Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 1.6e-149 532.7 260 100.0
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 5.7e-67 258.5 193 66.3
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 7.4e-67 258.1 194 65.5
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 2.0e-64 250.0 197 65.0
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 3.4e-64 249.2 192 64.1
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 6.5e-63 245.0 194 61.9
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.9e-62 243.4 188 62.8
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 1.6e-61 240.4 194 60.3
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.7e-61 239.6 188 61.7
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 3.6e-61 239.2 192 63.0
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 7.9e-61 238.0 196 58.2
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 7.9e-61 238.0 193 60.6
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 3.0e-60 236.1 186 62.4
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 3.9e-60 235.7 195 57.9
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 3.9e-60 235.7 195 58.5
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 3.9e-60 235.7 195 58.5
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 1.1e-59 234.2 194 58.8
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 3.3e-59 232.6 276 46.0
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 7.4e-59 231.5 196 58.7
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 9.7e-59 231.1 196 59.2
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 1.3e-58 230.7 192 59.9
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 4.8e-58 228.8 191 61.8
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 4.8e-58 228.8 196 58.2
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 8.2e-58 228.0 189 58.7
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 3.1e-57 226.1 195 57.4
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.1e-57 225.7 194 58.2
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.1e-57 225.7 194 58.2
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 5.3e-57 225.3 192 57.3
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 5.3e-57 225.3 189 58.2
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 6.9e-57 224.9 193 58.0
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 9.1e-57 224.6 194 58.2
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 9.1e-57 224.6 195 57.4
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 1.2e-56 224.2 196 56.6
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 1.5e-56 223.8 224 52.2
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.5e-56 223.8 194 57.7
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 3.4e-56 222.6 215 54.0
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.4e-56 222.6 194 57.2
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 3.4e-56 222.6 196 56.6
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 4.5e-56 222.2 200 54.0
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 4.5e-56 222.2 202 56.9
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.5e-56 222.2 194 57.7
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 7.7e-56 221.5 201 56.2
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 7.7e-56 221.5 194 57.7
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 7.7e-56 221.5 192 58.9
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 1.0e-55 221.1 190 56.3
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.7e-55 220.3 189 58.2
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 1.7e-55 220.3 199 58.8
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 2.2e-55 219.9 191 59.2
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 2.2e-55 219.9 194 57.2
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 3.8e-55 219.2 195 53.8
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 3.8e-55 219.2 197 56.9
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 3.8e-55 219.2 194 57.2
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 1.1e-54 217.6 215 53.0
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 1.4e-54 217.2 193 56.0
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 1.4e-54 217.2 199 55.3
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 3.2e-54 216.1 195 53.3
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 3.2e-54 216.1 194 55.7
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 3.2e-54 216.1 191 55.0
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 4.2e-54 215.7 193 55.4
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 5.5e-54 215.3 195 53.3
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 5.5e-54 215.3 195 53.3
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 5.5e-54 215.3 195 53.3
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 1.2e-53 214.2 195 52.8
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 1.6e-53 213.8 194 54.6
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 1.6e-53 213.8 197 53.3
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 2.1e-53 213.4 195 52.8
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 2.7e-53 213.0 194 54.1
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 6.1e-53 211.8 183 60.1
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 1.8e-52 210.3 198 51.5
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 3.0e-52 209.5 198 52.5
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 3.0e-52 209.5 188 54.8
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 5.2e-52 208.8 219 50.7
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 6.7e-52 208.4 192 53.6
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 8.8e-52 208.0 194 53.1
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 8.8e-52 208.0 191 51.8
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 1.5e-51 207.2 193 53.4
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 2.0e-51 206.8 194 53.1
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 2.6e-51 206.5 194 53.1
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 2.6e-51 206.5 198 52.0
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 3.3e-51 206.1 193 52.8
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.3e-50 204.1 187 55.6
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.7e-50 203.8 184 53.8
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.8e-49 200.3 186 54.8
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 3.1e-49 199.5 194 53.6
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.2e-48 197.6 192 53.1
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 5.9e-48 195.3 206 47.6
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 7.7e-48 194.9 166 60.8
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.0e-47 194.5 198 49.5
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 2.9e-47 193.0 157 58.6
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 1.5e-46 190.7 193 47.7
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 4.2e-46 189.1 185 51.9
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 7.2e-46 188.3 194 52.6
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.6e-45 186.0 194 51.0
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 4.7e-45 185.7 198 47.5
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 3.3e-43 179.5 189 46.0
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.7e-42 176.0 188 47.9
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 1.1e-41 174.5 195 48.7
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 5.9e-40 168.7 218 44.5
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 2.9e-39 166.4 151 55.6
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 8.5e-39 164.9 152 52.6
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 7.5e-35 151.8 178 47.2
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 2.9e-31 139.8 125 60.8
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 5.0e-31 139.0 122 60.7
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.9e-30 137.1 109 58.7
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 5.5e-30 135.6 122 59.0
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 7.2e-30 135.2 122 60.7
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 6.1e-29 132.1 143 51.0
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 8.0e-29 131.7 159 46.5
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.7e-27 125.6 116 53.4
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 6.3e-26 122.1 122 54.1
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 1.8e-25 120.6 131 50.4
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.8e-25 120.6 133 48.1
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 6.1e-21 105.5 126 47.6
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 6.1e-21 105.5 187 33.2
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.6e-19 100.1 111 47.7
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 4.6e-16 89.4 116 37.1
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 2.3e-15 87.0 65 64.6
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.3e-15 87.0 128 40.6
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 3.3e-14 83.2 64 64.1
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.6e-13 79.7 95 47.4
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.9e-09 67.4 45 68.9
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.3e-06 56.6 64 50.0
Cre16.g657150 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 5.6e-06 55.8 86 37.2
AUR62003487 Chenopodium quinoa HOM05D004023 ORTHO05D004681 7.3e-06 55.5 175 31.4
MCO01G622 Micromonas commoda HOM05D004023 ORTHO05D004681 7.3e-06 55.5 89 31.5
AUR62017796 Chenopodium quinoa HOM05D004023 ORTHO05D004681 9.5e-06 55.1 187 28.3


User provided reference genes

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