Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g2891 Utricularia gibba HOM05D002624 ORTHO05D002796 1.6e-109 399.4 201 100.0
Rhsim09G0076300 Rhododendron simsii HOM05D002624 ORTHO05D002796 2.2e-18 96.7 204 37.3
MSTRG.13686 Avicennia marina HOM05D002624 ORTHO05D002796 4.2e-17 92.4 192 37.0
MSTRG.2059 Avicennia marina HOM05D002624 ORTHO05D002796 1.6e-16 90.5 197 38.6
Migut.E00698 Erythranthe guttata HOM05D002624 ORTHO05D002796 4.6e-16 89.0 196 37.8
Hma1.2p1_0122F.1_g057570 Hydrangea macrophylla HOM05D002624 ORTHO05D002796 6.0e-16 88.6 178 39.3
Sopen02g003670 Solanum pennellii HOM05D002624 ORTHO05D002796 3.9e-15 85.9 189 37.6
CSS0039901 Camellia sinensis var. sinensis HOM05D002624 ORTHO05D002796 6.6e-15 85.1 193 36.8
SGA_v2.0_scaffold187G40278 Striga asiatica HOM05D002624 ORTHO05D002796 1.1e-14 84.3 194 38.1
Actinidia04323 Actinidia chinensis HOM05D002624 ORTHO05D002796 1.5e-14 84.0 233 33.5
MSTRG.8084 Avicennia marina HOM05D002624 ORTHO05D002796 1.9e-14 83.6 194 37.1
Solyc02g014090.3 Solanum lycopersicum HOM05D002624 ORTHO05D002796 3.3e-14 82.8 200 36.0
PGSC0003DMG400010579 Solanum tuberosum HOM05D002624 ORTHO05D002796 5.6e-14 82.0 174 38.5
Actinidia04060 Actinidia chinensis HOM05D002624 ORTHO05D002796 6.2e-13 78.6 193 35.2
Sed0021624 Sechium edule HOM05D002624 ORTHO05D002796 8.1e-13 78.2 173 36.4
Cc11_g02290 Coffea canephora HOM05D002624 ORTHO05D002796 1.8e-12 77.0 190 36.3
CAN.G157.28 Capsicum annuum HOM05D002624 ORTHO05D002796 5.3e-12 75.5 173 37.6
Oeu026902.1 Olea europaea HOM05D002624 ORTHO05D002796 6.9e-12 75.1 259 30.5
SGA_v2.0_scaffold88G27229 Striga asiatica HOM05D002624 ORTHO05D002796 1.2e-11 74.3 188 36.7
Lj3C849T16 Lonicera japonica HOM05D002624 ORTHO05D002796 3.4e-11 72.8 194 36.1
Duzib132G0519 Durio zibethinus HOM05D002624 ORTHO05D002796 9.9e-11 71.2 181 35.4
DCAR_002577 Daucus carota HOM05D002624 ORTHO05D002796 2.2e-10 70.1 193 34.7
CiPaw.06G060600 Carya illinoinensis HOM05D002624 ORTHO05D002796 2.9e-10 69.7 184 37.5
COL.COLO4_19601 Corchorus olitorius HOM05D002624 ORTHO05D002796 2.9e-10 69.7 199 35.2
MD16G1002200 Malus domestica HOM05D002624 ORTHO05D002796 3.8e-10 69.3 197 33.0
QL03p046358 Quercus lobata HOM05D002624 ORTHO05D002796 3.8e-10 69.3 201 30.8
DCAR_026900 Daucus carota HOM05D002624 ORTHO05D002796 4.9e-10 68.9 210 36.7
Eucgr.J00866 Eucalyptus grandis HOM05D002624 ORTHO05D002796 6.4e-10 68.6 193 33.7
Gohir.D13G061800 Gossypium hirsutum HOM05D002624 ORTHO05D002796 8.4e-10 68.2 173 38.2
Sed0003440 Sechium edule HOM05D002624 ORTHO05D002796 1.1e-09 67.8 174 35.1
PGSC0003DMG400019763 Solanum tuberosum HOM05D002624 ORTHO05D002796 1.4e-09 67.4 190 35.3
HanXRQChr13g0387751 Helianthus annuus HOM05D002624 ORTHO05D002796 1.9e-09 67.0 218 31.2
Thecc.02G160100 Theobroma cacao HOM05D002624 ORTHO05D002796 1.9e-09 67.0 176 34.1
Nn3g18655 Nelumbo nucifera HOM05D002624 ORTHO05D002796 3.2e-09 66.2 192 32.3
Duzib052G0930 Durio zibethinus HOM05D002624 ORTHO05D002796 4.2e-09 65.9 176 34.7
Gorai.013G070300 Gossypium raimondii HOM05D002624 ORTHO05D002796 4.2e-09 65.9 173 37.6
Potri.005G092800 Populus trichocarpa HOM05D002624 ORTHO05D002796 4.2e-09 65.9 176 33.0
Gohir.A13G060100 Gossypium hirsutum HOM05D002624 ORTHO05D002796 5.4e-09 65.5 173 37.6
HanXRQChr06g0171521 Helianthus annuus HOM05D002624 ORTHO05D002796 5.4e-09 65.5 171 32.7
PGR083G2331 Punica granatum HOM05D002624 ORTHO05D002796 5.4e-09 65.5 177 36.2
CsaV3_3G031410 Cucumis sativus L. HOM05D002624 ORTHO05D002796 1.2e-08 64.3 153 35.3
Prupe.1G347300 Prunus persica HOM05D002624 ORTHO05D002796 1.2e-08 64.3 179 31.8
Sabra05G0076900 Salix brachista HOM05D002624 ORTHO05D002796 1.2e-08 64.3 206 30.1
CiPaw.06G060500 Carya illinoinensis HOM05D002624 ORTHO05D002796 1.6e-08 63.9 201 33.3
Thhalv10004348m.g Eutrema salsugineum HOM05D002624 ORTHO05D002796 2.1e-08 63.5 201 32.3
Sopen11g017760 Solanum pennellii HOM05D002624 ORTHO05D002796 2.1e-08 63.5 174 34.5
Solyc11g039960.2 Solanum lycopersicum HOM05D002624 ORTHO05D002796 3.5e-08 62.8 174 33.9
TAR629G1845 Trochodendron aralioides HOM05D002624 ORTHO05D002796 3.5e-08 62.8 207 31.9
Duzib248G0716 Durio zibethinus HOM05D002624 ORTHO05D002796 6.0e-08 62.0 172 34.9
Migut.L00860 Erythranthe guttata HOM05D002624 ORTHO05D002796 6.0e-08 62.0 192 32.8
Gorai.005G210600 Gossypium raimondii HOM05D002624 ORTHO05D002796 6.0e-08 62.0 193 35.2
Lsat_1_v5_gn_3_35460 Lactuca sativa HOM05D002624 ORTHO05D002796 6.0e-08 62.0 144 32.6
Gohir.A12G133800 Gossypium hirsutum HOM05D002624 ORTHO05D002796 7.9e-08 61.6 183 33.3
TWI81G0526 Tripterygium wilfordii HOM05D002624 ORTHO05D002796 7.9e-08 61.6 149 36.2
MELO3C024023.2 Cucumis melo HOM05D002624 ORTHO05D002796 1.0e-07 61.2 172 32.0
Carub.0006s2092 Capsella rubella HOM05D002624 ORTHO05D002796 1.8e-07 60.5 199 33.2
Potri.007G071500 Populus trichocarpa HOM05D002624 ORTHO05D002796 1.8e-07 60.5 174 32.8
A03p46380 Brassica napus HOM05D002624 ORTHO05D002796 2.3e-07 60.1 174 31.0
BraA03t13764Z Brassica rapa HOM05D002624 ORTHO05D002796 2.3e-07 60.1 174 31.0
Cpa.g.sc0.146 Carica papaya HOM05D002624 ORTHO05D002796 2.3e-07 60.1 196 32.1
Gohir.A03G164700 Gossypium hirsutum HOM05D002624 ORTHO05D002796 2.3e-07 60.1 193 34.7
PGR044G2474 Punica granatum HOM05D002624 ORTHO05D002796 2.3e-07 60.1 188 34.6
GSVIVG01012047001 Vitis vinifera HOM05D002624 ORTHO05D002796 2.3e-07 60.1 195 32.3
Aqoxy3G04257 Aquilegia oxysepala HOM05D002624 ORTHO05D002796 3.0e-07 59.7 191 33.5
Manes.11G107501 Manihot esculenta HOM05D002624 ORTHO05D002796 3.0e-07 59.7 168 31.5
Sp2g23990 Schrenkiella parvula HOM05D002624 ORTHO05D002796 3.0e-07 59.7 201 30.8
AL6G34320 Arabidopsis lyrata HOM05D002624 ORTHO05D002796 3.9e-07 59.3 197 31.5
C07p44400 Brassica napus HOM05D002624 ORTHO05D002796 5.1e-07 58.9 190 29.5
BolC7t44962H Brassica oleracea HOM05D002624 ORTHO05D002796 5.1e-07 58.9 190 29.5
Aa31LG11G2620 Aethionema arabicum HOM05D002624 ORTHO05D002796 8.7e-07 58.2 193 31.6
ECA233G4240 Erigeron canadensis HOM05D002624 ORTHO05D002796 8.7e-07 58.2 198 31.8
Gohir.D02G187900 Gossypium hirsutum HOM05D002624 ORTHO05D002796 8.7e-07 58.2 193 34.2
HanXRQChr12g0366391 Helianthus annuus HOM05D002624 ORTHO05D002796 2.5e-06 56.6 174 33.3
HanXRQChr17g0544931 Helianthus annuus HOM05D002624 ORTHO05D002796 4.3e-06 55.8 168 28.0
unitig_8.g3110 Utricularia gibba HOM05D052133 ORTHO05D051527 5.6e-06 55.5 52 61.5
arahy.Tifrunner.gnm1.ann1.7E86KB Arachis hypogaea HOM05D002624 ORTHO05D002796 7.4e-06 55.1 148 32.4
A10p28470 Brassica napus HOM05D002624 ORTHO05D002796 7.4e-06 55.1 161 34.2
C09p68740 Brassica napus HOM05D002624 ORTHO05D002796 7.4e-06 55.1 208 32.2
BolC9t59621H Brassica oleracea HOM05D002624 ORTHO05D002796 7.4e-06 55.1 208 32.2
BraA10t44895Z Brassica rapa HOM05D002624 ORTHO05D002796 7.4e-06 55.1 161 34.2
CANSAT56G1621 Cannabis sativa HOM05D002624 ORTHO05D002796 7.4e-06 55.1 129 35.7


User provided reference genes

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