Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_78.g29619 Utricularia gibba HOM05D004932 ORTHO05D005622 1.3e-150 536.6 309 100.0
unitig_749.g14227 Utricularia gibba HOM05D004932 ORTHO05D005622 4.0e-144 515.0 346 89.0
MSTRG.10579 Avicennia marina HOM05D004932 ORTHO05D005622 1.4e-80 303.9 276 59.1
Medtr6g092180 Medicago truncatula HOM05D004932 ORTHO05D005622 5.3e-80 302.0 256 60.2
SalBow1G2721 Salvia bowleyana HOM05D004932 ORTHO05D005622 2.0e-79 300.1 276 57.2
CANSAT56G0365 Cannabis sativa HOM05D004932 ORTHO05D005622 1.3e-78 297.4 265 57.7
Dinv42295 Davidia involucrata HOM05D004932 ORTHO05D005622 6.5e-78 295.0 268 58.2
Medtr6g090810 Medicago truncatula HOM05D004932 ORTHO05D005622 8.5e-78 294.7 264 58.3
PGSC0003DMG400008434 Solanum tuberosum HOM05D004932 ORTHO05D005622 5.5e-77 292.0 287 55.1
Medtr6g091780 Medicago truncatula HOM05D004932 ORTHO05D005622 2.7e-76 289.7 278 55.0
Nitab4.5_0000713g0230 Nicotiana tabacum HOM05D004932 ORTHO05D005622 3.6e-76 289.3 280 55.7
Nitab4.5_0007297g0010 Nicotiana tabacum HOM05D004932 ORTHO05D005622 3.6e-76 289.3 280 55.7
Actinidia29889 Actinidia chinensis HOM05D004932 ORTHO05D005622 1.4e-75 287.3 281 54.8
Hma1.2p1_0798F.1_g219580 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 1.4e-75 287.3 283 53.7
Ca_25616_v3 Cicer arietinum L. HOM05D004932 ORTHO05D005622 3.0e-75 286.2 279 53.0
Lj2g0005770 Lotus japonicus HOM05D004932 ORTHO05D005622 3.0e-75 286.2 270 56.3
Sopen07g015910 Solanum pennellii HOM05D004932 ORTHO05D005622 1.5e-74 283.9 287 54.0
Duzib150G0148 Durio zibethinus HOM05D004932 ORTHO05D005622 4.4e-74 282.3 281 55.2
CAN.G1837.4 Capsicum annuum HOM05D004932 ORTHO05D005622 5.7e-74 282.0 283 55.1
Solyc07g032250.4 Solanum lycopersicum HOM05D004932 ORTHO05D005622 5.7e-74 282.0 287 54.0
EL10Ac8g19275 Beta vulgaris HOM05D004932 ORTHO05D005622 1.3e-73 280.8 283 54.4
Dinv36742 Davidia involucrata HOM05D004932 ORTHO05D005622 1.7e-73 280.4 279 55.9
Oeu000325.1 Olea europaea HOM05D001440 ORTHO05D005622 2.2e-73 280.0 225 63.6
FvH4_1g07000 Fragaria vesca HOM05D004932 ORTHO05D005622 3.7e-73 279.3 284 53.9
FAN26G1352 Fragaria x ananassa HOM05D004932 ORTHO05D005622 8.2e-73 278.1 284 55.3
FAN26G3436 Fragaria x ananassa HOM05D004932 ORTHO05D005622 8.2e-73 278.1 284 55.3
MD15G1203900 Malus domestica HOM05D004932 ORTHO05D005622 1.1e-72 277.7 282 54.6
arahy.Tifrunner.gnm1.ann1.NAI4LE Arachis hypogaea HOM05D004932 ORTHO05D005622 1.4e-72 277.3 268 56.7
Duzib168G1170 Durio zibethinus HOM05D004932 ORTHO05D005622 1.4e-72 277.3 279 53.8
Gohir.D07G010400 Gossypium hirsutum HOM05D004932 ORTHO05D005622 2.4e-72 276.6 272 55.1
Gorai.001G010800 Gossypium raimondii HOM05D004932 ORTHO05D005622 2.4e-72 276.6 272 55.1
Lalb_Chr24g0393881 Lupinus albus HOM05D004932 ORTHO05D005622 2.4e-72 276.6 267 55.1
FAN19G2121 Fragaria x ananassa HOM05D004932 ORTHO05D005622 4.1e-72 275.8 284 54.9
arahy.Tifrunner.gnm1.ann1.RRYY0T Arachis hypogaea HOM05D004932 ORTHO05D005622 7.0e-72 275.0 270 56.3
FAN23G2709 Fragaria x ananassa HOM05D004932 ORTHO05D005622 1.2e-71 274.2 284 54.6
FAN28G1050 Fragaria x ananassa HOM05D004932 ORTHO05D005622 1.2e-71 274.2 284 54.6
PGR142G3354 Punica granatum HOM05D004932 ORTHO05D005622 1.2e-71 274.2 290 53.1
Nn6g35421 Nelumbo nucifera HOM05D004932 ORTHO05D005622 1.6e-71 273.9 279 55.9
Gohir.A07G010100 Gossypium hirsutum HOM05D004932 ORTHO05D005622 2.0e-71 273.5 272 54.4
Lj7C672T15 Lonicera japonica HOM05D004932 ORTHO05D005622 4.5e-71 272.3 273 54.9
GSVIVG01015235001 Vitis vinifera HOM05D004932 ORTHO05D005622 5.9e-71 271.9 282 54.6
MELO3C015448.2 Cucumis melo HOM05D004932 ORTHO05D005622 1.7e-70 270.4 272 55.1
Manes.14G155500 Manihot esculenta HOM05D004932 ORTHO05D005622 2.2e-70 270.0 283 52.7
Sc18g0001850 Simmondsia chinensis HOM05D004932 ORTHO05D005622 2.9e-70 269.6 257 54.9
CsaV3_1G040210 Cucumis sativus L. HOM05D004932 ORTHO05D005622 3.8e-70 269.2 278 54.7
CsaV3_UNG060480 Cucumis sativus L. HOM05D004932 ORTHO05D005622 3.8e-70 269.2 278 54.7
ECA234G2984 Erigeron canadensis HOM05D004932 ORTHO05D005622 5.0e-70 268.9 260 55.0
CiPaw.03G218800 Carya illinoinensis HOM05D004932 ORTHO05D005622 1.9e-69 266.9 283 53.4
Eucgr.C00917 Eucalyptus grandis HOM05D004932 ORTHO05D005622 1.9e-69 266.9 276 52.2
Cc06_g11080 Coffea canephora HOM05D004932 ORTHO05D005622 3.2e-69 266.2 276 54.7
TWI63G1476 Tripterygium wilfordii HOM05D004932 ORTHO05D005622 5.5e-69 265.4 277 52.3
ATR0789G094 Amborella trichopoda HOM05D004932 ORTHO05D005622 1.6e-68 263.8 277 49.5
AT4G29520 Arabidopsis thaliana HOM05D004932 ORTHO05D005622 2.7e-68 263.1 267 53.2
Aqoxy7G01262 Aquilegia oxysepala HOM05D004932 ORTHO05D005622 3.6e-68 262.7 269 52.8
Glyma.07G128200 Glycine max HOM05D004932 ORTHO05D005622 3.6e-68 262.7 267 53.2
Thecc.09G093000 Theobroma cacao HOM05D004932 ORTHO05D005622 3.6e-68 262.7 276 52.9
Sed0008469 Sechium edule HOM05D004932 ORTHO05D005622 6.1e-68 261.9 213 62.4
BraA08t33920Z Brassica rapa HOM05D004932 ORTHO05D005622 5.2e-67 258.8 268 54.5
THA.LOC104814605 Tarenaya hassleriana HOM05D004932 ORTHO05D005622 5.2e-67 258.8 284 51.4
A01p08520 Brassica napus HOM05D004932 ORTHO05D005622 6.7e-67 258.5 270 51.5
QL02p063162 Quercus lobata HOM05D004932 ORTHO05D005622 6.7e-67 258.5 281 53.7
Carub.0007s1103 Capsella rubella HOM05D004932 ORTHO05D005622 8.8e-67 258.1 282 51.4
A08p19620 Brassica napus HOM05D004932 ORTHO05D005622 1.1e-66 257.7 268 54.5
Manes.16G104000 Manihot esculenta HOM05D004932 ORTHO05D005622 2.6e-66 256.5 281 49.1
Lalb_Chr14g0375311 Lupinus albus HOM05D004932 ORTHO05D005622 4.4e-66 255.8 272 49.3
C03p89240 Brassica napus HOM05D004932 ORTHO05D005622 5.7e-66 255.4 268 54.1
Prupe.7G213500 Prunus persica HOM05D004932 ORTHO05D005622 7.5e-66 255.0 283 51.9
Atru.chr7.1544 Acer truncatum HOM05D004932 ORTHO05D005622 9.7e-66 254.6 286 50.3
Haze_25884 Corylus avellana HOM05D004932 ORTHO05D005622 9.7e-66 254.6 279 52.0
BcaC01g01175 Brassica carinata HOM05D004932 ORTHO05D005622 1.3e-65 254.2 268 54.1
C01p09950 Brassica napus HOM05D004932 ORTHO05D005622 1.3e-65 254.2 273 52.0
BolC1t00957H Brassica oleracea HOM05D004932 ORTHO05D005622 1.3e-65 254.2 273 52.0
BolC3t21234H Brassica oleracea HOM05D004932 ORTHO05D005622 1.3e-65 254.2 268 54.1
AL7G22880 Arabidopsis lyrata HOM05D004932 ORTHO05D005622 1.7e-65 253.8 282 50.0
BcaC09g51740 Brassica carinata HOM05D004932 ORTHO05D005622 2.2e-65 253.4 286 51.0
CSS0009775 Camellia sinensis var. sinensis HOM05D004932 ORTHO05D005622 3.1e-64 249.6 258 54.7
Thhalv10025804m.g Eutrema salsugineum HOM05D004932 ORTHO05D005622 7.0e-64 248.4 271 47.6
PSO210G2479 Papaver somniferum HOM05D004932 ORTHO05D005622 1.2e-63 247.7 282 50.7
BraA01t00801Z Brassica rapa HOM05D004932 ORTHO05D005622 1.6e-63 247.3 278 48.6
ClCG03G015800 Citrullus lanatus HOM05D004932 ORTHO05D005622 1.6e-63 247.3 272 51.1
MD02G1074400 Malus domestica HOM05D004932 ORTHO05D005622 2.0e-63 246.9 281 52.3
PSO210G4737 Papaver somniferum HOM05D004932 ORTHO05D005622 7.7e-63 245.0 282 50.0
VMungo0464G1844 Vigna mungo HOM05D004932 ORTHO05D005622 7.7e-63 245.0 273 49.5
COL.COLO4_18228 Corchorus olitorius HOM05D004932 ORTHO05D005622 2.2e-62 243.4 279 50.2
TPR.G35493 Trifolium pratense HOM05D004932 ORTHO05D005622 3.8e-62 242.7 275 49.1
HPP92_004560 Vanilla planifolia HOM05D004932 ORTHO05D005622 3.8e-62 242.7 270 51.1
Lsat_1_v5_gn_5_145840 Lactuca sativa HOM05D004932 ORTHO05D005622 6.5e-62 241.9 284 50.4
Psat1g049760 Pisum sativum HOM05D004932 ORTHO05D005622 6.5e-62 241.9 262 52.3
CDE05G0556 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 1.5e-61 240.7 279 49.1
vmacro06275 Vaccinium macrocarpon HOM05D004932 ORTHO05D005622 1.5e-61 240.7 289 48.1
Os06g0150400 Oryza sativa ssp. japonica HOM05D004932 ORTHO05D005622 1.9e-61 240.4 259 51.7
Migut.K00580 Erythranthe guttata HOM05D004932 ORTHO05D005622 3.2e-61 239.6 289 49.5
HanXRQChr10g0319131 Helianthus annuus HOM05D004932 ORTHO05D005622 3.2e-61 239.6 287 49.1
BcaB03g12610 Brassica carinata HOM05D004932 ORTHO05D005622 4.2e-61 239.2 255 53.3
SGA_v2.0_scaffold10G05207 Striga asiatica HOM05D004932 ORTHO05D005622 4.2e-61 239.2 339 44.2
Glyma.01G003700 Glycine max HOM05D004932 ORTHO05D005622 5.5e-61 238.8 281 47.7
RcHm_v2.0_Chr2g0092951 Rosa chinensis HOM05D004932 ORTHO05D005622 6.1e-60 235.3 283 48.1
AUR62031253 Chenopodium quinoa HOM05D004932 ORTHO05D005622 8.0e-60 235.0 280 45.7
Phvul.004G172100 Phaseolus vulgaris HOM05D004932 ORTHO05D005622 8.0e-60 235.0 278 47.1
Potri.018G067300 Populus trichocarpa HOM05D004932 ORTHO05D005622 1.8e-59 233.8 266 48.9
Zm00001eb376850 Zea mays HOM05D004932 ORTHO05D005622 3.0e-59 233.0 281 45.2
AUR62027447 Chenopodium quinoa HOM05D004932 ORTHO05D005622 5.2e-59 232.3 280 45.7
Sp7g27380 Schrenkiella parvula HOM05D004932 ORTHO05D005622 6.8e-59 231.9 273 48.4
Ah.09g228480 Amaranthus hybridus HOM05D004932 ORTHO05D005622 8.8e-59 231.5 271 46.1
Sabra18G0059800 Salix brachista HOM05D004932 ORTHO05D005622 1.2e-58 231.1 266 49.2
CDE05G1139 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 2.0e-58 230.3 259 50.6
DCAR_011989 Daucus carota HOM05D004932 ORTHO05D005622 1.3e-57 227.6 268 49.6
Peaxi162Scf00444g00617 Petunia axillaris HOM05D004932 ORTHO05D005622 2.2e-57 226.9 276 45.7
CARHR237350 Cardamine hirsuta HOM05D004932 ORTHO05D005622 2.4e-56 223.4 286 46.2
TAR365G0154 Trochodendron aralioides HOM05D004932 ORTHO05D005622 3.1e-56 223.0 222 52.3
arahy.Tifrunner.gnm1.ann1.E8KE86 Arachis hypogaea HOM05D004932 ORTHO05D005622 1.2e-55 221.1 269 49.1
arahy.Tifrunner.gnm1.ann1.XF40UC Arachis hypogaea HOM05D004932 ORTHO05D005622 1.2e-55 221.1 276 48.6
SEGI_24488 Sequoiadendron giganteum HOM05D004932 ORTHO05D005622 2.7e-55 219.9 198 53.5
Rhsim03G0234400 Rhododendron simsii HOM05D004932 ORTHO05D005622 5.9e-55 218.8 286 46.5
Ciclev10009015m.g Citrus clementina HOM05D004932 ORTHO05D005622 1.3e-54 217.6 190 58.4
Cpa.g.sc7.248 Carica papaya HOM05D004932 ORTHO05D005622 1.1e-53 214.5 276 44.2
unitig_26.g9168 Utricularia gibba HOM05D004932 ORTHO05D005622 1.6e-52 210.7 125 83.2
Aa31LG2G20960 Aethionema arabicum HOM05D004932 ORTHO05D005622 1.4e-51 207.6 192 54.2
Medtr6g092150 Medicago truncatula HOM05D004932 ORTHO05D005622 1.4e-51 207.6 220 50.9
Mapoly0075s0048 Marchantia polymorpha HOM05D004932 ORTHO05D005622 2.3e-51 206.8 285 43.2
Pp3c4_19450 Physcomitrium patens HOM05D004932 ORTHO05D005622 7.0e-48 195.3 213 48.8
HanXRQChr12g0355371 Helianthus annuus HOM05D004932 ORTHO05D005622 6.8e-43 178.7 265 43.0
SHI02816 Sapria himalayana HOM05D004932 ORTHO05D005622 7.5e-42 175.3 223 44.8
Cfa003116 Carpinus fangiana HOM05D004932 ORTHO05D005622 3.2e-40 169.9 209 47.8
AagrBONN_evm.TU.Sc2ySwM_362.2022 Anthoceros agrestis HOM05D004932 ORTHO05D005622 9.2e-40 168.3 201 47.3
arahy.Tifrunner.gnm1.ann1.GR1INA Arachis hypogaea HOM05D004932 ORTHO05D005622 2.3e-35 153.7 169 49.1
SMO361G0136 Selaginella moellendorffii HOM05D004932 ORTHO05D005622 2.2e-33 147.1 195 39.5
CBR_g8029 Chara braunii HOM05D004932 ORTHO05D005622 5.6e-29 132.5 189 37.6
Oeu037599.1 Olea europaea HOM05D004932 ORTHO05D005622 1.5e-26 124.4 280 35.7
unitig_26.g9167 Utricularia gibba HOM05D004932 ORTHO05D005622 5.8e-26 122.5 140 55.7
Cc06_g18040 Coffea canephora HOM05D004932 ORTHO05D005622 1.7e-25 120.9 126 50.0
arahy.Tifrunner.gnm1.ann1.Y4MEFZ Arachis hypogaea HOM05D004932 ORTHO05D005622 1.1e-21 108.2 109 53.2
Hma1.2p1_0798F.1_g219570 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 2.2e-17 94.0 112 47.3
Hma1.2p1_1074F.1_g254276 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 2.2e-17 94.0 112 47.3
PRCOL_00005979 Prasinoderma coloniale HOM05D004932 ORTHO05D005622 1.4e-16 91.3 215 29.3
RcHm_v2.0_Chr5g0016971 Rosa chinensis HOM05D004932 ORTHO05D005622 2.4e-16 90.5 64 68.8
RcHm_v2.0_Chr4g0402141 Rosa chinensis HOM05D004932 ORTHO05D005622 3.2e-16 90.1 68 66.2
CARHR109770 Cardamine hirsuta HOM05D004932 ORTHO05D005622 7.8e-15 85.5 96 50.0
Hma1.2p1_1586F.1_g292210 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 8.6e-14 82.0 79 54.4
MCO04G519 Micromonas commoda HOM05D004932 ORTHO05D005622 3.3e-13 80.1 205 30.2
Cre03.g151700 Chlamydomonas reinhardtii HOM05D004932 ORTHO05D005622 7.3e-13 79.0 214 28.5
Nn3g21874 Nelumbo nucifera HOM05D004932 ORTHO05D005622 2.8e-12 77.0 47 70.2
Nn2g13205 Nelumbo nucifera HOM05D004932 ORTHO05D005622 3.6e-12 76.6 52 67.3
Medtr6g077350 Medicago truncatula HOM05D004932 ORTHO05D005622 5.2e-11 72.8 49 67.3
CiPaw.05G072200 Carya illinoinensis HOM05D004932 ORTHO05D005622 2.0e-10 70.9 50 66.0
Oeu037598.1 Olea europaea HOM05D004932 ORTHO05D005622 5.8e-10 69.3 95 50.5
arahy.Tifrunner.gnm1.ann1.XYZ5FS Arachis hypogaea HOM05D004932 ORTHO05D005622 2.2e-09 67.4 72 44.4
TAR636G2165 Trochodendron aralioides HOM05D004932 ORTHO05D005622 1.1e-08 65.1 53 54.7
arahy.Tifrunner.gnm1.ann1.P1T2M1 Arachis hypogaea HOM05D000368 ORTHO05D000289 7.8e-07 58.9 49 53.1


User provided reference genes

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