Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 9.7e-228 793.1 395 100.0
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 2.8e-102 376.3 350 59.7
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 2.8e-102 376.3 466 48.3
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 6.8e-96 355.1 472 45.8
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 1.2e-95 354.4 379 52.2
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 1.7e-94 350.5 464 47.8
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 7.2e-90 335.1 460 43.7
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 4.7e-89 332.4 472 43.9
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 4.0e-88 329.3 458 45.4
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 1.3e-86 324.3 467 42.4
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 1.1e-85 321.2 455 42.9
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 1.1e-85 321.2 453 43.5
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 2.4e-85 320.1 438 46.1
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 3.1e-85 319.7 477 43.6
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 1.3e-83 314.3 473 43.3
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 1.5e-82 310.8 445 44.9
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.9e-82 310.5 460 43.3
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 1.9e-82 310.5 493 41.6
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 7.3e-82 308.5 472 42.4
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 9.5e-82 308.1 435 45.7
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 9.5e-82 308.1 460 42.8
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 1.6e-81 307.4 424 44.8
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 3.6e-81 306.2 506 41.3
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 6.1e-81 305.4 451 43.2
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 8.0e-81 305.1 477 42.1
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 1.0e-80 304.7 356 49.7
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 1.4e-80 304.3 502 39.8
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 3.1e-80 303.1 461 43.2
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 5.2e-80 302.4 439 44.0
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 8.9e-80 301.6 473 41.0
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 2.0e-79 300.4 461 43.4
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 2.6e-79 300.1 513 40.9
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 5.8e-79 298.9 461 41.9
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 7.5e-79 298.5 460 42.0
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 9.8e-79 298.1 436 42.2
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 1.3e-78 297.7 458 43.0
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 1.3e-78 297.7 502 39.2
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 1.7e-78 297.4 461 43.6
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 2.2e-78 297.0 462 43.1
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 2.2e-78 297.0 514 40.5
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 2.9e-78 296.6 462 42.4
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 1.1e-77 294.7 486 42.2
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.4e-77 294.3 462 42.0
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 1.4e-77 294.3 501 40.3
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 2.4e-77 293.5 464 39.7
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 7.0e-77 292.0 438 40.6
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 7.0e-77 292.0 500 38.8
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 7.0e-77 292.0 501 39.3
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 7.0e-77 292.0 501 39.1
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 3.5e-76 289.7 447 41.2
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 1.3e-75 287.7 473 39.5
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 1.3e-75 287.7 452 39.4
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 1.7e-75 287.3 513 39.0
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 3.0e-75 286.6 453 42.6
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 3.9e-75 286.2 498 39.0
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 6.6e-75 285.4 452 42.3
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 6.6e-75 285.4 470 40.9
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 1.1e-74 284.6 472 40.7
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 1.5e-74 284.3 466 41.8
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 1.9e-74 283.9 453 42.4
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 2.5e-74 283.5 471 42.5
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 5.6e-74 282.3 501 39.9
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 9.5e-74 281.6 405 44.9
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 4.7e-73 279.3 431 40.8
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 1.1e-72 278.1 433 41.3
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.1e-72 278.1 453 41.7
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 1.4e-72 277.7 436 42.0
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 1.8e-72 277.3 445 42.2
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 2.3e-72 276.9 437 42.6
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.0e-71 273.9 498 39.0
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 5.8e-71 272.3 440 42.5
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 9.8e-71 271.6 438 42.2
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 9.8e-71 271.6 432 41.4
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 1.3e-70 271.2 467 39.0
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 1.3e-70 271.2 437 40.3
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 1.7e-70 270.8 431 42.2
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 1.7e-70 270.8 405 42.2
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 3.7e-70 269.6 481 38.5
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 4.9e-70 269.2 471 38.6
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 1.4e-69 267.7 521 37.2
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 4.1e-69 266.2 422 39.8
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 1.2e-68 264.6 463 38.7
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 1.6e-68 264.2 212 64.2
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 2.1e-68 263.8 437 39.6
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 4.6e-68 262.7 482 36.7
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 6.0e-68 262.3 445 39.8
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 1.3e-67 261.2 204 64.2
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 3.4e-63 246.5 209 60.8
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 7.5e-63 245.4 200 65.0
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 1.1e-61 241.5 462 38.3
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 3.9e-59 233.0 169 68.0
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 5.1e-59 232.6 208 58.2
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 1.1e-50 204.9 169 60.4
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 2.4e-48 197.2 377 38.2
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 2.6e-47 193.7 427 36.1
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 1.6e-44 184.5 373 36.2
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 7.8e-44 182.2 123 71.5
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 8.7e-43 178.7 164 59.8
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 4.3e-42 176.4 196 45.4
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 9.6e-42 175.3 338 36.1
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 1.3e-41 174.9 398 33.2
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 9.0e-40 168.7 178 47.2
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.5e-39 167.9 123 67.5
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 3.3e-34 150.2 171 43.9
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 2.8e-33 147.1 171 45.0
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 1.5e-31 141.4 401 28.9
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 4.9e-30 136.3 335 33.4
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 9.6e-26 122.1 91 62.6
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 3.1e-24 117.1 89 65.2
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 5.3e-24 116.3 70 77.1
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 1.5e-15 88.2 114 45.6
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 1.5e-15 88.2 299 28.4
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 1.4e-13 81.6 45 82.2
TPR.G46 Trifolium pratense HOM05D006388 ORTHO05D008026 9.4e-13 79.0 87 49.4
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 1.8e-11 74.7 82 52.4
Zm00001eb050690 Zea mays HOM05D006388 ORTHO05D008026 4.3e-10 70.1 46 73.9
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 5.7e-10 69.7 54 61.1
Cre02.g083400 Chlamydomonas reinhardtii HOM05D006388 ORTHO05D008026 2.2e-09 67.8 173 31.2
Zm00001eb135490 Zea mays HOM05D006388 ORTHO05D008026 3.4e-07 60.5 39 76.9
PGR044G2638 Punica granatum HOM05D006388 ORTHO05D008026 7.7e-07 59.3 98 44.9


User provided reference genes

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