Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 7.7e-94 347.1 166 100.0
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 2.4e-50 202.6 120 80.0
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 9.0e-50 200.7 119 79.0
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.0e-49 199.5 119 78.2
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 2.6e-49 199.1 119 78.2
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 2.6e-49 199.1 119 79.0
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 2.2e-48 196.1 119 77.3
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 2.2e-48 196.1 119 77.3
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.2e-48 196.1 119 78.2
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 2.9e-48 195.7 119 76.5
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 3.8e-48 195.3 119 76.5
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 3.8e-48 195.3 119 77.3
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 6.4e-48 194.5 126 72.2
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 1.1e-47 193.7 119 75.6
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 1.1e-47 193.7 119 76.5
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 1.4e-47 193.4 119 77.3
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 2.4e-47 192.6 131 71.8
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 2.4e-47 192.6 118 74.6
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 3.2e-47 192.2 120 74.2
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 4.2e-47 191.8 119 75.6
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 5.4e-47 191.4 119 76.5
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 5.4e-47 191.4 119 74.8
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 9.3e-47 190.7 119 76.5
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 9.3e-47 190.7 119 77.3
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 1.2e-46 190.3 119 74.8
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 1.2e-46 190.3 120 74.2
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 1.6e-46 189.9 119 75.6
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 1.6e-46 189.9 117 77.8
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 2.1e-46 189.5 119 74.8
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 3.5e-46 188.7 120 74.2
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 4.6e-46 188.3 119 74.8
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 4.6e-46 188.3 120 74.2
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 4.6e-46 188.3 119 74.8
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 6.0e-46 188.0 120 73.3
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 7.8e-46 187.6 120 76.7
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 7.8e-46 187.6 119 74.8
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 1.0e-45 187.2 119 74.8
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 1.0e-45 187.2 119 73.9
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 1.3e-45 186.8 120 73.3
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 1.3e-45 186.8 120 73.3
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 2.3e-45 186.0 119 73.1
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 2.3e-45 186.0 120 75.0
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 2.3e-45 186.0 122 75.4
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 3.0e-45 185.7 119 74.8
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 6.6e-45 184.5 122 74.6
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 6.6e-45 184.5 119 73.1
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 8.7e-45 184.1 119 72.3
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 1.9e-44 183.0 119 76.5
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 1.9e-44 183.0 119 72.3
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 3.3e-44 182.2 119 69.7
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 4.3e-44 181.8 117 72.6
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 7.3e-44 181.0 119 72.3
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 7.3e-44 181.0 117 71.8
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 1.3e-43 180.3 120 74.2
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.6e-43 178.7 121 72.7
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.6e-43 178.7 121 72.7
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.6e-43 178.7 121 72.7
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 1.1e-42 177.2 121 71.9
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 1.8e-42 176.4 121 71.9
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 1.8e-42 176.4 119 68.9
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 2.4e-42 176.0 124 66.9
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 6.9e-42 174.5 117 70.1
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 6.9e-42 174.5 117 70.1
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 1.2e-41 173.7 124 65.3
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 2.2e-40 169.5 116 68.1
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 2.2e-40 169.5 116 68.1
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 2.2e-40 169.5 116 68.1
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 2.2e-40 169.5 116 68.1
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 2.9e-40 169.1 116 68.1
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 2.9e-40 169.1 116 68.1
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 2.9e-40 169.1 116 68.1
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 2.9e-40 169.1 117 66.7
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 3.8e-40 168.7 115 68.7
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 1.1e-39 167.2 116 67.2
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 1.1e-39 167.2 116 67.2
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 1.1e-39 167.2 116 67.2
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 1.4e-39 166.8 116 67.2
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 1.4e-39 166.8 116 67.2
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.9e-39 166.4 116 66.4
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 3.2e-39 165.6 116 66.4
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 9.3e-39 164.1 116 66.4
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 2.1e-38 162.9 116 66.4
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 2.7e-38 162.5 130 64.6
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 3.0e-37 159.1 115 66.1
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 3.3e-36 155.6 81 84.0
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 4.3e-36 155.2 118 65.3
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 9.6e-36 154.1 83 88.0
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 2.8e-35 152.5 77 87.0
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 2.8e-35 152.5 81 84.0
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 2.8e-35 152.5 81 82.7
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 4.8e-35 151.8 81 82.7
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 4.8e-35 151.8 82 84.1
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 2.4e-34 149.4 81 82.7
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 4.0e-34 148.7 117 59.0
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 1.5e-33 146.7 81 79.0
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 2.0e-33 146.4 75 84.0
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 2.6e-33 146.0 81 79.0
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 7.6e-33 144.4 73 89.0
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 4.9e-32 141.7 114 57.9
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 3.2e-31 139.0 80 77.5
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 5.5e-31 138.3 86 73.3
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 5.5e-31 138.3 75 81.3
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 2.1e-30 136.3 91 71.4
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 2.1e-30 136.3 91 71.4
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 2.1e-30 136.3 80 76.2
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 2.1e-30 136.3 86 72.1
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 4.6e-30 135.2 98 67.3
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 5.1e-29 131.7 100 63.0
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 6.7e-29 131.3 86 68.6
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.1e-28 130.6 101 61.4
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 9.6e-28 127.5 115 57.4
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 9.6e-28 127.5 115 57.4
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 1.4e-26 123.6 67 79.1
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 1.5e-25 120.2 84 66.7
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 5.0e-24 115.2 96 58.3
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 8.7e-21 104.4 57 82.5
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 1.1e-18 97.4 117 51.3
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 1.8e-18 96.7 65 69.2
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 1.7e-16 90.1 113 43.4
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 4.6e-14 82.0 128 37.5
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 6.1e-14 81.6 110 41.8
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 5.1e-13 78.6 146 37.7
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 5.3e-10 68.6 33 93.9
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 3.4e-09 65.9 30 90.0
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 1.4e-07 60.5 31 87.1
unitig_75.g29315 Utricularia gibba HOM05D006449 ORTHO05D007995 1.2e-06 57.4 25 100.0


User provided reference genes

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