Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 1.1e-86 323.2 153 100.0
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 2.4e-73 278.9 153 85.0
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 4.1e-73 278.1 153 85.0
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 5.3e-73 277.7 149 85.2
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 1.5e-72 276.2 153 84.3
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 7.7e-72 273.9 153 83.7
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 1.0e-71 273.5 154 82.5
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 2.2e-71 272.3 153 82.4
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 2.9e-71 271.9 153 82.4
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 3.8e-71 271.6 153 82.4
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 3.8e-71 271.6 153 82.4
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 5.0e-71 271.2 153 82.4
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 6.5e-71 270.8 153 82.4
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 8.5e-71 270.4 153 82.4
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 8.5e-71 270.4 153 83.7
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 8.5e-71 270.4 153 81.7
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 1.1e-70 270.0 153 83.7
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 1.4e-70 269.6 152 80.9
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 1.9e-70 269.2 153 81.7
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.9e-70 269.2 153 81.7
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 2.5e-70 268.9 153 83.0
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 2.5e-70 268.9 153 82.4
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 2.5e-70 268.9 153 81.7
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 3.2e-70 268.5 153 83.0
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 3.2e-70 268.5 153 83.0
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 4.2e-70 268.1 153 81.7
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 7.2e-70 267.3 153 82.4
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 9.4e-70 266.9 153 80.4
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 1.2e-69 266.5 152 80.3
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 1.2e-69 266.5 153 82.4
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 1.2e-69 266.5 153 80.4
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 1.6e-69 266.2 153 82.4
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 1.6e-69 266.2 153 82.4
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 2.1e-69 265.8 153 80.4
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.1e-69 265.8 153 80.4
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 2.1e-69 265.8 153 81.7
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 2.7e-69 265.4 153 81.0
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 2.7e-69 265.4 153 81.7
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 3.6e-69 265.0 153 80.4
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 4.7e-69 264.6 153 81.0
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 6.1e-69 264.2 152 80.3
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 6.1e-69 264.2 152 80.9
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 6.1e-69 264.2 153 81.7
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 7.9e-69 263.8 153 80.4
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 7.9e-69 263.8 153 80.4
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 7.9e-69 263.8 153 79.7
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 1.0e-68 263.5 154 80.5
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 1.0e-68 263.5 152 80.9
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.4e-68 263.1 153 81.7
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.4e-68 263.1 153 81.7
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 1.4e-68 263.1 153 80.4
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 1.4e-68 263.1 153 79.7
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 1.4e-68 263.1 151 81.5
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 1.4e-68 263.1 153 79.7
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.8e-68 262.7 149 81.9
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.8e-68 262.7 153 79.1
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 1.8e-68 262.7 153 80.4
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 3.0e-68 261.9 153 80.4
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 3.0e-68 261.9 153 80.4
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 3.9e-68 261.5 153 81.0
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 3.9e-68 261.5 153 81.7
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 5.1e-68 261.2 153 81.7
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 6.7e-68 260.8 153 81.7
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 6.7e-68 260.8 153 81.7
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 6.7e-68 260.8 153 80.4
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 6.7e-68 260.8 153 81.7
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 8.8e-68 260.4 153 80.4
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 8.8e-68 260.4 155 79.4
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 8.8e-68 260.4 153 77.8
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 8.8e-68 260.4 153 81.7
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 1.1e-67 260.0 153 79.7
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 1.5e-67 259.6 153 79.7
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 2.0e-67 259.2 154 79.2
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 2.0e-67 259.2 155 77.4
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 3.3e-67 258.5 154 79.2
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 5.7e-67 257.7 153 79.7
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 1.1e-65 253.4 153 77.1
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 1.4e-65 253.1 153 77.8
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 1.4e-65 253.1 153 77.8
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 1.8e-65 252.7 157 79.0
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 2.4e-65 252.3 153 77.1
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 3.1e-65 251.9 153 77.1
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 7.0e-65 250.8 153 76.5
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 9.1e-65 250.4 153 76.5
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 9.1e-65 250.4 152 76.3
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 9.1e-65 250.4 152 76.3
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 9.1e-65 250.4 153 75.8
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 1.2e-64 250.0 153 77.1
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 1.6e-64 249.6 152 76.3
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 1.6e-64 249.6 152 76.3
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.6e-64 249.6 153 75.8
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 1.6e-64 249.6 153 77.8
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 2.0e-64 249.2 153 76.5
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 2.0e-64 249.2 153 75.8
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 2.0e-64 249.2 153 77.1
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 2.6e-64 248.8 153 75.8
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 3.5e-64 248.4 153 77.1
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 5.9e-64 247.7 153 76.5
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.0e-63 246.9 153 75.8
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 1.3e-63 246.5 153 75.8
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 2.2e-63 245.7 153 72.5
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 3.8e-63 245.0 153 72.5
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 8.5e-63 243.8 147 76.9
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 1.5e-62 243.0 147 76.9
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.9e-62 242.7 153 75.2
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 6.1e-61 237.7 151 70.9
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 4.0e-60 235.0 152 73.0
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 5.2e-60 234.6 152 73.7
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 8.8e-60 233.8 153 69.9
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 8.8e-60 233.8 235 54.0
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 2.6e-59 232.3 152 73.0
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 3.1e-57 225.3 153 69.3
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 5.3e-57 224.6 123 83.7
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 2.7e-56 222.2 156 63.5
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 1.5e-54 216.5 123 82.1
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 2.5e-54 215.7 123 82.1
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.2e-54 215.3 126 78.6
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 4.2e-54 214.9 157 66.9
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 9.4e-54 213.8 123 80.5
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 3.6e-53 211.8 123 81.3
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 2.0e-51 206.1 140 71.4
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 4.4e-51 204.9 123 76.4
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 4.1e-49 198.4 153 59.5
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.2e-42 176.0 153 58.2
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 5.4e-41 171.4 100 80.0
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.9e-39 165.6 91 80.2
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 7.0e-33 144.4 84 81.0
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 4.6e-32 141.7 86 77.9
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 4.6e-32 141.7 84 81.0
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 3.0e-31 139.0 149 51.0
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 4.0e-28 128.6 87 72.4
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 2.4e-25 119.4 73 72.6
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 4.1e-25 118.6 73 72.6
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 2.3e-23 112.8 70 74.3
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 1.5e-11 73.6 43 76.7


User provided reference genes

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