Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 7.7e-55 216.9 106 100.0
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 1.1e-29 133.3 92 69.6
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 2.5e-29 132.1 97 69.1
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 4.3e-29 131.3 95 70.5
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 5.6e-29 131.0 86 73.3
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 7.3e-29 130.6 91 70.3
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 1.6e-28 129.4 86 66.3
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.6e-28 129.4 103 66.0
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 2.1e-28 129.0 95 66.3
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 2.1e-28 129.0 96 66.7
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 2.1e-28 129.0 88 68.2
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 2.1e-28 129.0 86 70.9
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 2.8e-28 128.6 86 69.8
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 2.8e-28 128.6 96 66.7
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 2.8e-28 128.6 75 80.0
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 2.8e-28 128.6 89 70.8
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 2.8e-28 128.6 87 71.3
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 3.6e-28 128.3 96 65.6
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 3.6e-28 128.3 92 68.5
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 3.6e-28 128.3 92 69.6
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 4.7e-28 127.9 92 68.5
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 4.7e-28 127.9 81 75.3
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 4.7e-28 127.9 97 63.9
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 4.7e-28 127.9 92 66.3
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 6.2e-28 127.5 86 69.8
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 6.2e-28 127.5 96 66.7
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 6.2e-28 127.5 86 69.8
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 6.2e-28 127.5 96 66.7
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 6.2e-28 127.5 92 68.5
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 6.2e-28 127.5 91 69.2
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 6.2e-28 127.5 86 70.9
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 6.2e-28 127.5 101 62.4
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 8.0e-28 127.1 93 66.7
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 1.0e-27 126.7 88 68.2
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 1.0e-27 126.7 102 63.7
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 1.0e-27 126.7 103 61.2
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 1.0e-27 126.7 90 68.9
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 1.0e-27 126.7 87 71.3
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 1.0e-27 126.7 104 65.4
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 1.4e-27 126.3 93 66.7
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 1.4e-27 126.3 97 64.9
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 1.8e-27 125.9 101 65.3
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 1.8e-27 125.9 97 62.9
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 1.8e-27 125.9 75 77.3
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 1.8e-27 125.9 87 69.0
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 2.3e-27 125.6 71 77.5
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 2.3e-27 125.6 71 83.1
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 2.3e-27 125.6 88 69.3
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 2.3e-27 125.6 79 72.2
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 3.1e-27 125.2 70 81.4
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 3.1e-27 125.2 93 65.6
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 5.2e-27 124.4 71 81.7
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 5.2e-27 124.4 70 82.9
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 5.2e-27 124.4 72 77.8
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 5.2e-27 124.4 86 68.6
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 6.8e-27 124.0 85 68.2
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 6.8e-27 124.0 93 64.5
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 8.9e-27 123.6 73 76.7
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 8.9e-27 123.6 71 83.1
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 8.9e-27 123.6 76 73.7
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 1.2e-26 123.2 87 67.8
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 1.5e-26 122.9 71 81.7
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 1.5e-26 122.9 96 63.5
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 2.0e-26 122.5 82 69.5
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 2.0e-26 122.5 87 67.8
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 2.6e-26 122.1 75 76.0
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 3.4e-26 121.7 102 59.8
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 3.4e-26 121.7 71 76.1
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 3.4e-26 121.7 91 65.9
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 4.4e-26 121.3 70 80.0
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 4.4e-26 121.3 70 80.0
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 4.4e-26 121.3 88 68.2
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 5.8e-26 120.9 100 61.0
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 5.8e-26 120.9 71 78.9
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 7.5e-26 120.6 102 59.8
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 9.8e-26 120.2 84 65.5
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 1.3e-25 119.8 95 61.1
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.3e-25 119.8 75 72.0
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 1.3e-25 119.8 75 72.0
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 1.3e-25 119.8 75 73.3
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 6.4e-25 117.5 85 67.1
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 8.3e-25 117.1 71 74.6
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 8.3e-25 117.1 69 75.4
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 2.4e-24 115.5 93 60.2
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 2.4e-24 115.5 86 62.8
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 2.4e-24 115.5 91 60.4
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 4.1e-24 114.8 86 68.6
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 5.4e-24 114.4 105 56.2
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 9.2e-24 113.6 93 63.4
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 1.6e-23 112.8 88 68.2
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 4.6e-23 111.3 77 68.8
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 1.7e-22 109.4 87 63.2
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 3.0e-22 108.6 100 57.0
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 5.0e-22 107.8 78 64.1
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 1.5e-21 106.3 87 62.1
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 3.3e-21 105.1 68 70.6
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 7.3e-21 104.0 70 65.7
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 2.8e-20 102.1 138 44.9
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 3.6e-20 101.7 99 53.5
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 5.2e-19 97.8 55 76.4
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 2.0e-18 95.9 56 80.4
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 2.6e-18 95.5 68 60.3
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 1.7e-17 92.8 64 62.5
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 3.7e-17 91.7 93 54.8
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 1.9e-16 89.4 70 51.4
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 1.2e-10 70.1 37 81.1
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.3e-09 66.6 35 80.0
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 7.1e-08 60.8 59 57.6
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 2.1e-07 59.3 39 71.8
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 8.6e-06 53.9 38 68.4
Lsat_1_v5_gn_5_53160 Lactuca sativa HOM05D007267 ORTHO05D009053 8.6e-06 53.9 38 68.4


User provided reference genes

Program Settings