Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g14175 Utricularia gibba HOM05D003987 ORTHO05D004532 9.3e-287 989.6 518 100.0
unitig_26.g9099 Utricularia gibba HOM05D003987 ORTHO05D004532 3.4e-103 379.8 311 69.1
SalBow3G0011 Salvia bowleyana HOM05D003987 ORTHO05D004532 1.2e-97 361.3 527 47.4
Migut.J00243 Erythranthe guttata HOM05D003987 ORTHO05D004532 1.8e-93 347.4 527 46.1
SGA_v2.0_scaffold75G24988 Striga asiatica HOM05D003987 ORTHO05D004532 1.5e-79 301.2 522 43.1
Oeu018344.1 Olea europaea HOM05D003987 ORTHO05D004532 6.4e-78 295.8 540 42.8
Lj2A83T77 Lonicera japonica HOM05D003987 ORTHO05D004532 3.5e-76 290.0 541 41.6
Actinidia05340 Actinidia chinensis HOM05D003987 ORTHO05D004532 7.3e-74 282.3 527 40.4
CSS0027188 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 2.4e-72 277.3 535 40.0
CSS0029662 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 1.5e-71 274.6 529 41.2
Migut.L01985 Erythranthe guttata HOM05D003987 ORTHO05D004532 7.6e-71 272.3 464 42.9
Peaxi162Scf01302g00045 Petunia axillaris HOM05D003987 ORTHO05D004532 3.8e-70 270.0 539 39.0
PGSC0003DMG400019132 Solanum tuberosum HOM05D003987 ORTHO05D004532 4.1e-69 266.5 530 40.2
Dinv37095 Davidia involucrata HOM05D003987 ORTHO05D004532 8.7e-67 258.8 521 38.6
PGSC0003DMG400020336 Solanum tuberosum HOM05D003987 ORTHO05D004532 1.1e-66 258.5 527 38.1
Nitab4.5_0000119g0280 Nicotiana tabacum HOM05D003987 ORTHO05D004532 1.9e-66 257.7 520 39.4
Nitab4.5_0017865g0010 Nicotiana tabacum HOM05D003987 ORTHO05D004532 4.3e-66 256.5 522 39.8
Sopen09g006640 Solanum pennellii HOM05D003987 ORTHO05D004532 4.3e-66 256.5 523 37.9
Oeu009906.1 Olea europaea HOM05D003987 ORTHO05D004532 7.3e-66 255.8 531 39.5
CSS0016809 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 2.8e-65 253.8 450 41.8
Oeu044376.1 Olea europaea HOM05D003987 ORTHO05D004532 7.6e-63 245.7 438 42.0
GSVIVG01034033001 Vitis vinifera HOM05D003987 ORTHO05D004532 1.3e-62 245.0 525 37.9
DCAR_028789 Daucus carota HOM05D003987 ORTHO05D004532 1.7e-62 244.6 534 37.5
Hma1.2p1_0244F.1_g101070 Hydrangea macrophylla HOM05D003987 ORTHO05D004532 2.9e-62 243.8 520 38.7
Cc06_g01840 Coffea canephora HOM05D003987 ORTHO05D004532 1.4e-61 241.5 538 38.7
ClCG10G021770 Citrullus lanatus HOM05D003987 ORTHO05D004532 1.9e-61 241.1 537 36.5
Lj3g0003026 Lotus japonicus HOM05D003987 ORTHO05D004532 9.3e-61 238.8 523 37.5
CsaV3_3G034330 Cucumis sativus L. HOM05D003987 ORTHO05D004532 1.6e-60 238.0 521 36.7
Glyma.07G142800 Glycine max HOM05D003987 ORTHO05D004532 3.5e-60 236.9 514 36.6
MELO3C009204.2 Cucumis melo HOM05D003987 ORTHO05D004532 1.0e-59 235.3 528 36.7
Glyma.18G193700 Glycine max HOM05D003987 ORTHO05D004532 1.3e-59 235.0 521 35.9
Duzib128G2001 Durio zibethinus HOM05D003987 ORTHO05D004532 5.1e-59 233.0 532 37.4
Ciclev10011513m.g Citrus clementina HOM05D003987 ORTHO05D004532 8.7e-59 232.3 527 36.6
Duzib093G0208 Durio zibethinus HOM05D003987 ORTHO05D004532 5.6e-58 229.6 517 36.9
Dinv35526 Davidia involucrata HOM05D003987 ORTHO05D004532 7.3e-58 229.2 521 37.6
Gohir.A01G224300 Gossypium hirsutum HOM05D003987 ORTHO05D004532 7.3e-58 229.2 536 34.0
Nn2g13566 Nelumbo nucifera HOM05D003987 ORTHO05D004532 9.6e-58 228.8 532 36.8
Thecc.05G024900 Theobroma cacao HOM05D003987 ORTHO05D004532 2.1e-57 227.6 537 36.5
TWI77G0200 Tripterygium wilfordii HOM05D003987 ORTHO05D004532 2.1e-57 227.6 529 35.5
Lj1g0003107 Lotus japonicus HOM05D003987 ORTHO05D004532 2.8e-57 227.3 522 36.6
Peaxi162Scf00014g00921 Petunia axillaris HOM05D003987 ORTHO05D004532 3.6e-57 226.9 523 37.3
Potri.006G094600 Populus trichocarpa HOM05D003987 ORTHO05D004532 6.2e-57 226.1 543 34.6
Prupe.6G268000 Prunus persica HOM05D003987 ORTHO05D004532 6.2e-57 226.1 523 35.6
Phvul.008G111900 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 8.1e-57 225.7 526 35.4
VMungo1383G2510 Vigna mungo HOM05D003987 ORTHO05D004532 1.1e-56 225.3 513 35.7
Gorai.002G259700 Gossypium raimondii HOM05D003987 ORTHO05D004532 1.4e-56 224.9 536 33.8
Gorai.012G110200 Gossypium raimondii HOM05D003987 ORTHO05D004532 2.4e-56 224.2 524 34.7
COL.COLO4_14650 Corchorus olitorius HOM05D003987 ORTHO05D004532 4.0e-56 223.4 534 36.3
Cfa017278 Carpinus fangiana HOM05D003987 ORTHO05D004532 1.2e-55 221.9 529 37.2
Gohir.D04G127200 Gossypium hirsutum HOM05D003987 ORTHO05D004532 1.5e-55 221.5 526 35.2
Potri.016G109100 Populus trichocarpa HOM05D003987 ORTHO05D004532 7.6e-55 219.2 537 35.6
Gohir.A04G086900 Gossypium hirsutum HOM05D003987 ORTHO05D004532 1.3e-54 218.4 524 35.3
Haze_20924 Corylus avellana HOM05D003987 ORTHO05D004532 2.2e-54 217.6 529 36.7
Atru.chr8.2120 Acer truncatum HOM05D003987 ORTHO05D004532 3.8e-54 216.9 534 35.0
Manes.09G100200 Manihot esculenta HOM05D003987 ORTHO05D004532 3.8e-54 216.9 446 37.7
Cpa.g.sc56.87 Carica papaya HOM05D003987 ORTHO05D004532 1.1e-53 215.3 525 34.9
Sabra06G0072400 Salix brachista HOM05D003987 ORTHO05D004532 1.4e-53 214.9 535 35.0
Lsat_1_v5_gn_9_33201 Lactuca sativa HOM05D003987 ORTHO05D004532 1.2e-52 211.8 523 35.8
vmacro08611 Vaccinium macrocarpon HOM05D003987 ORTHO05D004532 1.2e-52 211.8 526 36.1
MD12G1157700 Malus domestica HOM05D003987 ORTHO05D004532 1.6e-52 211.5 516 37.0
Nitab4.5_0000008g0400 Nicotiana tabacum HOM05D003987 ORTHO05D004532 3.0e-51 207.2 553 33.8
PSO339G5295 Papaver somniferum HOM05D003987 ORTHO05D004532 5.1e-51 206.5 534 33.9
Hund08928 Selenicereus undatus HOM05D003987 ORTHO05D004532 8.7e-51 205.7 525 34.3
MD04G1143500 Malus domestica HOM05D003987 ORTHO05D004532 1.1e-50 205.3 515 36.1
PGR031G1271 Punica granatum HOM05D003987 ORTHO05D004532 5.6e-50 203.0 532 34.8
AUR62025345 Chenopodium quinoa HOM05D003987 ORTHO05D004532 7.4e-50 202.6 531 36.0
EL10Ac8g18936 Beta vulgaris HOM05D003987 ORTHO05D004532 2.1e-49 201.1 545 34.5
Medtr4g019040 Medicago truncatula HOM05D003987 ORTHO05D004532 2.1e-49 201.1 529 33.8
CANSAT78G1629 Cannabis sativa HOM05D003987 ORTHO05D004532 4.8e-49 199.9 524 34.0
MSTRG.19041 Avicennia marina HOM05D003987 ORTHO05D004532 6.2e-49 199.5 377 41.9
Aqoxy1G00765 Aquilegia oxysepala HOM05D003987 ORTHO05D004532 4.0e-48 196.8 529 33.6
PSO384G1037 Papaver somniferum HOM05D003987 ORTHO05D004532 6.9e-48 196.1 536 33.8
RcHm_v2.0_Chr3g0464181 Rosa chinensis HOM05D003987 ORTHO05D004532 6.9e-48 196.1 545 33.4
Sc22g0004580 Simmondsia chinensis HOM05D003987 ORTHO05D004532 6.9e-48 196.1 462 35.9
QL07p027561 Quercus lobata HOM05D003987 ORTHO05D004532 3.4e-47 193.7 488 36.1
TAR633G1447 Trochodendron aralioides HOM05D003987 ORTHO05D004532 3.4e-47 193.7 545 34.5
arahy.Tifrunner.gnm1.ann1.S0ZXK0 Arachis hypogaea HOM05D003987 ORTHO05D004532 9.9e-47 192.2 523 33.7
arahy.Tifrunner.gnm1.ann1.B3S732 Arachis hypogaea HOM05D003987 ORTHO05D004532 1.7e-46 191.4 525 33.3
Sed0025444 Sechium edule HOM05D003987 ORTHO05D004532 1.7e-46 191.4 447 34.2
MBI14_g28607_MAGBIO Magnolia biondii HOM05D003987 ORTHO05D004532 8.4e-46 189.1 511 34.2
AUR62028348 Chenopodium quinoa HOM05D003987 ORTHO05D004532 1.1e-45 188.7 530 34.0
Sopen10g036150 Solanum pennellii HOM05D003987 ORTHO05D004532 1.4e-45 188.3 518 34.0
Psat7g242560 Pisum sativum HOM05D003987 ORTHO05D004532 1.9e-45 188.0 534 31.6
THA.LOC104805691 Tarenaya hassleriana HOM05D003987 ORTHO05D004532 3.2e-45 187.2 457 35.9
HanXRQChr01g0001271 Helianthus annuus HOM05D003987 ORTHO05D004532 1.2e-44 185.3 520 34.8
Aa31LG10G8760 Aethionema arabicum HOM05D003987 ORTHO05D004532 2.1e-44 184.5 480 33.1
AL5G35070 Arabidopsis lyrata HOM05D003987 ORTHO05D004532 3.0e-43 180.6 517 32.5
Lalb_Chr19g0124881 Lupinus albus HOM05D003987 ORTHO05D004532 5.1e-43 179.9 469 34.3
Lalb_Chr01g0022851 Lupinus albus HOM05D003987 ORTHO05D004532 1.5e-42 178.3 519 33.3
Ca_20115_v3 Cicer arietinum L. HOM05D003987 ORTHO05D004532 2.5e-42 177.6 481 32.4
DCAR_012161 Daucus carota HOM05D003987 ORTHO05D004532 3.3e-42 177.2 522 33.0
unitig_26.g9098 Utricularia gibba HOM05D003987 ORTHO05D004532 4.3e-42 176.8 144 70.8
Thhalv10016588m.g Eutrema salsugineum HOM05D003987 ORTHO05D004532 5.6e-42 176.4 540 32.2
Solyc09g011820.4 Solanum lycopersicum HOM05D003987 ORTHO05D004532 5.6e-42 176.4 460 34.6
AT2G37960 Arabidopsis thaliana HOM05D003987 ORTHO05D004532 7.4e-42 176.0 530 32.1
Carub.0004s1992 Capsella rubella HOM05D003987 ORTHO05D004532 7.4e-42 176.0 531 32.4
FvH4_6g12360 Fragaria vesca HOM05D003987 ORTHO05D004532 2.1e-41 174.5 552 33.0
FAN02G3471 Fragaria x ananassa HOM05D003987 ORTHO05D004532 2.1e-41 174.5 551 31.8
AL4G34930 Arabidopsis lyrata HOM05D003987 ORTHO05D004532 1.4e-40 171.8 534 31.5
Thhalv10010371m.g Eutrema salsugineum HOM05D003987 ORTHO05D004532 1.4e-40 171.8 490 33.5
Nitab4.5_0002152g0110 Nicotiana tabacum HOM05D003987 ORTHO05D004532 1.4e-40 171.8 512 32.2
MSTRG.19040 Avicennia marina HOM05D003987 ORTHO05D004532 5.3e-40 169.9 144 65.3
Sp4g20270 Schrenkiella parvula HOM05D003987 ORTHO05D004532 4.5e-39 166.8 533 31.9
BcaB02g09232 Brassica carinata HOM05D003987 ORTHO05D004532 4.2e-37 160.2 446 33.2
FAN09G0914 Fragaria x ananassa HOM05D003987 ORTHO05D004532 1.6e-36 158.3 551 30.9
BcaC02g11934 Brassica carinata HOM05D003987 ORTHO05D004532 1.0e-35 155.6 431 33.4
C04p09710 Brassica napus HOM05D003987 ORTHO05D004532 3.0e-35 154.1 431 32.9
BolC4t28137H Brassica oleracea HOM05D003987 ORTHO05D004532 3.9e-35 153.7 525 31.4
A04p29100 Brassica napus HOM05D003987 ORTHO05D004532 5.1e-35 153.3 529 30.8
AT3G54060 Arabidopsis thaliana HOM05D003987 ORTHO05D004532 1.9e-34 151.4 473 32.1
A07p21960 Brassica napus HOM05D003987 ORTHO05D004532 9.7e-34 149.1 437 31.6
BraA04t18380Z Brassica rapa HOM05D003987 ORTHO05D004532 1.3e-33 148.7 540 30.0
BolC4t22577H Brassica oleracea HOM05D003987 ORTHO05D004532 4.8e-33 146.7 434 32.9
BraA05t19770Z Brassica rapa HOM05D003987 ORTHO05D004532 4.8e-33 146.7 432 32.9
BraA07t29878Z Brassica rapa HOM05D003987 ORTHO05D004532 6.3e-33 146.4 438 32.2
CAN.G351.10 Capsicum annuum HOM05D003987 ORTHO05D004532 6.3e-33 146.4 277 43.3
ECA248G1591 Erigeron canadensis HOM05D003987 ORTHO05D004532 1.4e-32 145.2 515 30.3
A05p08030 Brassica napus HOM05D003987 ORTHO05D004532 2.4e-32 144.4 432 32.6
arahy.Tifrunner.gnm1.ann1.84Z36X Arachis hypogaea HOM05D003987 ORTHO05D004532 5.3e-32 143.3 521 30.3
arahy.Tifrunner.gnm1.ann1.C5KK4K Arachis hypogaea HOM05D003987 ORTHO05D004532 1.5e-31 141.7 435 32.2
CARHR132510 Cardamine hirsuta HOM05D003987 ORTHO05D004532 3.4e-31 140.6 523 29.8
Sed0006107 Sechium edule HOM05D003987 ORTHO05D004532 4.5e-31 140.2 451 31.0
C06p21870 Brassica napus HOM05D003987 ORTHO05D004532 6.5e-30 136.3 450 30.7
TAR623G1001 Trochodendron aralioides HOM05D003987 ORTHO05D004532 1.9e-29 134.8 467 31.3
BcaC08g44664 Brassica carinata HOM05D003987 ORTHO05D004532 7.2e-29 132.9 449 30.5
Duzib093G1974 Durio zibethinus HOM05D003987 ORTHO05D004532 2.1e-28 131.3 273 35.9
Actinidia01122 Actinidia chinensis HOM05D003987 ORTHO05D004532 2.7e-28 131.0 413 31.2
arahy.Tifrunner.gnm1.ann1.L5BN96 Arachis hypogaea HOM05D003987 ORTHO05D004532 7.9e-28 129.4 513 29.2
BcaB02g07750 Brassica carinata HOM05D003987 ORTHO05D004532 2.3e-27 127.9 433 31.6
HPP92_003415 Vanilla planifolia HOM05D003987 ORTHO05D004532 3.0e-27 127.5 445 28.5
Solyc10g086750.1 Solanum lycopersicum HOM05D003987 ORTHO05D004532 3.3e-26 124.0 129 54.3
Solyc10g086740.3 Solanum lycopersicum HOM05D003987 ORTHO05D004532 2.2e-25 121.3 345 35.9
Gohir.D01G213600 Gossypium hirsutum HOM05D003987 ORTHO05D004532 1.4e-24 118.6 433 28.4
ATR0618G159 Amborella trichopoda HOM05D003987 ORTHO05D004532 1.8e-24 118.2 487 28.7
CDE09G1167 Ceratophyllum demersum HOM05D003987 ORTHO05D004532 3.1e-24 117.5 510 28.6
Sp5g08320 Schrenkiella parvula HOM05D003987 ORTHO05D004532 4.1e-24 117.1 481 28.3
TPR.G8224 Trifolium pratense HOM05D003987 ORTHO05D004532 4.1e-24 117.1 116 52.6
TWI74G0508 Tripterygium wilfordii HOM05D003987 ORTHO05D004532 6.9e-24 116.3 459 29.4
CDE02G0690 Ceratophyllum demersum HOM05D003987 ORTHO05D004532 1.5e-23 115.2 515 27.4
Glyma.03G074167 Glycine max HOM05D003987 ORTHO05D004532 5.9e-23 113.2 397 29.2
Glyma.01G108800 Glycine max HOM05D003987 ORTHO05D004532 1.3e-22 112.1 421 29.5
Glyma.01G108900 Glycine max HOM05D003987 ORTHO05D004532 1.4e-21 108.6 416 29.6
Glyma.U031101 Glycine max HOM05D003987 ORTHO05D004532 2.5e-21 107.8 416 29.6
Sp5g18210 Schrenkiella parvula HOM05D003987 ORTHO05D004532 1.8e-19 101.7 476 27.9
TPR.G8182 Trifolium pratense HOM05D003987 ORTHO05D004532 1.8e-19 101.7 393 29.8
SEGI_16848 Sequoiadendron giganteum HOM05D003987 ORTHO05D004532 4.4e-18 97.1 539 25.4
Medtr7g066170 Medicago truncatula HOM05D003987 ORTHO05D004532 2.2e-17 94.7 181 37.0
Carub.0005s2065 Capsella rubella HOM05D003987 ORTHO05D004532 2.4e-16 91.3 458 29.0
Glyma.01G153900 Glycine max HOM05D003987 ORTHO05D004532 4.1e-16 90.5 339 27.4
FAN05G0535 Fragaria x ananassa HOM05D003987 ORTHO05D004532 1.5e-15 88.6 261 32.2
Eucgr.A00531 Eucalyptus grandis HOM05D003987 ORTHO05D004532 5.0e-14 83.6 184 39.7
VMungo1309G3141 Vigna mungo HOM05D014262 ORTHO05D018084 5.0e-14 83.6 198 31.3
Phvul.005G150800 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 1.4e-13 82.0 110 40.0
CDE04G2728 Ceratophyllum demersum HOM05D003987 ORTHO05D004532 1.9e-13 81.6 125 40.8
Phvul.006G111000 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 3.2e-13 80.9 183 32.8
Phvul.010G006100 Phaseolus vulgaris HOM05D014262 ORTHO05D004532 5.5e-13 80.1 101 41.6
Zm00001eb298020 Zea mays HOM05D003987 ORTHO05D004532 3.6e-12 77.4 529 25.5
TPR.G34870 Trifolium pratense HOM05D003987 ORTHO05D004532 8.0e-12 76.3 175 33.7
TPR.G13647 Trifolium pratense HOM05D003987 ORTHO05D004532 1.8e-11 75.1 99 38.4
Sabra16G0105800 Salix brachista HOM05D003987 ORTHO05D004532 8.8e-11 72.8 138 39.9
Dinv04008 Davidia involucrata HOM05D003987 ORTHO05D004532 1.5e-10 72.0 84 50.0
Phvul.008G081900 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 1.5e-10 72.0 100 40.0
Rhsim07G0146000 Rhododendron simsii HOM05D003987 ORTHO05D004532 4.4e-10 70.5 187 34.8
VMungo1309G2694 Vigna mungo HOM05D014262 ORTHO05D018084 7.4e-10 69.7 100 39.0
Phvul.008G082101 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 9.7e-10 69.3 187 31.0
SHI32881 Sapria himalayana HOM05D003987 ORTHO05D004532 4.8e-09 67.0 54 59.3
Phvul.010G006800 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 3.1e-08 64.3 132 31.8
Os03g0100010 Oryza sativa ssp. japonica HOM05D003987 ORTHO05D004532 5.9e-07 60.1 68 47.1
BolC6t37375H Brassica oleracea HOM05D003987 ORTHO05D004532 7.7e-07 59.7 64 46.9
Mapoly0053s0106 Marchantia polymorpha HOM05D003987 ORTHO05D004532 5.0e-06 57.0 378 23.5
Psat6g189000 Pisum sativum HOM05D003987 ORTHO05D004532 5.0e-06 57.0 223 27.8
VMungo0331G1594 Vigna mungo HOM05D003987 ORTHO05D004532 5.0e-06 57.0 119 29.4


User provided reference genes

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