Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g2944 Utricularia gibba HOM05D007009 ORTHO05D008451 1.9e-124 449.1 223 100.0
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 7.8e-41 171.4 166 55.4
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 5.6e-39 165.2 163 55.2
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 2.4e-34 149.8 162 50.6
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 9.3e-34 147.9 176 46.0
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 8.7e-32 141.4 177 44.6
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 1.3e-30 137.5 177 45.2
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 2.4e-29 133.3 143 49.7
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 2.4e-29 133.3 149 49.0
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 2.4e-29 133.3 149 44.3
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 1.2e-28 131.0 177 44.6
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 3.4e-28 129.4 149 42.3
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 4.5e-28 129.0 142 48.6
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 4.5e-28 129.0 139 51.1
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 5.8e-28 128.6 149 43.0
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 7.6e-28 128.3 148 49.3
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 9.9e-28 127.9 145 46.9
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 1.3e-27 127.5 136 50.7
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 1.7e-27 127.1 142 46.5
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 2.9e-27 126.3 148 46.6
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 3.8e-27 125.9 143 44.1
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 3.8e-27 125.9 132 49.2
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 4.9e-27 125.6 149 45.0
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 4.9e-27 125.6 145 44.1
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 1.9e-26 123.6 139 47.5
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 1.9e-26 123.6 145 44.1
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 1.9e-26 123.6 140 45.0
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 2.4e-26 123.2 158 44.3
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 4.2e-26 122.5 151 47.0
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 4.2e-26 122.5 164 44.5
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 5.4e-26 122.1 170 43.5
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 5.4e-26 122.1 145 45.5
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 9.3e-26 121.3 151 45.7
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 9.3e-26 121.3 145 43.4
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 9.3e-26 121.3 140 45.0
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 1.2e-25 120.9 145 43.4
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 1.2e-25 120.9 154 43.5
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 2.1e-25 120.2 144 44.4
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 2.1e-25 120.2 153 43.1
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 2.1e-25 120.2 139 48.9
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 2.1e-25 120.2 145 42.1
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 2.7e-25 119.8 138 47.1
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 3.5e-25 119.4 168 42.3
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 3.5e-25 119.4 142 44.4
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 4.6e-25 119.0 139 45.3
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 4.6e-25 119.0 136 46.3
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 6.0e-25 118.6 168 43.5
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 1.0e-24 117.9 146 43.8
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 1.0e-24 117.9 151 46.4
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.3e-24 117.5 153 43.1
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 1.8e-24 117.1 145 44.8
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 1.8e-24 117.1 171 37.4
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 1.8e-24 117.1 153 43.1
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.8e-24 117.1 153 43.1
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 2.3e-24 116.7 133 47.4
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 2.3e-24 116.7 151 42.4
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 3.0e-24 116.3 142 42.3
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 3.9e-24 115.9 139 45.3
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 3.9e-24 115.9 142 47.2
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 3.9e-24 115.9 136 46.3
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 8.7e-24 114.8 135 46.7
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 1.1e-23 114.4 145 46.2
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 1.1e-23 114.4 138 46.4
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 1.1e-23 114.4 171 36.8
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 2.5e-23 113.2 143 42.0
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 3.3e-23 112.8 138 46.4
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 3.3e-23 112.8 138 44.2
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 4.3e-23 112.5 137 46.0
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 5.6e-23 112.1 143 45.5
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 5.6e-23 112.1 153 41.8
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 5.6e-23 112.1 138 45.7
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 5.6e-23 112.1 149 44.3
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 1.3e-22 110.9 137 43.8
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 1.3e-22 110.9 136 45.6
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 1.6e-22 110.5 138 43.5
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 1.6e-22 110.5 156 40.4
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 1.6e-22 110.5 139 43.9
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 2.1e-22 110.2 139 45.3
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 4.8e-22 109.0 157 40.8
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 1.8e-21 107.1 141 41.1
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 1.8e-21 107.1 140 45.7
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 3.1e-21 106.3 143 42.7
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 5.3e-21 105.5 168 38.7
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 9.0e-21 104.8 140 42.9
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 9.0e-21 104.8 129 42.6
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 1.5e-20 104.0 138 41.3
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 2.0e-20 103.6 142 41.5
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 4.5e-20 102.4 143 42.0
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 4.9e-19 99.0 156 39.7
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 6.4e-19 98.6 138 40.6
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 3.2e-18 96.3 144 41.7
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 2.1e-17 93.6 138 41.3
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 2.7e-17 93.2 131 39.7
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 1.0e-16 91.3 138 37.0
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 5.1e-16 89.0 158 35.4
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 3.3e-15 86.3 230 29.1
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 1.8e-13 80.5 131 35.1
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 5.8e-12 75.5 144 36.1
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 1.9e-10 70.5 107 38.3
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 2.5e-10 70.1 102 39.2
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 5.5e-10 68.9 54 57.4
Pp3c4_16120 Physcomitrium patens HOM05D007009 ORTHO05D008451 1.6e-09 67.4 126 34.9
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 7.9e-09 65.1 106 37.7
CSS0007469 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 2.8e-06 56.6 40 62.5
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 4.8e-06 55.8 107 34.6
BcaB01g02975 Brassica carinata HOM05D020738 ORTHO05D008451 6.3e-06 55.5 57 45.6
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 6.3e-06 55.5 104 35.6


User provided reference genes

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