Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 9.6e-203 709.9 349 100.0
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 3.3e-110 402.5 333 64.3
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 8.1e-101 371.3 333 60.1
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 2.6e-99 366.3 333 58.0
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.4e-97 358.6 313 59.4
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.4e-97 358.6 313 60.1
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 9.2e-97 357.8 325 59.1
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 3.0e-95 352.8 288 61.8
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 3.9e-95 352.4 286 62.9
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 6.6e-95 351.7 286 62.9
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 4.3e-94 349.0 286 61.9
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 5.6e-94 348.6 286 60.8
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 7.3e-94 348.2 312 58.0
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 1.2e-93 347.4 286 61.5
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 3.6e-93 345.9 328 54.9
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 6.2e-93 345.1 286 61.2
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 8.1e-93 344.7 314 57.3
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.4e-92 344.0 299 58.9
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.1e-92 342.8 286 60.5
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 3.1e-92 342.8 286 60.5
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 3.1e-92 342.8 286 59.8
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 6.8e-92 341.7 286 59.8
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 6.8e-92 341.7 286 61.5
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 6.8e-92 341.7 314 58.0
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 2.6e-91 339.7 286 60.1
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 2.6e-91 339.7 297 56.9
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 4.4e-91 339.0 298 58.1
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 5.8e-91 338.6 285 61.1
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 7.6e-91 338.2 289 59.5
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 7.6e-91 338.2 294 57.1
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 1.3e-90 337.4 317 55.8
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.3e-90 337.4 286 58.4
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 1.1e-89 334.3 309 56.0
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.1e-89 334.3 290 59.0
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 1.4e-89 334.0 286 58.7
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.4e-89 334.0 304 58.9
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.9e-89 333.6 302 56.3
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 5.4e-89 332.0 300 58.0
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 7.1e-89 331.6 286 58.7
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 7.1e-89 331.6 286 58.4
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 7.1e-89 331.6 286 59.4
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 7.1e-89 331.6 289 59.2
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 7.1e-89 331.6 313 55.3
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 9.2e-89 331.3 300 57.7
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 9.2e-89 331.3 255 62.0
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 9.2e-89 331.3 284 58.8
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.2e-88 330.9 291 57.7
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.6e-88 330.5 284 59.2
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.6e-88 330.5 291 59.5
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.6e-88 330.5 311 54.3
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 2.7e-88 329.7 286 57.7
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.5e-88 329.3 319 53.9
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 4.6e-88 328.9 286 59.1
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 6.0e-88 328.6 287 59.9
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 7.8e-88 328.2 299 56.2
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 7.8e-88 328.2 283 58.0
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.3e-87 327.4 295 56.6
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.7e-87 327.0 283 58.7
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 2.3e-87 326.6 286 57.7
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 5.1e-87 325.5 283 57.2
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 8.6e-87 324.7 294 56.5
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 1.1e-86 324.3 309 55.3
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.1e-86 324.3 283 58.0
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.1e-86 324.3 287 58.2
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.2e-85 320.9 283 58.0
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 2.8e-85 319.7 240 63.8
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 4.7e-85 318.9 255 60.0
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 2.4e-84 316.6 311 52.4
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 5.2e-84 315.5 286 55.9
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 2.0e-83 313.5 377 47.2
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 4.4e-83 312.4 306 56.2
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 2.2e-82 310.1 284 54.9
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.1e-81 307.8 293 52.9
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.2e-80 304.3 311 53.7
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 7.8e-80 301.6 299 54.2
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 1.0e-79 301.2 255 56.5
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 3.9e-79 299.3 321 48.9
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 1.1e-78 297.7 352 48.6
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 1.1e-76 291.2 261 56.7
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 1.1e-76 291.2 281 54.4
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 9.0e-76 288.1 334 47.9
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 5.8e-75 285.4 280 52.9
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 3.5e-72 276.2 297 46.5
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 6.0e-72 275.4 275 51.6
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 8.7e-71 271.6 288 52.1
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.5e-70 270.0 267 51.3
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 2.5e-70 270.0 294 45.9
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 4.8e-69 265.8 269 49.4
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.0e-67 260.4 179 65.9
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 7.1e-65 251.9 266 46.2
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 3.7e-53 213.0 355 38.3
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.3e-45 188.0 287 39.7
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.2e-43 181.4 321 37.1
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 8.5e-42 175.3 283 39.2
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 9.7e-38 161.8 198 44.4
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 1.4e-36 157.9 278 35.6
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 3.6e-32 143.3 286 33.6
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 3.5e-19 100.1 112 44.6
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.0e-18 98.6 79 51.9
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 2.9e-18 97.1 87 55.2
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.9e-17 94.4 186 31.7
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 6.1e-16 89.4 72 58.3
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 4.0e-15 86.7 73 57.5
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 5.2e-15 86.3 79 57.0
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.7e-13 81.3 96 46.9
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 1.1e-09 68.6 70 47.1
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 5.2e-07 59.7 40 62.5
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 6.8e-07 59.3 42 61.9
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 8.9e-07 58.9 32 78.1


User provided reference genes

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