Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g14354 Utricularia gibba HOM05D007144 ORTHO05D008709 2.5e-82 308.9 177 100.0
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 3.4e-23 112.5 210 39.5
HPP92_013978 Vanilla planifolia HOM05D007144 ORTHO05D008709 2.1e-17 93.2 102 50.0
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 1.1e-16 90.9 177 38.4
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 5.3e-16 88.6 103 50.5
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.2e-15 87.4 156 39.1
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 2.0e-15 86.7 178 42.7
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 2.6e-15 86.3 62 64.5
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 1.3e-14 84.0 112 45.5
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 2.9e-14 82.8 81 54.3
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 2.9e-14 82.8 92 50.0
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 2.9e-14 82.8 92 50.0
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 6.5e-14 81.6 56 69.6
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 6.5e-14 81.6 75 57.3
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 1.4e-13 80.5 88 50.0
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 4.2e-13 79.0 75 54.7
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 4.2e-13 79.0 88 51.1
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 9.3e-13 77.8 88 48.9
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 1.2e-12 77.4 49 73.5
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 1.6e-12 77.0 90 47.8
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 2.7e-12 76.3 47 76.6
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 2.7e-12 76.3 81 53.1
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 2.7e-12 76.3 81 53.1
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 3.5e-12 75.9 88 44.3
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 3.5e-12 75.9 99 45.5
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 3.5e-12 75.9 56 57.1
CBR_g48945 Chara braunii HOM05D007144 ORTHO05D008709 4.6e-12 75.5 79 51.9
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 6.1e-12 75.1 79 50.6
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 7.9e-12 74.7 85 48.2
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 1.3e-11 73.9 86 48.8
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 1.3e-11 73.9 52 67.3
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 1.8e-11 73.6 47 70.2
Atru.chr4.1901 Acer truncatum HOM05D007144 ORTHO05D008709 2.3e-11 73.2 100 45.0
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 2.3e-11 73.2 233 28.3
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 2.3e-11 73.2 178 41.0
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 3.0e-11 72.8 47 70.2
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 3.9e-11 72.4 46 69.6
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 3.9e-11 72.4 72 55.6
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 5.1e-11 72.0 46 73.9
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 5.1e-11 72.0 48 64.6
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 6.7e-11 71.6 47 68.1
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 8.7e-11 71.2 45 71.1
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 8.7e-11 71.2 48 64.6
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 8.7e-11 71.2 77 49.4
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 8.7e-11 71.2 77 49.4
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 8.7e-11 71.2 46 71.7
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 8.7e-11 71.2 137 44.5
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 1.1e-10 70.9 81 48.1
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 1.1e-10 70.9 87 49.4
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 1.1e-10 70.9 137 44.5
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 1.1e-10 70.9 46 67.4
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 1.5e-10 70.5 73 50.7
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 1.5e-10 70.5 83 48.2
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 2.5e-10 69.7 48 64.6
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 2.5e-10 69.7 48 64.6
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 2.5e-10 69.7 48 64.6
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 2.5e-10 69.7 48 64.6
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 2.5e-10 69.7 84 48.8
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 2.5e-10 69.7 137 43.8
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 2.5e-10 69.7 137 43.8
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 2.5e-10 69.7 81 49.4
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 4.3e-10 68.9 47 66.0
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 4.3e-10 68.9 54 61.1
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 4.3e-10 68.9 137 43.8
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 4.3e-10 68.9 87 47.1
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 5.7e-10 68.6 47 70.2
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 7.4e-10 68.2 137 43.1
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 7.4e-10 68.2 47 66.0
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 1.3e-09 67.4 54 55.6
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 1.3e-09 67.4 48 60.4
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 1.3e-09 67.4 83 48.2
AUR62000186 Chenopodium quinoa HOM05D007144 ORTHO05D008709 1.3e-09 67.4 51 58.8
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 3.7e-09 65.9 83 41.0
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 4.8e-09 65.5 77 48.1
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 6.3e-09 65.1 150 37.3
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 6.3e-09 65.1 68 50.0
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 6.3e-09 65.1 81 43.2
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 6.3e-09 65.1 80 47.5
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 6.3e-09 65.1 46 58.7
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 6.3e-09 65.1 48 58.3
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 8.2e-09 64.7 66 54.5
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 1.1e-08 64.3 88 40.9
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 1.1e-08 64.3 74 51.4
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 1.1e-08 64.3 68 51.5
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 1.8e-08 63.5 80 46.2
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 2.4e-08 63.2 71 47.9
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 2.4e-08 63.2 38 78.9
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 3.1e-08 62.8 48 60.4
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 4.1e-08 62.4 45 64.4
ClCG02G022890 Citrullus lanatus HOM05D007144 ORTHO05D008709 5.3e-08 62.0 103 39.8
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 6.9e-08 61.6 81 44.4
Mapoly0026s0092 Marchantia polymorpha HOM05D007144 ORTHO05D008709 1.2e-07 60.8 41 68.3
SMO164G0043 Selaginella moellendorffii HOM05D007144 ORTHO05D008709 2.0e-07 60.1 58 53.4
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 5.9e-07 58.5 81 45.7
Cre12.g484500 Chlamydomonas reinhardtii HOM05D007144 ORTHO05D008709 5.9e-07 58.5 54 57.4
Phvul.006G021300 Phaseolus vulgaris HOM05D007144 ORTHO05D008709 7.7e-07 58.2 41 61.0
Hma1.2p1_0842F.1_g227160 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 1.0e-06 57.8 95 42.1
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 2.9e-06 56.2 37 70.3
FAN03G0004 Fragaria x ananassa HOM05D000020 ORTHO05D001879 2.9e-06 56.2 54 51.9
FAN10G4031 Fragaria x ananassa HOM05D001964 ORTHO05D001879 2.9e-06 56.2 54 51.9
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 6.5e-06 55.1 60 46.7


User provided reference genes

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