Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g14063 Utricularia gibba HOM05D000520 ORTHO05D000399 1.6e-91 339.3 161 100.0
TAR362G0969 Trochodendron aralioides HOM05D000520 ORTHO05D000399 5.2e-10 68.6 55 60.0
TAR633G0222 Trochodendron aralioides HOM05D002055 ORTHO05D002120 5.2e-10 68.6 54 61.1
Oeu060380.1 Olea europaea HOM05D000520 ORTHO05D000399 8.8e-10 67.8 63 57.1
Oeu042784.1 Olea europaea HOM05D000520 ORTHO05D000399 1.1e-09 67.4 62 54.8
Sabra13G0026500 Salix brachista HOM05D000520 ORTHO05D000399 2.0e-09 66.6 59 52.5
unitig_748.g8346 Utricularia gibba HOM05D000520 ORTHO05D000399 3.3e-09 65.9 68 51.5
Actinidia40190 Actinidia chinensis HOM05D000520 ORTHO05D000399 5.7e-09 65.1 59 55.9
Oeu030984.1 Olea europaea HOM05D000520 ORTHO05D000399 5.7e-09 65.1 62 53.2
QL03p004617 Quercus lobata HOM05D000520 ORTHO05D000399 9.7e-09 64.3 58 53.4
Hma1.2p1_1037F.1_g250580 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 1.3e-08 63.9 68 50.0
Manes.15G023400 Manihot esculenta HOM05D000520 ORTHO05D000399 1.3e-08 63.9 62 50.0
MSTRG.21833 Avicennia marina HOM05D000520 ORTHO05D000399 2.2e-08 63.2 61 54.1
Carub.0006s1741 Capsella rubella HOM05D000520 ORTHO05D000399 2.2e-08 63.2 67 46.3
Lj3C779T2 Lonicera japonica HOM05D000520 ORTHO05D000399 2.2e-08 63.2 64 50.0
Manes.03G184400 Manihot esculenta HOM05D000520 ORTHO05D000399 2.2e-08 63.2 60 51.7
Nn1g02168 Nelumbo nucifera HOM05D000520 ORTHO05D000399 2.2e-08 63.2 53 56.6
Dinv40265 Davidia involucrata HOM05D000520 ORTHO05D000399 3.7e-08 62.4 56 53.6
Aa31LG11G10640 Aethionema arabicum HOM05D000520 ORTHO05D000399 4.8e-08 62.0 69 44.9
Actinidia00088 Actinidia chinensis HOM05D000520 ORTHO05D000399 6.3e-08 61.6 57 54.4
Thhalv10013101m.g Eutrema salsugineum HOM05D000520 ORTHO05D000399 6.3e-08 61.6 70 44.3
MSTRG.24755 Avicennia marina HOM05D000520 ORTHO05D000399 8.2e-08 61.2 62 54.8
CiPaw.02G092700 Carya illinoinensis HOM05D000520 ORTHO05D000399 8.2e-08 61.2 59 50.8
Sed0025184 Sechium edule HOM05D000520 ORTHO05D000399 8.2e-08 61.2 58 48.3
Potri.013G025300 Populus trichocarpa HOM05D000520 ORTHO05D000399 1.1e-07 60.8 58 53.4
MSTRG.10015 Avicennia marina HOM05D000520 ORTHO05D000399 1.4e-07 60.5 68 47.1
ClCG03G016850 Citrullus lanatus HOM05D000520 ORTHO05D000399 1.4e-07 60.5 58 48.3
CsaV3_1G039090 Cucumis sativus L. HOM05D000520 ORTHO05D000399 1.4e-07 60.5 58 48.3
THA.LOC104822309 Tarenaya hassleriana HOM05D000520 ORTHO05D000399 1.4e-07 60.5 71 43.7
CARHR193900 Cardamine hirsuta HOM05D000520 ORTHO05D000399 1.8e-07 60.1 71 42.3
SGA_v2.0_scaffold39G15363 Striga asiatica HOM05D000520 ORTHO05D000399 1.8e-07 60.1 64 50.0
Potri.005G036300 Populus trichocarpa HOM05D000520 ORTHO05D000399 2.4e-07 59.7 57 47.4
MD16G1184300 Malus domestica HOM05D000520 ORTHO05D000399 3.1e-07 59.3 62 48.4
Oeu042424.1 Olea europaea HOM05D000520 ORTHO05D000399 3.1e-07 59.3 65 47.7
PGR004G1850 Punica granatum HOM05D000520 ORTHO05D000399 3.1e-07 59.3 68 45.6
QL03p004799 Quercus lobata HOM05D002900 ORTHO05D003238 3.1e-07 59.3 54 55.6
Sp6g25290 Schrenkiella parvula HOM05D000520 ORTHO05D000399 3.1e-07 59.3 69 43.5
TAR365G1251 Trochodendron aralioides HOM05D000520 ORTHO05D000399 3.1e-07 59.3 71 47.9
Thhalv10020810m.g Eutrema salsugineum HOM05D000520 ORTHO05D000399 4.1e-07 58.9 68 41.2
Sabra08G0158700 Salix brachista HOM05D000520 ORTHO05D000399 4.1e-07 58.9 65 44.6
TAR636G3323 Trochodendron aralioides HOM05D000520 ORTHO05D000399 4.1e-07 58.9 64 50.0
Aa31LG5G16650 Aethionema arabicum HOM05D000520 ORTHO05D000399 5.3e-07 58.5 72 43.1
AT5G19090 Arabidopsis thaliana HOM05D000520 ORTHO05D000399 5.3e-07 58.5 73 39.7
MSTRG.3996 Avicennia marina HOM05D000520 ORTHO05D000399 5.3e-07 58.5 66 50.0
C05p61130 Brassica napus HOM05D000520 ORTHO05D000399 5.3e-07 58.5 69 43.5
BolC5t34771H Brassica oleracea HOM05D000520 ORTHO05D000399 5.3e-07 58.5 69 43.5
DCAR_027154 Daucus carota HOM05D000520 ORTHO05D000399 5.3e-07 58.5 59 52.5
AL6G30480 Arabidopsis lyrata HOM05D000520 ORTHO05D000399 7.0e-07 58.2 71 40.8
A05p41870 Brassica napus HOM05D000520 ORTHO05D000399 7.0e-07 58.2 68 44.1
BraA05t22906Z Brassica rapa HOM05D000520 ORTHO05D000399 7.0e-07 58.2 68 44.1
Sed0003129 Sechium edule HOM05D000520 ORTHO05D000399 7.0e-07 58.2 57 45.6
AL3G16980 Arabidopsis lyrata HOM05D000520 ORTHO05D000399 9.1e-07 57.8 69 43.5
CSS0016617 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 9.1e-07 57.8 56 50.0
Migut.G00268 Erythranthe guttata HOM05D000520 ORTHO05D000399 9.1e-07 57.8 59 50.8
Hma1.2p1_0511F.1_g169070 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 9.1e-07 57.8 54 53.7
Phvul.006G153400 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 9.1e-07 57.8 59 49.2
Sp3g05080 Schrenkiella parvula HOM05D000520 ORTHO05D000399 9.1e-07 57.8 70 41.4
Hund12193 Selenicereus undatus HOM05D000520 ORTHO05D000399 9.1e-07 57.8 55 56.4
BcaC04g18611 Brassica carinata HOM05D000520 ORTHO05D000399 1.2e-06 57.4 69 40.6
C09p57300 Brassica napus HOM05D000520 ORTHO05D000399 1.2e-06 57.4 69 40.6
BolC9t58600H Brassica oleracea HOM05D000520 ORTHO05D000399 1.2e-06 57.4 69 40.6
Carub.0003s0556 Capsella rubella HOM05D000520 ORTHO05D000399 1.2e-06 57.4 71 42.3
FvH4_4g14520 Fragaria vesca HOM05D000520 ORTHO05D000399 1.2e-06 57.4 60 48.3
FAN12G0085 Fragaria x ananassa HOM05D000520 ORTHO05D000399 1.2e-06 57.4 60 48.3
Aqoxy2G03274 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 1.6e-06 57.0 54 50.0
A10p20600 Brassica napus HOM05D000520 ORTHO05D000399 1.6e-06 57.0 69 40.6
BraA10t44122Z Brassica rapa HOM05D000520 ORTHO05D000399 1.6e-06 57.0 69 40.6
Duzib212G0287 Durio zibethinus HOM05D000520 ORTHO05D000399 1.6e-06 57.0 61 50.8
AT3G06130 Arabidopsis thaliana HOM05D000520 ORTHO05D000399 2.0e-06 56.6 73 41.1
FAN22G0660 Fragaria x ananassa HOM05D000520 ORTHO05D000399 2.0e-06 56.6 60 50.0
Prupe.1G151700 Prunus persica HOM05D000520 ORTHO05D000399 2.0e-06 56.6 63 47.6
SGA_v2.0_scaffold237G43821 Striga asiatica HOM05D000520 ORTHO05D000399 2.0e-06 56.6 60 51.7
Actinidia08516 Actinidia chinensis HOM05D000520 ORTHO05D000399 2.6e-06 56.2 54 51.9
BcaB05g23361 Brassica carinata HOM05D000520 ORTHO05D000399 2.6e-06 56.2 69 40.6
BcaC03g13633 Brassica carinata HOM05D000520 ORTHO05D000399 2.6e-06 56.2 69 40.6
A02p05190 Brassica napus HOM05D000520 ORTHO05D000399 2.6e-06 56.2 69 40.6
C02p10270 Brassica napus HOM05D000520 ORTHO05D000399 2.6e-06 56.2 69 40.6
BolC2t06934H Brassica oleracea HOM05D000520 ORTHO05D000399 2.6e-06 56.2 69 40.6
BraA02t05479Z Brassica rapa HOM05D000520 ORTHO05D000399 2.6e-06 56.2 69 40.6
ECA240G2947 Erigeron canadensis HOM05D000520 ORTHO05D000399 2.6e-06 56.2 61 50.8
Glyma.07G257300 Glycine max HOM05D000520 ORTHO05D000399 2.6e-06 56.2 53 52.8
Glyma.17G016800 Glycine max HOM05D000520 ORTHO05D000399 2.6e-06 56.2 53 52.8
CANSAT54G1951 Cannabis sativa HOM05D000520 ORTHO05D000399 3.5e-06 55.8 53 50.9
Cpa.g.sc16.22 Carica papaya HOM05D000520 ORTHO05D000399 3.5e-06 55.8 64 48.4
Glyma.13G208400 Glycine max HOM05D000520 ORTHO05D000399 3.5e-06 55.8 59 47.5
BcaB08g36614 Brassica carinata HOM05D000520 ORTHO05D000399 4.5e-06 55.5 69 40.6
CiPaw.07G015400 Carya illinoinensis HOM05D000520 ORTHO05D000399 4.5e-06 55.5 59 50.8
Duzib151G0073 Durio zibethinus HOM05D000520 ORTHO05D000399 4.5e-06 55.5 61 47.5
FAN07G0772 Fragaria x ananassa HOM05D000520 ORTHO05D000399 4.5e-06 55.5 61 47.5
Manes.09G164500 Manihot esculenta HOM05D000520 ORTHO05D000399 4.5e-06 55.5 53 50.9
Rhsim04G0206800 Rhododendron simsii HOM05D000520 ORTHO05D000399 4.5e-06 55.5 59 47.5
CAN.G1132.7 Capsicum annuum HOM05D000520 ORTHO05D000399 5.9e-06 55.1 57 52.6
FAN17G1094 Fragaria x ananassa HOM05D000520 ORTHO05D000399 5.9e-06 55.1 61 47.5
PGR006G0001 Punica granatum HOM05D000520 ORTHO05D000399 5.9e-06 55.1 58 53.4
PGR083G1402 Punica granatum HOM05D000520 ORTHO05D000399 5.9e-06 55.1 58 53.4
SalBow5G3417 Salvia bowleyana HOM05D000520 ORTHO05D000399 5.9e-06 55.1 57 50.9
SalBow5G3772 Salvia bowleyana HOM05D000520 ORTHO05D000399 5.9e-06 55.1 57 50.9
Ciclev10004709m.g Citrus clementina HOM05D000520 ORTHO05D000399 7.7e-06 54.7 64 46.9
Dinv44482 Davidia involucrata HOM05D000520 ORTHO05D000399 7.7e-06 54.7 59 47.5
Manes.08G122800 Manihot esculenta HOM05D000520 ORTHO05D000399 7.7e-06 54.7 58 48.3
TWI73G0943 Tripterygium wilfordii HOM05D000520 ORTHO05D000399 7.7e-06 54.7 75 42.7


User provided reference genes

Program Settings