Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g14136 Utricularia gibba HOM05D004089 ORTHO05D004687 6.8e-163 577.4 321 100.0
unitig_26.g9653 Utricularia gibba HOM05D004089 ORTHO05D004687 4.8e-68 262.3 298 52.7
MSTRG.11370 Avicennia marina HOM05D004089 ORTHO05D004687 7.2e-64 248.4 311 50.2
unitig_749.g13440 Utricularia gibba HOM05D004089 ORTHO05D004687 2.9e-57 226.5 307 46.3
MSTRG.4442 Avicennia marina HOM05D004089 ORTHO05D004687 2.3e-54 216.9 307 45.6
Oeu052462.1 Olea europaea HOM05D004089 ORTHO05D004687 3.1e-54 216.5 305 46.6
Migut.D01757 Erythranthe guttata HOM05D004089 ORTHO05D004687 2.6e-53 213.4 296 47.6
Oeu047272.1 Olea europaea HOM05D004089 ORTHO05D004687 2.9e-52 209.9 295 46.1
Cc04_g14350 Coffea canephora HOM05D004089 ORTHO05D004687 4.9e-52 209.1 298 45.0
Rhsim08G0151100 Rhododendron simsii HOM05D004089 ORTHO05D004687 6.6e-49 198.7 310 41.0
Oeu046997.1 Olea europaea HOM05D004089 ORTHO05D004687 1.5e-48 197.6 311 41.5
CSS0014968 Camellia sinensis var. sinensis HOM05D004089 ORTHO05D004687 7.3e-48 195.3 293 43.0
Ciclev10020945m.g Citrus clementina HOM05D004089 ORTHO05D004687 1.6e-47 194.1 300 43.0
Thecc.03G094700 Theobroma cacao HOM05D004089 ORTHO05D004687 1.6e-47 194.1 298 43.0
Prupe.5G198800 Prunus persica HOM05D004089 ORTHO05D004687 2.1e-47 193.7 302 43.7
Manes.14G082100 Manihot esculenta HOM05D004089 ORTHO05D004687 8.0e-47 191.8 309 42.4
QL10p017912 Quercus lobata HOM05D004089 ORTHO05D004687 1.4e-46 191.0 304 42.4
Cfa019278 Carpinus fangiana HOM05D004089 ORTHO05D004687 4.0e-46 189.5 302 42.4
COL.COLO4_00682 Corchorus olitorius HOM05D004089 ORTHO05D004687 5.2e-46 189.1 300 41.7
Haze_07654 Corylus avellana HOM05D004089 ORTHO05D004687 2.6e-45 186.8 302 42.1
Dinv10661 Davidia involucrata HOM05D004089 ORTHO05D004687 3.4e-45 186.4 278 43.5
Aqoxy3G03505 Aquilegia oxysepala HOM05D004089 ORTHO05D004687 7.5e-45 185.3 303 39.6
Glyma.06G196700 Glycine max HOM05D004089 ORTHO05D004687 7.5e-45 185.3 301 39.9
Duzib068G1131 Durio zibethinus HOM05D004089 ORTHO05D004687 9.8e-45 184.9 290 41.7
PGSC0003DMG400024664 Solanum tuberosum HOM05D004089 ORTHO05D004687 9.8e-45 184.9 294 42.5
FAN08G0374 Fragaria x ananassa HOM05D004089 ORTHO05D004687 1.3e-44 184.5 289 42.2
CSS0037629 Camellia sinensis var. sinensis HOM05D004089 ORTHO05D004687 1.7e-44 184.1 297 41.8
FvH4_5g14500 Fragaria vesca HOM05D004089 ORTHO05D004687 1.7e-44 184.1 289 41.9
FAN18G2014 Fragaria x ananassa HOM05D004089 ORTHO05D004687 1.7e-44 184.1 289 41.9
FAN13G1369 Fragaria x ananassa HOM05D004089 ORTHO05D004687 2.9e-44 183.3 289 41.9
CSS0014802 Camellia sinensis var. sinensis HOM05D004089 ORTHO05D004687 3.7e-44 183.0 298 41.9
Glyma.04G165800 Glycine max HOM05D004089 ORTHO05D004687 3.7e-44 183.0 301 39.5
EL10Ac5g11067 Beta vulgaris HOM05D004089 ORTHO05D004687 4.9e-44 182.6 312 40.1
Solyc03g115690.1 Solanum lycopersicum HOM05D004089 ORTHO05D004687 4.9e-44 182.6 292 42.5
Duzib205G1783 Durio zibethinus HOM05D004089 ORTHO05D004687 6.4e-44 182.2 299 41.8
Phvul.009G184900 Phaseolus vulgaris HOM05D004089 ORTHO05D004687 1.4e-43 181.0 292 41.1
BolC7t45022H Brassica oleracea HOM05D004089 ORTHO05D004687 2.4e-43 180.3 321 40.5
BraA03t13814Z Brassica rapa HOM05D004089 ORTHO05D004687 2.4e-43 180.3 321 40.5
TAR629G0233 Trochodendron aralioides HOM05D004089 ORTHO05D004687 2.4e-43 180.3 299 41.1
Gorai.001G079000 Gossypium raimondii HOM05D004089 ORTHO05D004687 3.2e-43 179.9 295 41.0
C07p44990 Brassica napus HOM05D004089 ORTHO05D004687 4.1e-43 179.5 321 40.5
Gohir.A07G070400 Gossypium hirsutum HOM05D004089 ORTHO05D004687 4.1e-43 179.5 295 40.7
Sopen03g034670 Solanum pennellii HOM05D004089 ORTHO05D004687 4.1e-43 179.5 292 42.5
MD06G1197900 Malus domestica HOM05D004089 ORTHO05D004687 5.4e-43 179.1 295 42.0
RcHm_v2.0_Chr7g0182161 Rosa chinensis HOM05D004089 ORTHO05D004687 5.4e-43 179.1 291 41.6
Gohir.D07G074900 Gossypium hirsutum HOM05D004089 ORTHO05D004687 7.1e-43 178.7 295 40.7
MBI19_g43436_MAGBIO Magnolia biondii HOM05D004089 ORTHO05D004687 1.2e-42 177.9 300 40.0
CiPaw.12G011700 Carya illinoinensis HOM05D004089 ORTHO05D004687 1.6e-42 177.6 306 40.2
Lj4g0011676 Lotus japonicus HOM05D004089 ORTHO05D004687 1.6e-42 177.6 303 41.9
VMungo1309G2967 Vigna mungo HOM05D004089 ORTHO05D004687 2.1e-42 177.2 300 39.7
DCAR_026035 Daucus carota HOM05D004089 ORTHO05D004687 2.7e-42 176.8 312 43.3
Carub.0008s2201 Capsella rubella HOM05D004089 ORTHO05D004687 3.5e-42 176.4 288 42.0
TPR.G2017 Trifolium pratense HOM05D004089 ORTHO05D004687 3.5e-42 176.4 322 38.5
Peaxi162Scf00274g10024 Petunia axillaris HOM05D004089 ORTHO05D004687 4.6e-42 176.0 298 40.3
Psat4g049120 Pisum sativum HOM05D004089 ORTHO05D004687 4.6e-42 176.0 316 40.2
A03p46950 Brassica napus HOM05D004089 ORTHO05D004687 6.0e-42 175.6 321 39.3
Atru.chr9.325 Acer truncatum HOM05D004089 ORTHO05D004687 7.8e-42 175.3 300 40.3
MD14G1205500 Malus domestica HOM05D004089 ORTHO05D004687 1.7e-41 174.1 294 40.1
Medtr3g037110 Medicago truncatula HOM05D004089 ORTHO05D004687 2.3e-41 173.7 282 39.7
Rhsim08G0151200 Rhododendron simsii HOM05D004089 ORTHO05D004687 3.0e-41 173.3 311 37.9
THA.LOC104801435 Tarenaya hassleriana HOM05D004089 ORTHO05D004687 3.0e-41 173.3 306 39.9
Psat5g199240 Pisum sativum HOM05D004089 ORTHO05D004687 5.1e-41 172.6 280 40.0
SalBow7G3788 Salvia bowleyana HOM05D004089 ORTHO05D004687 8.6e-41 171.8 288 43.1
Hma1.2p1_0060F.1_g033460 Hydrangea macrophylla HOM05D004089 ORTHO05D004687 1.5e-40 171.0 295 40.0
Medtr4g109020 Medicago truncatula HOM05D004089 ORTHO05D004687 1.5e-40 171.0 291 40.9
BcaB04g19907 Brassica carinata HOM05D004089 ORTHO05D004687 2.5e-40 170.2 318 39.6
A09p07290 Brassica napus HOM05D004089 ORTHO05D004687 3.3e-40 169.9 318 38.7
Phvul.003G187900 Phaseolus vulgaris HOM05D004089 ORTHO05D004687 3.3e-40 169.9 301 40.2
AT5G61340 Arabidopsis thaliana HOM05D004089 ORTHO05D004687 1.2e-39 167.9 298 41.3
VMungo1215G0778 Vigna mungo HOM05D004089 ORTHO05D004687 1.2e-39 167.9 301 40.2
Sed0006516 Sechium edule HOM05D004089 ORTHO05D004687 2.1e-39 167.2 290 39.0
Potri.015G060900 Populus trichocarpa HOM05D004089 ORTHO05D004687 2.8e-39 166.8 291 39.9
SGA_v2.0_scaffold7G04046 Striga asiatica HOM05D004089 ORTHO05D004687 4.7e-39 166.0 300 38.7
Glyma.05G024600 Glycine max HOM05D004089 ORTHO05D004687 6.2e-39 165.6 301 40.9
Sp2g24550 Schrenkiella parvula HOM05D004089 ORTHO05D004687 6.2e-39 165.6 320 39.7
C09p08150 Brassica napus HOM05D004089 ORTHO05D004687 1.1e-38 164.9 322 38.8
CiPaw.11G047700 Carya illinoinensis HOM05D004089 ORTHO05D004687 1.1e-38 164.9 247 42.9
Migut.I00216 Erythranthe guttata HOM05D004089 ORTHO05D004687 1.1e-38 164.9 307 40.7
Sc04g0002900 Simmondsia chinensis HOM05D004089 ORTHO05D004687 1.1e-38 164.9 297 37.0
Manes.06G089200 Manihot esculenta HOM05D004089 ORTHO05D004687 1.4e-38 164.5 299 37.8
TWI15G0089 Tripterygium wilfordii HOM05D004089 ORTHO05D004687 1.4e-38 164.5 287 40.4
AL8G38000 Arabidopsis lyrata HOM05D004089 ORTHO05D004687 1.8e-38 164.1 296 39.5
PSO478G2558 Papaver somniferum HOM05D004089 ORTHO05D004687 1.8e-38 164.1 302 37.7
PGR044G2522 Punica granatum HOM05D004089 ORTHO05D004687 1.8e-38 164.1 304 40.1
Ca_21804_v3 Cicer arietinum L. HOM05D004089 ORTHO05D004687 2.3e-38 163.7 319 40.8
Lj5P107T92 Lonicera japonica HOM05D004089 ORTHO05D004687 4.0e-38 162.9 292 40.4
PSO017G6425 Papaver somniferum HOM05D004089 ORTHO05D004687 4.0e-38 162.9 302 37.1
DCAR_016583 Daucus carota HOM05D004089 ORTHO05D004687 6.8e-38 162.2 316 36.4
SGA_v2.0_scaffold25G10938 Striga asiatica HOM05D004089 ORTHO05D004687 6.8e-38 162.2 328 38.4
TWI81G0628 Tripterygium wilfordii HOM05D004089 ORTHO05D004687 6.8e-38 162.2 286 42.0
arahy.Tifrunner.gnm1.ann1.JX1FK0 Arachis hypogaea HOM05D004089 ORTHO05D004687 1.2e-37 161.4 309 37.5
Sabra15G0086100 Salix brachista HOM05D004089 ORTHO05D004687 1.5e-37 161.0 295 39.3
CANSAT80G2067 Cannabis sativa HOM05D004089 ORTHO05D004687 2.0e-37 160.6 306 37.6
Solyc06g069680.1 Solanum lycopersicum HOM05D004089 ORTHO05D004687 2.6e-37 160.2 294 37.4
CARHR275100 Cardamine hirsuta HOM05D004089 ORTHO05D004687 5.8e-37 159.1 291 40.2
Lsat_1_v5_gn_4_109001 Lactuca sativa HOM05D004089 ORTHO05D004687 5.8e-37 159.1 292 39.7
Nn3g17343 Nelumbo nucifera HOM05D004089 ORTHO05D004687 5.8e-37 159.1 289 39.1
TAR371G1138 Trochodendron aralioides HOM05D004089 ORTHO05D004687 9.9e-37 158.3 270 40.0
HanXRQChr16g0502591 Helianthus annuus HOM05D004089 ORTHO05D004687 1.7e-36 157.5 291 38.8
HanXRQChr09g0270961 Helianthus annuus HOM05D004089 ORTHO05D004687 3.7e-36 156.4 292 38.7
Sopen06g026980 Solanum pennellii HOM05D004089 ORTHO05D004687 3.7e-36 156.4 294 38.1
Glyma.17G102700 Glycine max HOM05D004089 ORTHO05D004687 4.9e-36 156.0 302 39.1
CsaV3_1G005700 Cucumis sativus L. HOM05D004089 ORTHO05D004687 8.3e-36 155.2 303 37.3
TWI60G1703 Tripterygium wilfordii HOM05D004089 ORTHO05D004687 8.3e-36 155.2 287 41.1
Aa31LG11G2070 Aethionema arabicum HOM05D004089 ORTHO05D004687 1.9e-35 154.1 296 38.2
CsaV3_1G002580 Cucumis sativus L. HOM05D004089 ORTHO05D004687 1.9e-35 154.1 317 35.0
PSO063G0630 Papaver somniferum HOM05D004089 ORTHO05D004687 1.9e-35 154.1 315 35.9
MELO3C002001.2 Cucumis melo HOM05D004089 ORTHO05D004687 2.4e-35 153.7 303 37.6
Lj1g0017851 Lotus japonicus HOM05D004089 ORTHO05D004687 5.4e-35 152.5 304 38.5
ClCG04G012070 Citrullus lanatus HOM05D004089 ORTHO05D004687 2.1e-34 150.6 303 37.6
Thhalv10005448m.g Eutrema salsugineum HOM05D004089 ORTHO05D004687 2.7e-34 150.2 320 35.6
HanXRQChr04g0107211 Helianthus annuus HOM05D004089 ORTHO05D004687 3.5e-34 149.8 300 39.0
ClCG06G015980 Citrullus lanatus HOM05D004089 ORTHO05D004687 6.0e-34 149.1 320 34.1
Lalb_Chr13g0303071 Lupinus albus HOM05D004089 ORTHO05D004687 7.8e-34 148.7 302 40.4
Sed0010910 Sechium edule HOM05D004089 ORTHO05D004687 7.8e-34 148.7 319 36.7
Gohir.D12G182200 Gossypium hirsutum HOM05D004089 ORTHO05D004687 1.0e-33 148.3 288 37.8
MELO3C017194.2 Cucumis melo HOM05D004089 ORTHO05D004687 1.3e-33 147.9 318 33.6
Gorai.008G195500 Gossypium raimondii HOM05D004089 ORTHO05D004687 1.3e-33 147.9 288 37.5
DCAR_021516 Daucus carota HOM05D004089 ORTHO05D004687 1.7e-33 147.5 298 35.9
BcaC03g18095 Brassica carinata HOM05D004089 ORTHO05D004687 6.6e-33 145.6 321 38.3
BcaC04g23456 Brassica carinata HOM05D004089 ORTHO05D004687 2.5e-32 143.7 322 34.5
Sed0015191 Sechium edule HOM05D004089 ORTHO05D004687 2.5e-32 143.7 307 34.2
Gohir.A11G032400 Gossypium hirsutum HOM05D004089 ORTHO05D004687 4.3e-32 142.9 296 35.1
Lsat_1_v5_gn_1_13901 Lactuca sativa HOM05D004089 ORTHO05D004687 4.3e-32 142.9 293 37.5
Eucgr.K02492 Eucalyptus grandis HOM05D004089 ORTHO05D004687 9.6e-32 141.7 268 39.2
Gohir.D11G035700 Gossypium hirsutum HOM05D004089 ORTHO05D004687 3.6e-31 139.8 296 35.1
Gorai.007G038500 Gossypium raimondii HOM05D004089 ORTHO05D004687 4.7e-31 139.4 296 34.8
Os12g0577200 Oryza sativa ssp. japonica HOM05D004089 ORTHO05D004687 6.2e-31 139.0 317 35.0
BcaB07g29822 Brassica carinata HOM05D004089 ORTHO05D004687 6.8e-30 135.6 320 36.9
Potri.012G068000 Populus trichocarpa HOM05D004089 ORTHO05D004687 8.9e-30 135.2 245 40.4
PGR083G0705 Punica granatum HOM05D004089 ORTHO05D004687 9.9e-29 131.7 305 36.1
Zm00001eb136250 Zea mays HOM05D004089 ORTHO05D004687 2.9e-28 130.2 303 34.7
BolC2t12218H Brassica oleracea HOM05D002313 ORTHO05D003747 3.8e-28 129.8 302 36.8
Eucgr.B00548 Eucalyptus grandis HOM05D004089 ORTHO05D004687 3.8e-28 129.8 320 34.4
Oeu006382.1 Olea europaea HOM05D000714 ORTHO05D000544 4.2e-27 126.3 174 41.4
Haze_14490 Corylus avellana HOM05D004089 ORTHO05D004687 1.3e-25 121.3 305 33.4
C02p61630 Brassica napus HOM05D002313 ORTHO05D003747 1.7e-25 120.9 323 34.7
Dinv38750 Davidia involucrata HOM05D004089 ORTHO05D004687 2.3e-25 120.6 261 40.2
QL02p084965 Quercus lobata HOM05D004089 ORTHO05D004687 2.3e-25 120.6 304 33.6
A02p41700 Brassica napus HOM05D002313 ORTHO05D004687 3.0e-25 120.2 323 34.4
Rhsim08G0150900 Rhododendron simsii HOM05D004089 ORTHO05D004687 3.0e-25 120.2 180 38.3
Gohir.A11G032333 Gossypium hirsutum HOM05D004089 ORTHO05D004687 3.9e-25 119.8 244 35.7
Lalb_Chr07g0178191 Lupinus albus HOM05D004089 ORTHO05D004687 5.1e-25 119.4 205 39.5
BraA02t09111Z Brassica rapa HOM05D004089 ORTHO05D004687 6.6e-25 119.0 316 34.8
ATR0730G119 Amborella trichopoda HOM05D004089 ORTHO05D004687 5.6e-24 115.9 291 35.7
Thecc.04G088100 Theobroma cacao HOM05D004089 ORTHO05D004687 3.6e-23 113.2 294 35.4
Zm00001eb029590 Zea mays HOM05D004089 ORTHO05D004687 3.6e-23 113.2 306 31.7
GSVIVG01011469001 Vitis vinifera HOM05D004089 ORTHO05D004687 1.1e-22 111.7 300 32.0
Duzib264G0571 Durio zibethinus HOM05D004089 ORTHO05D004687 4.0e-22 109.8 308 33.1
Ca_13877_v3 Cicer arietinum L. HOM05D004089 ORTHO05D004687 2.0e-21 107.5 160 39.4
THA.LOC104818514 Tarenaya hassleriana HOM05D004089 ORTHO05D004687 4.4e-21 106.3 292 32.9
Dinv11500 Davidia involucrata HOM05D001066 ORTHO05D000891 7.6e-21 105.5 292 32.5
Sabra04G0077800 Salix brachista HOM05D004089 ORTHO05D004687 6.4e-20 102.4 298 31.5
Manes.02G049400 Manihot esculenta HOM05D004089 ORTHO05D004687 3.5e-18 96.7 297 30.3
Manes.01G100800 Manihot esculenta HOM05D004089 ORTHO05D004687 6.0e-18 95.9 288 29.5
Potri.004G102800 Populus trichocarpa HOM05D004089 ORTHO05D004687 1.0e-17 95.1 292 31.5
Gohir.A12G179600 Gossypium hirsutum HOM05D004089 ORTHO05D004687 1.1e-16 91.7 175 40.6
Cpa.g.sc13.300 Carica papaya HOM05D004089 ORTHO05D004687 2.5e-16 90.5 123 39.8
CiPaw.03G021500 Carya illinoinensis HOM05D004089 ORTHO05D004687 2.5e-16 90.5 292 33.6
Zm00001eb264770 Zea mays HOM05D004089 ORTHO05D004687 1.3e-15 88.2 331 30.2
TAR369G0101 Trochodendron aralioides HOM05D004089 ORTHO05D004687 2.1e-15 87.4 138 35.5
TAR626G1449 Trochodendron aralioides HOM05D004089 ORTHO05D004687 3.6e-15 86.7 138 35.5
AUR62008468 Chenopodium quinoa HOM05D000001 ORTHO05D011953 2.4e-14 84.0 103 43.7
Lj9A467G76 Lonicera japonica HOM05D004089 ORTHO05D004687 2.6e-13 80.5 122 36.9
TPR.G12274 Trifolium pratense HOM05D000041 ORTHO05D006140 9.9e-13 78.6 93 43.0
Os12g0507400 Oryza sativa ssp. japonica HOM05D004089 ORTHO05D004687 3.8e-12 76.6 314 28.3
Duzib147G1274 Durio zibethinus HOM05D004089 ORTHO05D004687 1.4e-11 74.7 222 32.0
Atru.chr8.335 Acer truncatum HOM05D004089 ORTHO05D004687 3.2e-11 73.6 292 28.8
CDE04G1821 Ceratophyllum demersum HOM05D004089 ORTHO05D004687 5.4e-11 72.8 128 34.4
CDE07G1350 Ceratophyllum demersum HOM05D004089 ORTHO05D004687 1.2e-10 71.6 146 32.9
PSO063G7677 Papaver somniferum HOM05D004089 ORTHO05D004687 1.2e-10 71.6 101 38.6
CSS0047924 Camellia sinensis var. sinensis HOM05D004089 ORTHO05D004687 2.7e-10 70.5 159 30.8
SEGI_21937 Sequoiadendron giganteum HOM05D003669 ORTHO05D005046 1.1e-08 65.1 289 25.3
COL.COLO4_12233 Corchorus olitorius HOM05D004089 ORTHO05D004687 3.3e-08 63.5 88 39.8


User provided reference genes

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