Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g14105 Utricularia gibba HOM05D003462 ORTHO05D003946 1.7e-271 938.7 472 100.0
MSTRG.9572 Avicennia marina HOM05D003462 ORTHO05D003946 3.4e-171 605.5 524 60.3
Migut.D01480 Erythranthe guttata HOM05D003462 ORTHO05D003946 1.8e-167 593.2 488 63.3
SalBow1G4644 Salvia bowleyana HOM05D003462 ORTHO05D003946 7.2e-161 571.2 587 54.9
MSTRG.4505 Avicennia marina HOM05D003462 ORTHO05D003946 1.1e-156 557.4 475 60.6
Migut.D01481 Erythranthe guttata HOM05D003462 ORTHO05D003946 9.4e-153 544.3 467 59.7
Aqoxy3G00588 Aquilegia oxysepala HOM05D003462 ORTHO05D003946 1.2e-152 543.9 464 61.0
SalBow1G8183 Salvia bowleyana HOM05D003462 ORTHO05D003946 1.6e-152 543.5 493 58.4
CSS0013858 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 2.1e-152 543.1 483 59.4
CSS0048759 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 2.1e-152 543.1 483 59.4
Ciclev10019214m.g Citrus clementina HOM05D003462 ORTHO05D003946 2.3e-151 539.7 439 63.1
Cc04_g07970 Coffea canephora HOM05D003462 ORTHO05D003946 5.2e-151 538.5 473 59.2
Lj5A138T59 Lonicera japonica HOM05D003462 ORTHO05D003946 6.7e-151 538.1 463 59.4
DCAR_010190 Daucus carota HOM05D003462 ORTHO05D003946 2.6e-150 536.2 463 59.2
Actinidia35059 Actinidia chinensis HOM05D003462 ORTHO05D003946 4.4e-150 535.4 471 59.2
ECA246G0130 Erigeron canadensis HOM05D003462 ORTHO05D003946 1.8e-148 530.0 473 57.5
Sopen03g033710 Solanum pennellii HOM05D003462 ORTHO05D003946 1.2e-147 527.3 480 57.5
Solyc03g114640.4 Solanum lycopersicum HOM05D003462 ORTHO05D003946 1.6e-147 526.9 480 57.5
FvH4_5g13110 Fragaria vesca HOM05D003462 ORTHO05D003946 2.0e-147 526.6 466 58.6
FAN18G1062 Fragaria x ananassa HOM05D003462 ORTHO05D003946 2.6e-147 526.2 466 58.4
HanXRQChr05g0157841 Helianthus annuus HOM05D003462 ORTHO05D003946 3.5e-147 525.8 490 55.9
Nn4g23600 Nelumbo nucifera HOM05D003462 ORTHO05D003946 3.5e-147 525.8 485 57.3
Rhsim12G0146800 Rhododendron simsii HOM05D003462 ORTHO05D003946 3.5e-147 525.8 464 59.1
Lalb_Chr23g0274061 Lupinus albus HOM05D003462 ORTHO05D003946 1.0e-146 524.2 466 58.8
Nitab4.5_0002805g0140 Nicotiana tabacum HOM05D003462 ORTHO05D003946 1.0e-146 524.2 512 55.3
EL10Ac5g11203 Beta vulgaris HOM05D003462 ORTHO05D003946 1.3e-146 523.9 527 53.1
Medtr2g058970 Medicago truncatula HOM05D003462 ORTHO05D003946 1.3e-146 523.9 485 56.3
Thecc.03G111900 Theobroma cacao HOM05D003462 ORTHO05D003946 1.3e-146 523.9 482 56.4
TAR371G0026 Trochodendron aralioides HOM05D003462 ORTHO05D003946 1.3e-146 523.9 466 60.1
RcHm_v2.0_Chr7g0184041 Rosa chinensis HOM05D003462 ORTHO05D003946 1.7e-146 523.5 478 57.3
TWI81G0217 Tripterygium wilfordii HOM05D003462 ORTHO05D003946 5.0e-146 521.9 466 57.9
Ca_02712_v3 Cicer arietinum L. HOM05D003462 ORTHO05D003946 1.5e-145 520.4 513 55.2
Prupe.5G211500 Prunus persica HOM05D003462 ORTHO05D003946 1.9e-145 520.0 469 57.6
Lsat_1_v5_gn_5_24441 Lactuca sativa HOM05D003462 ORTHO05D003946 2.5e-145 519.6 466 56.9
MD06G1207100 Malus domestica HOM05D003462 ORTHO05D003946 3.2e-145 519.2 467 57.4
MD14G1217600 Malus domestica HOM05D003462 ORTHO05D003946 3.2e-145 519.2 466 57.3
Phvul.009G204100 Phaseolus vulgaris HOM05D003462 ORTHO05D003946 7.2e-145 518.1 500 54.8
arahy.Tifrunner.gnm1.ann1.HJ4MYC Arachis hypogaea HOM05D003462 ORTHO05D003946 9.4e-145 517.7 479 56.6
arahy.Tifrunner.gnm1.ann1.8883SE Arachis hypogaea HOM05D003462 ORTHO05D003946 1.2e-144 517.3 479 56.6
Glyma.04G158100 Glycine max HOM05D003462 ORTHO05D003946 1.6e-144 516.9 480 56.5
Gohir.D09G245000 Gossypium hirsutum HOM05D003462 ORTHO05D003946 1.6e-144 516.9 464 57.5
Lj1g0015888 Lotus japonicus HOM05D003462 ORTHO05D003946 1.6e-144 516.9 466 57.1
Gohir.A09G244100 Gossypium hirsutum HOM05D003462 ORTHO05D003946 2.1e-144 516.5 464 57.5
Sp5g29190 Schrenkiella parvula HOM05D003462 ORTHO05D003946 2.7e-144 516.2 466 57.9
Manes.01G024300 Manihot esculenta HOM05D003462 ORTHO05D003946 3.6e-144 515.8 463 57.5
Sc24g0002690 Simmondsia chinensis HOM05D003462 ORTHO05D003946 3.6e-144 515.8 476 56.1
THA.LOC104812124 Tarenaya hassleriana HOM05D003462 ORTHO05D003946 4.7e-144 515.4 464 57.1
BolC6t39846H Brassica oleracea HOM05D003462 ORTHO05D003946 1.0e-143 514.2 473 56.7
Sed0016449 Sechium edule HOM05D003462 ORTHO05D003946 1.0e-143 514.2 466 56.4
CARHR067120 Cardamine hirsuta HOM05D003462 ORTHO05D003946 1.4e-143 513.8 463 57.5
Psat1g028640 Pisum sativum HOM05D003462 ORTHO05D003946 1.4e-143 513.8 479 56.4
Cpa.g.sc3.203 Carica papaya HOM05D003462 ORTHO05D003946 1.8e-143 513.5 463 57.5
PSO017G3345 Papaver somniferum HOM05D003462 ORTHO05D003946 1.8e-143 513.5 471 56.7
Aa31LG4G4310 Aethionema arabicum HOM05D003462 ORTHO05D003946 2.3e-143 513.1 469 56.9
QL10p021514 Quercus lobata HOM05D003462 ORTHO05D003946 2.3e-143 513.1 486 55.1
Gorai.006G269300 Gossypium raimondii HOM05D003462 ORTHO05D003946 3.0e-143 512.7 464 57.1
Carub.0002s2077 Capsella rubella HOM05D003462 ORTHO05D003946 4.0e-143 512.3 463 57.2
ClCG06G015340 Citrullus lanatus HOM05D003462 ORTHO05D003946 4.0e-143 512.3 466 56.4
A07p39860 Brassica napus HOM05D003462 ORTHO05D003946 5.2e-143 511.9 466 56.7
PSO478G2116 Papaver somniferum HOM05D003462 ORTHO05D003946 6.7e-143 511.5 470 56.8
AL2G33830 Arabidopsis lyrata HOM05D003462 ORTHO05D003946 8.8e-143 511.1 469 56.5
BraA07t31532Z Brassica rapa HOM05D003462 ORTHO05D003946 8.8e-143 511.1 466 56.4
AT1G73990 Arabidopsis thaliana HOM05D003462 ORTHO05D003946 1.2e-142 510.8 469 56.7
PGR083G2784 Punica granatum HOM05D003462 ORTHO05D003946 2.6e-142 509.6 464 56.9
Hma1.2p1_0744F.1_g211701 Hydrangea macrophylla HOM05D003462 ORTHO05D003946 7.5e-142 508.1 463 56.4
Thhalv10018225m.g Eutrema salsugineum HOM05D003462 ORTHO05D003946 9.7e-142 507.7 466 57.3
SEGI_03657 Sequoiadendron giganteum HOM05D003462 ORTHO05D003946 1.7e-141 506.9 470 56.2
Hund02540 Selenicereus undatus HOM05D003462 ORTHO05D003946 3.7e-141 505.8 508 53.5
Phvul.003G181400 Phaseolus vulgaris HOM05D003462 ORTHO05D003946 6.3e-141 505.0 470 57.2
ATR0691G201 Amborella trichopoda HOM05D003462 ORTHO05D003946 8.2e-141 504.6 481 56.8
VMungo1215G0716 Vigna mungo HOM05D003462 ORTHO05D003946 8.2e-141 504.6 470 57.0
Glyma.17G082700 Glycine max HOM05D003462 ORTHO05D003946 1.8e-140 503.4 463 57.5
TPR.G15309 Trifolium pratense HOM05D003462 ORTHO05D003946 2.4e-140 503.1 466 56.7
Eucgr.K02831 Eucalyptus grandis HOM05D003462 ORTHO05D003946 3.1e-140 502.7 467 57.4
COL.COLO4_28809 Corchorus olitorius HOM05D003462 ORTHO05D003946 5.3e-140 501.9 553 50.3
Hund09973 Selenicereus undatus HOM05D003462 ORTHO05D003946 5.3e-140 501.9 464 56.7
BcaC08g46829 Brassica carinata HOM05D003462 ORTHO05D003946 1.6e-139 500.4 446 58.3
Lj4g0004217 Lotus japonicus HOM05D003462 ORTHO05D003946 1.6e-139 500.4 479 54.9
Lalb_Chr12g0197421 Lupinus albus HOM05D003462 ORTHO05D003946 2.0e-139 500.0 466 56.9
CANSAT80G0024 Cannabis sativa HOM05D003462 ORTHO05D003946 2.7e-139 499.6 465 55.1
ATR0691G062 Amborella trichopoda HOM05D003462 ORTHO05D003946 4.5e-139 498.8 481 55.9
CAN.G982.30 Capsicum annuum HOM05D003462 ORTHO05D003946 4.5e-139 498.8 503 54.5
Zm00001eb189850 Zea mays HOM05D003462 ORTHO05D003946 4.5e-139 498.8 445 58.7
vmacro16468 Vaccinium macrocarpon HOM05D003462 ORTHO05D003946 1.0e-138 497.7 511 53.0
Peaxi162Scf00017g03131 Petunia axillaris HOM05D003462 ORTHO05D003946 2.2e-138 496.5 590 47.8
Potri.015G047500 Populus trichocarpa HOM05D003462 ORTHO05D003946 3.8e-138 495.7 466 55.6
MELO3C017261.2 Cucumis melo HOM05D003462 ORTHO05D003946 8.5e-138 494.6 466 55.2
SGA_v2.0_scaffold171G38939 Striga asiatica HOM05D003462 ORTHO05D003946 1.5e-137 493.8 463 55.9
Lsat_1_v5_gn_5_24941 Lactuca sativa HOM05D003462 ORTHO05D003946 4.2e-137 492.3 467 55.7
Medtr4g112860 Medicago truncatula HOM05D003462 ORTHO05D003946 3.6e-136 489.2 471 54.8
arahy.Tifrunner.gnm1.ann1.MSU6B8 Arachis hypogaea HOM05D003462 ORTHO05D003946 1.0e-135 487.6 466 56.0
CDE06G1115 Ceratophyllum demersum HOM05D003462 ORTHO05D003946 2.3e-135 486.5 441 57.6
TPR.G2020 Trifolium pratense HOM05D003462 ORTHO05D003946 2.3e-135 486.5 466 54.5
ECA246G4431 Erigeron canadensis HOM05D003462 ORTHO05D003946 5.2e-135 485.3 487 53.6
Dinv38623 Davidia involucrata HOM05D003462 ORTHO05D003946 8.8e-135 484.6 469 55.4
arahy.Tifrunner.gnm1.ann1.V9YTQ9 Arachis hypogaea HOM05D003462 ORTHO05D003946 3.7e-133 479.2 466 55.2
Lsat_1_v5_gn_5_24760 Lactuca sativa HOM05D003462 ORTHO05D003946 4.8e-133 478.8 466 54.9
CsaV3_1G003220 Cucumis sativus L. HOM05D003462 ORTHO05D003946 5.9e-131 471.9 434 55.3
HanXRQChr05g0157891 Helianthus annuus HOM05D003462 ORTHO05D003946 7.7e-131 471.5 487 52.4
Duzib084G0277 Durio zibethinus HOM05D003462 ORTHO05D003946 2.9e-130 469.5 419 59.7
FAN08G2364 Fragaria x ananassa HOM05D003462 ORTHO05D003946 2.9e-130 469.5 466 53.9
Atru.chr9.644 Acer truncatum HOM05D003462 ORTHO05D003946 6.6e-130 468.4 517 51.6
unitig_22.g6154 Utricularia gibba HOM05D003462 ORTHO05D003946 8.6e-130 468.0 432 57.9
AUR62036912 Chenopodium quinoa HOM05D003462 ORTHO05D003946 1.1e-129 467.6 417 58.0
Sabra15G0079500 Salix brachista HOM05D003462 ORTHO05D003946 2.5e-129 466.5 518 50.0
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 4.2e-129 465.7 418 58.6
CiPaw.15G117200 Carya illinoinensis HOM05D003462 ORTHO05D003946 9.5e-129 464.5 470 55.7
AUR62032156 Chenopodium quinoa HOM05D003462 ORTHO05D003946 2.1e-128 463.4 447 55.0
Os02g0728100 Oryza sativa ssp. japonica HOM05D003462 ORTHO05D003946 6.8e-127 458.4 477 52.2
Nitab4.5_0000646g0270 Nicotiana tabacum HOM05D003462 ORTHO05D003946 1.5e-126 457.2 506 50.2
Dinv36836 Davidia involucrata HOM05D003462 ORTHO05D003946 1.3e-125 454.1 401 58.9
Psat4g045480 Pisum sativum HOM05D003462 ORTHO05D003946 1.3e-122 444.1 441 52.2
CSS0029569 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 5.0e-122 442.2 464 52.8
Ca_21746_v3 Cicer arietinum L. HOM05D003462 ORTHO05D003946 5.0e-122 442.2 466 51.7
Cfa017729 Carpinus fangiana HOM05D003462 ORTHO05D003946 5.8e-118 428.7 468 50.2
Mapoly0008s0093 Marchantia polymorpha HOM05D003462 ORTHO05D003946 7.5e-118 428.3 461 49.9
Pp3c3_13550 Physcomitrium patens HOM05D003462 ORTHO05D003946 4.6e-115 419.1 498 46.6
Pp3c3_13555 Physcomitrium patens HOM05D003462 ORTHO05D003946 4.6e-115 419.1 498 46.6
CSS0028580 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 4.0e-111 406.0 468 49.6
Haze_18545 Corylus avellana HOM05D003462 ORTHO05D003946 1.7e-109 400.6 779 36.3
AagrBONN_evm.TU.Sc2ySwM_117.3359 Anthoceros agrestis HOM05D003462 ORTHO05D003946 1.1e-108 397.9 489 45.6
HPP92_017961 Vanilla planifolia HOM05D003462 ORTHO05D003946 3.2e-108 396.4 465 47.7
SMO147G0360 Selaginella moellendorffii HOM05D003462 ORTHO05D003946 4.6e-107 392.5 442 47.7
RcHm_v2.0_Chr7g0184031 Rosa chinensis HOM05D003462 ORTHO05D003946 6.8e-103 378.6 470 48.3
Duzib205G0774 Durio zibethinus HOM05D003462 ORTHO05D003946 2.3e-98 363.6 464 44.2
AagrBONN_evm.TU.Sc2ySwM_368.89 Anthoceros agrestis HOM05D003462 ORTHO05D003946 3.1e-95 353.2 493 42.8
QL10p021433 Quercus lobata HOM05D003462 ORTHO05D003946 6.0e-91 339.0 254 69.7
Medtr4g134260 Medicago truncatula HOM05D003462 ORTHO05D003946 3.9e-90 336.3 364 51.1
Actinidia18966 Actinidia chinensis HOM05D003462 ORTHO05D003946 4.4e-86 322.8 345 54.8
Cre10.g444550 Chlamydomonas reinhardtii HOM05D003462 ORTHO05D003946 8.4e-85 318.5 470 41.5
Glyma.06G207100 Glycine max HOM05D003462 ORTHO05D003946 1.0e-74 285.0 216 69.0
Medtr4g112820 Medicago truncatula HOM05D003462 ORTHO05D003946 1.8e-74 284.3 466 38.4
Oeu031925.1 Olea europaea HOM05D003462 ORTHO05D003946 1.5e-70 271.2 469 37.1
HanXRQChr05g0157881 Helianthus annuus HOM05D003462 ORTHO05D003946 3.4e-70 270.0 368 41.3
GSVIVG01008180001 Vitis vinifera HOM05D003462 ORTHO05D003946 3.4e-70 270.0 254 53.1
GSVIVG01008179001 Vitis vinifera HOM05D003462 ORTHO05D003946 2.5e-68 263.8 196 70.9
AUR62044517 Chenopodium quinoa HOM05D003462 ORTHO05D003946 2.1e-64 250.8 194 68.0
Medtr5g025810 Medicago truncatula HOM05D003462 ORTHO05D003946 1.5e-57 228.0 365 37.5
Medtr4g130360 Medicago truncatula HOM05D003462 ORTHO05D003946 5.7e-57 226.1 321 42.1
CSS0043104 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 5.0e-53 213.0 140 77.1
Oeu012971.1 Olea europaea HOM05D003462 ORTHO05D003946 7.9e-51 205.7 132 72.0
Oeu031926.1 Olea europaea HOM05D003462 ORTHO05D003946 7.2e-44 182.6 117 81.2
CSS0003044 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 2.1e-43 181.0 187 49.2
CSS0030762 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 4.7e-43 179.9 123 75.6
CSS0043842 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 5.1e-42 176.4 117 76.9
TPR.G1988 Trifolium pratense HOM05D003462 ORTHO05D003946 2.0e-41 174.5 254 37.4
HanXRQChr09g0240811 Helianthus annuus HOM05D003462 ORTHO05D003946 2.6e-41 174.1 181 55.2
Medtr4g123500 Medicago truncatula HOM05D003462 ORTHO05D003946 3.3e-41 173.7 415 32.3
FAN18G1391 Fragaria x ananassa HOM05D003462 ORTHO05D003946 1.3e-40 171.8 171 59.1
FAN13G0008 Fragaria x ananassa HOM05D003462 ORTHO05D003946 4.8e-40 169.9 120 75.0
Medtr8g022500 Medicago truncatula HOM05D003462 ORTHO05D003946 1.2e-38 165.2 358 35.8
SEGI_21155 Sequoiadendron giganteum HOM05D003462 ORTHO05D003946 2.0e-38 164.5 293 36.2
Medtr5g082990 Medicago truncatula HOM05D003462 ORTHO05D003946 1.0e-37 162.2 194 49.0
FvH4_5g13111 Fragaria vesca HOM05D003462 ORTHO05D003946 2.5e-36 157.5 274 33.9
CSS0035896 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 8.8e-34 149.1 100 76.0
Actinidia01422 Actinidia chinensis HOM05D003462 ORTHO05D003946 7.4e-33 146.0 100 75.0
Medtr4g114810 Medicago truncatula HOM05D003462 ORTHO05D003946 6.3e-32 142.9 396 30.8
HanXRQChr09g0240321 Helianthus annuus HOM05D003462 ORTHO05D003946 1.4e-31 141.7 181 46.4
CBR_g31190 Chara braunii HOM05D003462 ORTHO05D003946 1.2e-30 138.7 92 72.8
QL10p021440 Quercus lobata HOM05D003462 ORTHO05D003946 5.7e-25 119.8 118 45.8
RcHm_v2.0_Chr6g0264331 Rosa chinensis HOM05D003462 ORTHO05D003946 9.7e-25 119.0 81 77.8
Cre06.g267700 Chlamydomonas reinhardtii HOM05D003462 ORTHO05D003946 2.8e-24 117.5 185 40.0
CSS0043461 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 3.1e-23 114.0 87 66.7
ECA236G4192 Erigeron canadensis HOM05D003462 ORTHO05D003946 5.3e-23 113.2 77 72.7
Medtr8g022470 Medicago truncatula HOM05D003462 ORTHO05D003946 1.7e-21 108.2 162 43.8
Ca_29357_v3 Cicer arietinum L. HOM05D003462 ORTHO05D003946 6.5e-21 106.3 412 25.0
RcHm_v2.0_Chr2g0126491 Rosa chinensis HOM05D003462 ORTHO05D003946 2.5e-20 104.4 117 56.4
Medtr5g083090 Medicago truncatula HOM05D003462 ORTHO05D003946 5.5e-20 103.2 121 47.9
COL.COLO4_01124 Corchorus olitorius HOM05D003462 ORTHO05D003946 2.3e-18 97.8 161 37.3
TPR.G35192 Trifolium pratense HOM05D003462 ORTHO05D003946 4.0e-18 97.1 76 65.8
Medtr4g130550 Medicago truncatula HOM05D003462 ORTHO05D003946 8.8e-18 95.9 149 39.6
Medtr5g083100 Medicago truncatula HOM05D003462 ORTHO05D003946 1.5e-17 95.1 129 42.6
FvH4_5g13112 Fragaria vesca HOM05D003462 ORTHO05D003946 7.5e-17 92.8 140 42.9
AUR62039689 Chenopodium quinoa HOM05D003462 ORTHO05D003946 1.1e-15 89.0 66 66.7
Rhsim08G0140500 Rhododendron simsii HOM05D003462 ORTHO05D003946 2.0e-14 84.7 63 66.7
GSVIVG01008177001 Vitis vinifera HOM05D003462 ORTHO05D003946 5.9e-14 83.2 65 66.2
Cc00_g05440 Coffea canephora HOM05D003462 ORTHO05D003946 1.0e-13 82.4 87 58.6
Medtr4g133130 Medicago truncatula HOM05D000348 ORTHO05D003946 1.0e-13 82.4 136 46.3
Duzib205G0393 Durio zibethinus HOM05D003462 ORTHO05D003946 5.0e-13 80.1 71 52.1
RcHm_v2.0_Chr2g0152701 Rosa chinensis HOM05D003462 ORTHO05D003946 7.2e-12 76.3 51 80.4
Cre06.g251550 Chlamydomonas reinhardtii HOM05D003462 ORTHO05D003946 1.2e-11 75.5 90 45.6
RcHm_v2.0_Chr6g0264341 Rosa chinensis HOM05D003462 ORTHO05D003946 3.6e-11 73.9 85 45.9
PRCOL_00001689 Prasinoderma coloniale HOM05D003462 ORTHO05D003946 1.8e-10 71.6 155 32.9
Actinidia27195 Actinidia chinensis HOM05D003462 ORTHO05D003946 8.3e-08 62.8 100 42.0
Glyma.05G017301 Glycine max HOM05D003462 ORTHO05D003946 1.6e-06 58.5 37 67.6


User provided reference genes

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