Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 2.8e-103 378.6 191 100.0
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 4.8e-71 271.6 191 73.3
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 1.8e-70 269.6 191 72.3
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 1.7e-68 263.1 189 70.4
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 1.3e-65 253.4 182 70.3
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 5.1e-65 251.5 186 66.1
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 2.5e-64 249.2 165 74.5
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 3.3e-64 248.8 188 66.0
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.6e-63 246.5 176 69.9
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 2.8e-63 245.7 193 64.8
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 6.2e-63 244.6 185 67.6
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 3.1e-62 242.3 165 72.7
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 3.1e-62 242.3 185 63.8
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 3.1e-62 242.3 175 68.6
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 6.9e-62 241.1 176 67.6
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.5e-61 240.0 176 68.2
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.0e-61 239.6 183 63.9
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 3.4e-61 238.8 176 67.6
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 3.4e-61 238.8 176 68.2
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 4.5e-61 238.4 176 65.9
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 4.5e-61 238.4 183 63.4
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 4.5e-61 238.4 187 63.6
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 4.5e-61 238.4 182 65.9
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 7.6e-61 237.7 179 65.9
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 1.3e-60 236.9 183 65.0
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 1.3e-60 236.9 180 65.0
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 1.7e-60 236.5 176 68.8
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.7e-60 236.5 180 66.7
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 2.2e-60 236.1 181 66.3
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 2.2e-60 236.1 186 62.9
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.2e-60 236.1 166 67.5
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.9e-60 235.7 176 65.9
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 3.8e-60 235.3 166 68.1
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 4.9e-60 235.0 166 69.9
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 8.4e-60 234.2 167 68.3
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 8.4e-60 234.2 175 66.9
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.1e-59 233.8 180 65.0
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.1e-59 233.8 179 67.6
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 1.9e-59 233.0 177 64.4
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 1.9e-59 233.0 179 67.0
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 2.4e-59 232.6 179 66.5
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 2.4e-59 232.6 179 65.9
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 3.2e-59 232.3 176 67.6
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 3.2e-59 232.3 170 67.1
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 4.2e-59 231.9 174 61.5
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 5.5e-59 231.5 179 66.5
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 5.5e-59 231.5 184 66.8
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 5.5e-59 231.5 184 62.5
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 5.5e-59 231.5 189 61.9
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 7.1e-59 231.1 185 64.3
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 1.2e-58 230.3 174 66.1
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 2.1e-58 229.6 181 65.7
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 2.1e-58 229.6 181 65.7
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 3.5e-58 228.8 188 60.6
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 4.6e-58 228.4 191 59.7
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 6.0e-58 228.0 181 65.2
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 1.0e-57 227.3 176 64.8
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 1.8e-57 226.5 181 63.5
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 2.3e-57 226.1 181 64.1
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 5.1e-57 224.9 172 64.5
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 8.7e-57 224.2 173 63.0
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 8.7e-57 224.2 174 64.9
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 8.7e-57 224.2 169 66.3
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 1.1e-56 223.8 180 63.9
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 7.4e-56 221.1 172 63.4
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 7.4e-56 221.1 181 60.8
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 7.4e-56 221.1 173 61.8
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 7.4e-56 221.1 152 70.4
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 9.6e-56 220.7 186 62.9
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 1.6e-55 219.9 173 63.0
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 2.8e-55 219.2 178 63.5
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 2.8e-55 219.2 149 76.5
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 4.8e-55 218.4 173 64.2
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 8.1e-55 217.6 173 62.4
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.4e-54 216.9 164 65.2
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 4.0e-54 215.3 162 63.6
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 4.0e-54 215.3 162 63.6
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 6.9e-54 214.5 143 69.2
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 9.0e-54 214.2 162 63.0
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 9.0e-54 214.2 162 63.0
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 1.2e-53 213.8 183 64.5
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.2e-53 213.8 162 63.0
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 1.5e-53 213.4 174 59.2
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 2.6e-53 212.6 183 63.9
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.0e-52 210.7 174 59.2
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 3.2e-51 205.7 141 68.8
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 4.2e-51 205.3 247 47.0
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 8.7e-49 197.6 136 71.3
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 2.5e-48 196.1 188 53.2
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 1.1e-46 190.7 131 71.0
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 4.1e-46 188.7 139 69.8
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 1.4e-43 180.3 139 64.7
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 3.2e-43 179.1 193 48.7
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.3e-41 173.7 178 53.9
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 2.8e-39 166.0 124 66.1
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.7e-39 165.6 151 51.0
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 6.9e-38 161.4 200 48.5
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 7.2e-35 151.4 162 53.1
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 2.1e-34 149.8 150 54.0
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 2.0e-29 133.3 171 42.7
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 3.3e-24 115.9 85 63.5
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 9.7e-24 114.4 186 34.4
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 2.2e-23 113.2 104 60.6
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 4.1e-22 109.0 124 48.4
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.2e-21 107.5 90 57.8
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 8.5e-20 101.3 73 64.4
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.5e-19 100.5 163 41.1
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 5.7e-16 88.6 140 35.7
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 3.7e-15 85.9 74 55.4
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 1.0e-12 77.8 60 55.0
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 4.0e-09 65.9 41 75.6
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.7e-07 60.5 93 37.6
CBR_g32467 Chara braunii HOM05D007018 ORTHO05D008887 1.1e-06 57.8 85 34.1


User provided reference genes

Program Settings