Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g2879 Utricularia gibba HOM05D004860 ORTHO05D006366 1.2e-175 619.8 310 100.0
Oeu029304.1 Olea europaea HOM05D004860 ORTHO05D006366 1.2e-143 513.5 310 81.0
Migut.N00151 Erythranthe guttata HOM05D004860 ORTHO05D006366 1.5e-143 513.1 300 82.7
SalBow5G0733 Salvia bowleyana HOM05D004860 ORTHO05D006366 3.4e-143 511.9 307 81.8
SalBow5G4413 Salvia bowleyana HOM05D004860 ORTHO05D006366 3.4e-143 511.9 307 81.8
MSTRG.24756 Avicennia marina HOM05D004860 ORTHO05D006366 1.2e-140 503.4 297 81.5
Actinidia40192 Actinidia chinensis HOM05D004860 ORTHO05D006366 7.3e-138 494.2 309 79.0
CSS0038220 Camellia sinensis var. sinensis HOM05D004860 ORTHO05D006366 9.6e-138 493.8 292 82.5
Potri.008G202300 Populus trichocarpa HOM05D004860 ORTHO05D006366 8.9e-136 487.3 293 79.9
Solyc01g080140.3 Solanum lycopersicum HOM05D004860 ORTHO05D006366 1.2e-135 486.9 315 76.2
Sopen01g031920 Solanum pennellii HOM05D004860 ORTHO05D006366 2.6e-135 485.7 315 76.2
Cc03_g03100 Coffea canephora HOM05D004860 ORTHO05D006366 7.6e-135 484.2 310 76.1
CiPaw.02G092200 Carya illinoinensis HOM05D004860 ORTHO05D006366 2.2e-134 482.6 309 77.0
MD16G1183500 Malus domestica HOM05D004860 ORTHO05D006366 2.9e-134 482.3 309 76.7
Nitab4.5_0001247g0010 Nicotiana tabacum HOM05D004860 ORTHO05D006366 6.4e-134 481.1 308 76.9
TAR365G0160 Trochodendron aralioides HOM05D004860 ORTHO05D006366 8.4e-134 480.7 296 78.7
ECA240G4413 Erigeron canadensis HOM05D004860 ORTHO05D006366 1.9e-133 479.6 301 78.4
COL.COLO4_21645 Corchorus olitorius HOM05D004860 ORTHO05D006366 5.4e-133 478.0 306 75.8
RcHm_v2.0_Chr4g0418381 Rosa chinensis HOM05D004860 ORTHO05D006366 7.1e-133 477.6 310 75.5
Ciclev10005293m.g Citrus clementina HOM05D004860 ORTHO05D006366 1.2e-132 476.9 307 75.6
FAN07G1456 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.6e-132 476.5 310 75.5
CANSAT78G2493 Cannabis sativa HOM05D004860 ORTHO05D006366 2.1e-132 476.1 310 74.2
Lalb_Chr07g0177321 Lupinus albus HOM05D004860 ORTHO05D006366 2.1e-132 476.1 292 78.8
MD13G1182900 Malus domestica HOM05D004860 ORTHO05D006366 2.1e-132 476.1 303 77.2
FAN22G2324 Fragaria x ananassa HOM05D004860 ORTHO05D006366 3.5e-132 475.3 310 75.5
Dinv38393 Davidia involucrata HOM05D001530 ORTHO05D004168 4.6e-132 474.9 303 78.5
Glyma.07G256800 Glycine max HOM05D004860 ORTHO05D006366 6.0e-132 474.6 310 74.8
Thecc.04G221400 Theobroma cacao HOM05D004860 ORTHO05D006366 6.0e-132 474.6 313 74.8
FvH4_4g14470 Fragaria vesca HOM05D004860 ORTHO05D006366 7.8e-132 474.2 302 76.5
TWI73G0632 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 7.8e-132 474.2 310 76.5
Glyma.17G017300 Glycine max HOM05D004860 ORTHO05D006366 1.0e-131 473.8 310 74.5
Gohir.A05G316600 Gossypium hirsutum HOM05D004860 ORTHO05D006366 1.0e-131 473.8 310 75.5
Duzib268G1873 Durio zibethinus HOM05D004860 ORTHO05D006366 1.3e-131 473.4 300 76.3
FAN12G3962 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.3e-131 473.4 302 76.5
Lj4g0005512 Lotus japonicus HOM05D004860 ORTHO05D006366 1.3e-131 473.4 293 77.5
TPR.G20138 Trifolium pratense HOM05D004860 ORTHO05D006366 1.3e-131 473.4 310 74.2
GSVIVG01017886001 Vitis vinifera HOM05D004860 ORTHO05D006366 1.3e-131 473.4 310 75.8
arahy.Tifrunner.gnm1.ann1.PDW3QZ Arachis hypogaea HOM05D004860 ORTHO05D006366 1.7e-131 473.0 310 76.1
Cfa015580 Carpinus fangiana HOM05D004860 ORTHO05D006366 1.7e-131 473.0 311 76.8
TAR636G2819 Trochodendron aralioides HOM05D004860 ORTHO05D006366 1.7e-131 473.0 296 77.4
PGR031G2771 Punica granatum HOM05D004860 ORTHO05D006366 2.3e-131 472.6 303 75.9
Duzib212G0960 Durio zibethinus HOM05D004860 ORTHO05D006366 3.0e-131 472.2 319 74.0
arahy.Tifrunner.gnm1.ann1.K193BP Arachis hypogaea HOM05D004860 ORTHO05D006366 3.9e-131 471.9 310 75.8
QL06p004255 Quercus lobata HOM05D004860 ORTHO05D006366 3.9e-131 471.9 307 76.2
Nn4g26191 Nelumbo nucifera HOM05D004860 ORTHO05D006366 6.6e-131 471.1 311 74.6
ClCG05G005460 Citrullus lanatus HOM05D004860 ORTHO05D006366 8.7e-131 470.7 300 74.7
THA.LOC104822311 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 1.9e-130 469.5 308 74.4
Sed0000368 Sechium edule HOM05D004860 ORTHO05D006366 4.3e-130 468.4 300 75.3
MELO3C006570.2 Cucumis melo HOM05D004860 ORTHO05D006366 5.6e-130 468.0 299 74.6
HanXRQChr09g0248101 Helianthus annuus HOM05D004860 ORTHO05D006366 5.6e-130 468.0 290 79.0
Ca_21591_v3 Cicer arietinum L. HOM05D004860 ORTHO05D006366 7.3e-130 467.6 293 76.5
Medtr4g117310 Medicago truncatula HOM05D004860 ORTHO05D006366 7.3e-130 467.6 310 74.2
Atru.chr4.2574 Acer truncatum HOM05D004860 ORTHO05D006366 1.6e-129 466.5 308 73.1
Carub.0006s1737 Capsella rubella HOM05D004860 ORTHO05D006366 2.1e-129 466.1 310 73.2
Phvul.003G093000 Phaseolus vulgaris HOM05D004860 ORTHO05D006366 2.1e-129 466.1 288 77.4
Eucgr.D02658 Eucalyptus grandis HOM05D004860 ORTHO05D006366 4.8e-129 464.9 309 72.8
THA.LOC104818790 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 6.2e-129 464.5 318 72.6
CsaV3_3G013760 Cucumis sativus L. HOM05D004860 ORTHO05D006366 8.1e-129 464.2 299 73.9
Ah.07g203980 Amaranthus hybridus HOM05D004860 ORTHO05D006366 1.1e-128 463.8 310 72.6
AT5G19050 Arabidopsis thaliana HOM05D004860 ORTHO05D006366 1.1e-128 463.8 310 72.9
Psat4g031440 Pisum sativum HOM05D004860 ORTHO05D006366 1.1e-128 463.8 293 75.8
BolC3t13554H Brassica oleracea HOM05D004860 ORTHO05D006366 1.8e-128 463.0 310 72.9
Thhalv10013904m.g Eutrema salsugineum HOM05D004860 ORTHO05D006366 3.1e-128 462.2 310 72.9
AL6G30430 Arabidopsis lyrata HOM05D004860 ORTHO05D006366 4.0e-128 461.8 310 72.9
Lsat_1_v5_gn_7_67361 Lactuca sativa HOM05D004860 ORTHO05D006366 4.0e-128 461.8 312 74.0
Aqoxy2G03261 Aquilegia oxysepala HOM05D004860 ORTHO05D006366 6.9e-128 461.1 288 77.4
Gorai.009G340700 Gossypium raimondii HOM05D004860 ORTHO05D006366 6.9e-128 461.1 324 71.9
Sp6g25330 Schrenkiella parvula HOM05D004860 ORTHO05D006366 6.9e-128 461.1 310 72.9
BcaB01g04878 Brassica carinata HOM05D004860 ORTHO05D006366 9.0e-128 460.7 310 72.6
BcaB01g05289 Brassica carinata HOM05D004860 ORTHO05D006366 9.0e-128 460.7 310 72.6
BraA10t44127Z Brassica rapa HOM05D004860 ORTHO05D006366 9.0e-128 460.7 310 71.9
Lj3C761T9 Lonicera japonica HOM05D004860 ORTHO05D006366 9.0e-128 460.7 311 71.4
Manes.15G022900 Manihot esculenta HOM05D004860 ORTHO05D006366 9.0e-128 460.7 310 73.2
BcaC04g18624 Brassica carinata HOM05D004860 ORTHO05D006366 1.2e-127 460.3 310 72.6
A10p20640 Brassica napus HOM05D004860 ORTHO05D006366 1.2e-127 460.3 310 71.9
Aa31LG11G10670 Aethionema arabicum HOM05D004860 ORTHO05D006366 1.5e-127 459.9 323 71.8
BraA03t10247Z Brassica rapa HOM05D004860 ORTHO05D006366 4.5e-127 458.4 310 72.6
Peaxi162Scf01766g00011 Petunia axillaris HOM05D004860 ORTHO05D006366 5.8e-127 458.0 310 73.9
BolC9t58612H Brassica oleracea HOM05D004860 ORTHO05D006366 9.9e-127 457.2 310 72.3
CAN.G183.30 Capsicum annuum HOM05D004860 ORTHO05D006366 1.3e-126 456.8 308 74.7
BcaB08g36622 Brassica carinata HOM05D004860 ORTHO05D006366 1.7e-126 456.4 310 71.9
C09p57430 Brassica napus HOM05D004860 ORTHO05D006366 1.7e-126 456.4 310 72.3
Migut.G00288 Erythranthe guttata HOM05D004860 ORTHO05D006366 1.7e-126 456.4 301 75.1
CARHR193940 Cardamine hirsuta HOM05D004860 ORTHO05D006366 4.9e-126 454.9 310 71.6
PSO407G0112 Papaver somniferum HOM05D004860 ORTHO05D006366 4.2e-125 451.8 308 71.4
AUR62030079 Chenopodium quinoa HOM05D004860 ORTHO05D006366 7.1e-125 451.1 284 76.4
PSO170G1688 Papaver somniferum HOM05D004860 ORTHO05D006366 7.1e-125 451.1 308 71.4
MBI17_g12009_MAGBIO Magnolia biondii HOM05D004860 ORTHO05D006366 1.6e-124 449.9 309 72.5
Haze_00965 Corylus avellana HOM05D004860 ORTHO05D006366 2.1e-124 449.5 386 61.9
Ah.13g074180 Amaranthus hybridus HOM05D004860 ORTHO05D006366 2.7e-124 449.1 310 71.0
SEGI_28969 Sequoiadendron giganteum HOM05D004860 ORTHO05D006366 1.3e-123 446.8 286 75.5
EL10Ac3g06352 Beta vulgaris HOM05D004860 ORTHO05D006366 1.8e-123 446.4 343 65.6
Hund12197 Selenicereus undatus HOM05D004860 ORTHO05D000105 6.7e-123 444.5 272 79.4
Prupe.1G151200 Prunus persica HOM05D004860 ORTHO05D006366 1.1e-122 443.7 268 79.5
C03p10800 Brassica napus HOM05D004860 ORTHO05D006366 2.5e-122 442.6 301 72.4
CDE02G3435 Ceratophyllum demersum HOM05D004860 ORTHO05D006366 3.3e-122 442.2 287 73.5
Zm00001eb303280 Zea mays HOM05D004860 ORTHO05D006366 8.1e-121 437.6 298 71.8
Os07g0211800 Oryza sativa ssp. japonica HOM05D004860 ORTHO05D006366 1.8e-120 436.4 303 70.0
CiPaw.01G159800 Carya illinoinensis HOM05D004860 ORTHO05D006366 8.4e-118 427.6 310 69.4
A03p09270 Brassica napus HOM05D004860 ORTHO05D006366 7.1e-117 424.5 293 72.4
AUR62038223 Chenopodium quinoa HOM05D004860 ORTHO05D006366 2.1e-116 422.9 270 75.9
Cpa.g.sc16.26 Carica papaya HOM05D004860 ORTHO05D006366 2.3e-115 419.5 308 69.5
Gohir.D05G318100 Gossypium hirsutum HOM05D004860 ORTHO05D006366 5.1e-115 418.3 310 68.4
Actinidia12990 Actinidia chinensis HOM05D004860 ORTHO05D006366 3.7e-113 412.1 335 66.6
Sabra08G0159200 Salix brachista HOM05D004860 ORTHO05D006366 1.4e-112 410.2 245 81.2
AagrBONN_evm.TU.Sc2ySwM_117.2400 Anthoceros agrestis HOM05D004860 ORTHO05D006366 2.0e-111 406.4 286 68.9
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 1.3e-110 403.7 302 70.9
Lj6A565G28 Lonicera japonica HOM05D004860 ORTHO05D006366 3.9e-107 392.1 262 74.4
Pp3c4_4720 Physcomitrium patens HOM05D004860 ORTHO05D006366 3.3e-106 389.0 283 65.4
SMO119G0283 Selaginella moellendorffii HOM05D004860 ORTHO05D006366 2.2e-105 386.3 287 67.6
Rhsim04G0207200 Rhododendron simsii HOM05D004860 ORTHO05D006366 4.1e-104 382.1 300 66.7
vmacro08274 Vaccinium macrocarpon HOM05D004860 ORTHO05D006366 5.3e-104 381.7 269 71.7
SGA_v2.0_scaffold166G38376 Striga asiatica HOM05D004860 ORTHO05D006366 5.9e-103 378.3 263 73.8
SalBow2G3077 Salvia bowleyana HOM05D004860 ORTHO05D006366 7.2e-101 371.3 296 65.2
Mapoly0095s0018 Marchantia polymorpha HOM05D004860 ORTHO05D006366 2.7e-100 369.4 292 60.3
Nn1g02160 Nelumbo nucifera HOM05D004860 ORTHO05D006366 2.4e-96 356.3 263 69.2
TWI53G0789 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 2.2e-94 349.7 226 76.1
Oeu017197.2 Olea europaea HOM05D004860 ORTHO05D006366 5.0e-94 348.6 228 78.1
Manes.03G184900 Manihot esculenta HOM05D004860 ORTHO05D006366 3.0e-91 339.3 236 71.2
ATR0626G115 Amborella trichopoda HOM05D004860 ORTHO05D006366 2.6e-90 336.3 216 74.5
Sc13g0003950 Simmondsia chinensis HOM05D004860 ORTHO05D006366 1.3e-78 297.4 181 81.8
VMungo1215G0515 Vigna mungo HOM05D004860 ORTHO05D006366 8.5e-78 294.7 202 73.3
Actinidia23474 Actinidia chinensis HOM05D004860 ORTHO05D006366 2.9e-62 243.0 265 52.5
FAN17G0307 Fragaria x ananassa HOM05D004860 ORTHO05D006366 3.7e-57 226.1 139 77.0
Eucgr.B01143 Eucalyptus grandis HOM05D004860 ORTHO05D006366 4.5e-55 219.2 153 67.3
HPP92_027344 Vanilla planifolia HOM05D004860 ORTHO05D006366 1.9e-53 213.8 153 68.6
Nitab4.5_0002954g0030 Nicotiana tabacum HOM05D004860 ORTHO05D006366 2.5e-53 213.4 154 72.7
SHI00370 Sapria himalayana HOM05D004860 ORTHO05D000023 2.6e-50 203.4 136 75.0
Hund22791 Selenicereus undatus HOM05D004860 ORTHO05D006366 9.8e-50 201.4 132 72.7
Cc02_g31730 Coffea canephora HOM05D004860 ORTHO05D006366 4.7e-44 182.6 108 76.9
VMungo1215G0712 Vigna mungo HOM05D004860 ORTHO05D006366 1.1e-43 181.4 108 75.0
PRCOL_00003006 Prasinoderma coloniale HOM05D004860 ORTHO05D006366 2.1e-36 157.1 276 42.4
Cc09_g08330 Coffea canephora HOM05D004860 ORTHO05D006366 8.3e-33 145.2 112 65.2
CBR_g23274 Chara braunii HOM05D004860 ORTHO05D006366 3.2e-32 143.3 129 55.8
Cre06.g283034 Chlamydomonas reinhardtii HOM05D004860 ORTHO05D006366 2.3e-30 137.1 308 31.8
Cc01_g03740 Coffea canephora HOM05D004860 ORTHO05D006366 1.8e-27 127.5 117 58.1
SHI00369 Sapria himalayana HOM05D004860 ORTHO05D006366 1.9e-24 117.5 100 58.0
Cfa023854 Carpinus fangiana HOM05D004860 ORTHO05D126341 7.8e-23 112.1 296 30.4
DCAR_002416 Daucus carota HOM05D004860 ORTHO05D006366 2.3e-22 110.5 86 61.6
Mapoly0174s0021 Marchantia polymorpha HOM05D004860 ORTHO05D006366 1.4e-19 101.3 87 57.5
HPP92_027343 Vanilla planifolia HOM05D004860 ORTHO05D006366 1.4e-19 101.3 64 75.0
DCAR_030597 Daucus carota HOM05D004860 ORTHO05D006366 2.2e-17 94.0 52 84.6
Lj6C565T4 Lonicera japonica HOM05D004860 ORTHO05D006366 3.8e-17 93.2 53 77.4
THA.LOC104820105 Tarenaya hassleriana HOM05D001530 ORTHO05D004168 1.4e-16 91.3 53 79.2
CBR_g23273 Chara braunii HOM05D004860 ORTHO05D006366 9.3e-16 88.6 84 48.8
Cc00_g00380 Coffea canephora HOM05D004860 ORTHO05D006366 4.6e-15 86.3 51 76.5
A02p05180 Brassica napus HOM05D004860 ORTHO05D006366 5.1e-14 82.8 91 53.8
BraA02t05478Z Brassica rapa HOM05D004860 ORTHO05D006366 6.6e-14 82.4 93 54.8
Cc11_g00440 Coffea canephora HOM05D004860 ORTHO05D005444 2.6e-10 70.5 51 64.7
HPP92_017189 Vanilla planifolia HOM05D004860 ORTHO05D006366 2.3e-06 57.4 31 87.1


User provided reference genes

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