36.9
arahy.Tifrunner.gnm1.ann1.11Y6U0 Arachis hypogaea HOM05D003890 ORTHO05D004514 1.6e-22 110.9 85 62.4
C09p56300 Brassica napus HOM05D003890 ORTHO05D004514 2.1e-22 110.5 212 34.4
BolC9t58499H Brassica oleracea HOM05D003890 ORTHO05D004514 2.1e-22 110.5 212 34.4
Sp6g24540 Schrenkiella parvula HOM05D003890 ORTHO05D004514 7.6e-20 102.1 210 33.8
A10p19900 Brassica napus HOM05D003890 ORTHO05D004514 3.2e-18 96.7 62 72.6
BraA10t44065Z Brassica rapa HOM05D003890 ORTHO05D004514 1.6e-14 84.3 51 74.5
BcaC04g19382 Brassica carinata HOM05D000916 ORTHO05D008653 2.1e-14 84.0 52 71.2


User provided reference genes

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