Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g13819 Utricularia gibba HOM05D004800 ORTHO05D005842 1.9e-116 422.5 217 100.0
MSTRG.25830 Avicennia marina HOM05D004800 ORTHO05D005842 1.9e-76 289.7 212 70.3
SGA_v2.0_scaffold147G36341 Striga asiatica HOM05D004800 ORTHO05D005842 9.8e-73 277.3 217 67.3
Migut.A00358 Erythranthe guttata HOM05D004800 ORTHO05D005842 3.7e-72 275.4 214 68.7
SalBow4G3208 Salvia bowleyana HOM05D004800 ORTHO05D005842 4.9e-72 275.0 209 68.9
Oeu001621.3 Olea europaea HOM05D004800 ORTHO05D005842 2.4e-71 272.7 209 66.5
Oeu009650.1 Olea europaea HOM05D004800 ORTHO05D005842 7.8e-70 267.7 209 66.5
Dinv13413 Davidia involucrata HOM05D004800 ORTHO05D005842 6.0e-62 241.5 205 60.5
unitig_26.g9784 Utricularia gibba HOM05D004800 ORTHO05D005842 2.3e-61 239.6 204 66.2
CSS0020729 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 3.9e-61 238.8 203 60.6
CSS0041988 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 3.9e-61 238.8 203 60.6
Lj7A735T34 Lonicera japonica HOM05D004800 ORTHO05D005842 6.6e-61 238.0 202 59.9
Dinv08182 Davidia involucrata HOM05D004800 ORTHO05D005842 2.5e-60 236.1 198 60.6
DCAR_022862 Daucus carota HOM05D004800 ORTHO05D005842 2.0e-57 226.5 196 60.2
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla HOM05D004800 ORTHO05D005842 2.0e-57 226.5 206 55.8
Thecc.09G015200 Theobroma cacao HOM05D004800 ORTHO05D005842 2.0e-57 226.5 201 58.7
Gorai.009G063300 Gossypium raimondii HOM05D004800 ORTHO05D005842 5.8e-57 224.9 206 58.3
Duzib168G1619 Durio zibethinus HOM05D004800 ORTHO05D005842 7.6e-57 224.6 204 57.8
Peaxi162Scf00006g00249 Petunia axillaris HOM05D004800 ORTHO05D005842 7.6e-57 224.6 215 54.0
Rhsim07G0165700 Rhododendron simsii HOM05D004800 ORTHO05D005842 1.3e-56 223.8 191 58.1
COL.COLO4_18955 Corchorus olitorius HOM05D004800 ORTHO05D005842 1.7e-56 223.4 200 58.5
Gohir.D05G062200 Gossypium hirsutum HOM05D004800 ORTHO05D005842 3.8e-56 222.2 206 57.3
vmacro05151 Vaccinium macrocarpon HOM05D004800 ORTHO05D005842 8.4e-56 221.1 185 61.1
Cc08_g07200 Coffea canephora HOM05D004800 ORTHO05D005842 3.2e-55 219.2 201 56.2
Gohir.A05G060000 Gossypium hirsutum HOM05D004800 ORTHO05D005842 4.2e-55 218.8 206 57.3
Prupe.1G394400 Prunus persica HOM05D004800 ORTHO05D005842 4.2e-55 218.8 206 54.9
Nitab4.5_0010613g0010 Nicotiana tabacum HOM05D004800 ORTHO05D005842 9.3e-55 217.6 218 55.0
CSS0021373 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 4.6e-54 215.3 187 59.4
TAR625G0162 Trochodendron aralioides HOM05D004800 ORTHO05D005842 2.3e-53 213.0 198 56.1
Ciclev10009140m.g Citrus clementina HOM05D004800 ORTHO05D005842 3.9e-53 212.2 197 55.3
Solyc07g008750.4 Solanum lycopersicum HOM05D004800 ORTHO05D005842 3.9e-53 212.2 214 53.3
Cpa.g.sc148.17 Carica papaya HOM05D004800 ORTHO05D005842 6.6e-53 211.5 200 57.5
Sopen07g004690 Solanum pennellii HOM05D004800 ORTHO05D005842 8.7e-53 211.1 204 55.4
FAN27G0477 Fragaria x ananassa HOM05D004800 ORTHO05D005842 1.1e-52 210.7 205 54.6
HanXRQChr13g0411011 Helianthus annuus HOM05D004800 ORTHO05D005842 1.1e-52 210.7 202 52.5
Manes.03G008100 Manihot esculenta HOM05D004800 ORTHO05D005842 1.1e-52 210.7 197 54.8
TAR625G0311 Trochodendron aralioides HOM05D004800 ORTHO05D005842 1.1e-52 210.7 198 55.6
Lsat_1_v5_gn_5_49760 Lactuca sativa HOM05D004800 ORTHO05D005842 1.9e-52 209.9 200 54.5
RcHm_v2.0_Chr6g0299361 Rosa chinensis HOM05D004800 ORTHO05D005842 1.9e-52 209.9 213 53.1
CAN.G333.3 Capsicum annuum HOM05D004800 ORTHO05D005842 2.5e-52 209.5 216 52.8
Haze_21408 Corylus avellana HOM05D004800 ORTHO05D005842 2.5e-52 209.5 197 55.3
FAN20G2958 Fragaria x ananassa HOM05D004800 ORTHO05D005842 2.5e-52 209.5 199 55.3
Actinidia14132 Actinidia chinensis HOM05D004800 ORTHO05D005842 3.3e-52 209.1 201 56.7
Manes.16G130200 Manihot esculenta HOM05D004800 ORTHO05D005842 5.6e-52 208.4 197 54.8
Cfa013047 Carpinus fangiana HOM05D004800 ORTHO05D005842 9.6e-52 207.6 197 55.3
PGSC0003DMG401028727 Solanum tuberosum HOM05D004800 ORTHO05D005842 9.6e-52 207.6 214 52.8
AUR62024801 Chenopodium quinoa HOM05D004800 ORTHO05D005842 1.3e-51 207.2 215 52.1
FvH4_2g41170 Fragaria vesca HOM05D004800 ORTHO05D005842 1.3e-51 207.2 211 52.6
Atru.chr7.2559 Acer truncatum HOM05D004800 ORTHO05D005842 8.1e-51 204.5 201 53.2
TWI34G0615 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 8.1e-51 204.5 190 53.7
AUR62032420 Chenopodium quinoa HOM05D004800 ORTHO05D005842 1.8e-50 203.4 215 51.6
Sed0002840 Sechium edule HOM05D004800 ORTHO05D005842 1.8e-50 203.4 199 51.3
BcaNung03198 Brassica carinata HOM05D004800 ORTHO05D005842 4.0e-50 202.2 208 51.4
A06p35840 Brassica napus HOM05D004800 ORTHO05D005842 5.3e-50 201.8 199 52.8
BraA06t26509Z Brassica rapa HOM05D004800 ORTHO05D005842 5.3e-50 201.8 199 52.8
TWI32G1317 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 1.5e-49 200.3 189 54.5
Actinidia23108 Actinidia chinensis HOM05D004800 ORTHO05D005842 2.6e-49 199.5 206 53.9
Sp2g22450 Schrenkiella parvula HOM05D004800 ORTHO05D005842 2.6e-49 199.5 205 50.2
BcaNung02298 Brassica carinata HOM05D004800 ORTHO05D005842 3.4e-49 199.1 198 51.5
Hund02986 Selenicereus undatus HOM05D004800 ORTHO05D005842 4.5e-49 198.7 201 54.2
QL02p018802 Quercus lobata HOM05D004800 ORTHO05D005842 5.8e-49 198.4 197 52.3
Sc09g0010680 Simmondsia chinensis HOM05D004800 ORTHO05D005842 9.9e-49 197.6 195 52.3
Lj1g0022737 Lotus japonicus HOM05D004800 ORTHO05D005842 1.3e-48 197.2 199 53.3
Potri.006G264700 Populus trichocarpa HOM05D004800 ORTHO05D005842 2.9e-48 196.1 201 51.2
Ca_15781_v3 Cicer arietinum L. HOM05D004800 ORTHO05D005842 4.9e-48 195.3 196 52.6
PGR044G1902 Punica granatum HOM05D004800 ORTHO05D005842 1.4e-47 193.7 200 50.5
GSVIVG01035974001 Vitis vinifera HOM05D004800 ORTHO05D005842 1.4e-47 193.7 178 56.2
TPR.G1887 Trifolium pratense HOM05D004800 ORTHO05D005842 3.2e-47 192.6 199 49.7
CANSAT25G3039 Cannabis sativa HOM05D004800 ORTHO05D005842 4.2e-47 192.2 196 50.5
Psat5g033480 Pisum sativum HOM05D004800 ORTHO05D005842 5.4e-47 191.8 196 50.0
THA.LOC104814986 Tarenaya hassleriana HOM05D004800 ORTHO05D005842 5.4e-47 191.8 201 49.3
EL10Ac2g02494 Beta vulgaris HOM05D004800 ORTHO05D005842 2.1e-46 189.9 206 51.0
Eucgr.L02918 Eucalyptus grandis HOM05D004800 ORTHO05D005842 2.1e-46 189.9 188 53.2
PSO339G1021 Papaver somniferum HOM05D004800 ORTHO05D005842 3.5e-46 189.1 199 52.8
AT5G25080 Arabidopsis thaliana HOM05D004800 ORTHO05D005842 4.6e-46 188.7 201 47.8
C07p42740 Brassica napus HOM05D004800 ORTHO05D005842 6.0e-46 188.3 221 46.6
PSO384G2235 Papaver somniferum HOM05D004800 ORTHO05D005842 7.9e-46 188.0 197 52.8
Medtr3g105925 Medicago truncatula HOM05D004800 ORTHO05D005842 1.3e-45 187.2 210 48.6
Sabra06G0206800 Salix brachista HOM05D004800 ORTHO05D005842 2.3e-45 186.4 194 50.5
BolC7t44804H Brassica oleracea HOM05D004800 ORTHO05D005842 3.0e-45 186.0 221 46.2
Sabra18G0021000 Salix brachista HOM05D004800 ORTHO05D005842 3.0e-45 186.0 203 49.8
CiPaw.08G005800 Carya illinoinensis HOM05D004800 ORTHO05D005842 3.9e-45 185.7 190 50.0
BcaNung06718 Brassica carinata HOM05D004800 ORTHO05D005842 1.1e-44 184.1 183 53.0
MD08G1055900 Malus domestica HOM05D004800 ORTHO05D005842 1.1e-44 184.1 205 47.3
VMungo1309G1055 Vigna mungo HOM05D004800 ORTHO05D005842 1.1e-44 184.1 196 49.5
Phvul.009G086600 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 1.9e-44 183.3 196 49.5
Eucgr.C02606 Eucalyptus grandis HOM05D004800 ORTHO05D005842 2.5e-44 183.0 188 51.6
AL6G36710 Arabidopsis lyrata HOM05D004800 ORTHO05D005842 3.3e-44 182.6 213 46.0
CsaV3_4G036490 Cucumis sativus L. HOM05D004800 ORTHO05D005842 3.3e-44 182.6 199 47.7
BcaC04g23570 Brassica carinata HOM05D004800 ORTHO05D005842 4.3e-44 182.2 204 48.0
C09p07000 Brassica napus HOM05D004800 ORTHO05D005842 4.3e-44 182.2 204 48.0
HPP92_017174 Vanilla planifolia HOM05D004800 ORTHO05D005842 1.6e-43 180.3 211 46.4
A09p06310 Brassica napus HOM05D004800 ORTHO05D005842 3.6e-43 179.1 214 46.7
BraA09t36276Z Brassica rapa HOM05D004800 ORTHO05D005842 3.6e-43 179.1 214 46.7
Carub.0006s2291 Capsella rubella HOM05D004800 ORTHO05D005842 3.6e-43 179.1 202 46.5
ClCG05G016220 Citrullus lanatus HOM05D004800 ORTHO05D005842 1.4e-42 177.2 198 47.5
MELO3C016954.2 Cucumis melo HOM05D004800 ORTHO05D005842 1.8e-42 176.8 199 46.2
ATR0580G220 Amborella trichopoda HOM05D004800 ORTHO05D005842 4.0e-42 175.6 202 45.5
Thhalv10004902m.g Eutrema salsugineum HOM05D004800 ORTHO05D005842 9.0e-42 174.5 210 45.2
BolC9t53616H Brassica oleracea HOM05D004800 ORTHO05D005842 7.6e-41 171.4 203 45.8
CARHR188420 Cardamine hirsuta HOM05D004800 ORTHO05D005842 9.9e-41 171.0 197 45.2
Aqoxy7G03382 Aquilegia oxysepala HOM05D004800 ORTHO05D005842 2.9e-40 169.5 203 47.3
Aa31LG11G4300 Aethionema arabicum HOM05D004800 ORTHO05D005842 7.1e-39 164.9 188 45.2
CANSAT35G0701 Cannabis sativa HOM05D004800 ORTHO05D005842 3.5e-38 162.5 191 47.6
Os08g0270200 Oryza sativa ssp. japonica HOM05D004800 ORTHO05D005842 1.8e-37 160.2 198 44.9
Glyma.06G061100 Glycine max HOM05D004800 ORTHO05D005842 3.0e-37 159.5 196 44.9
CDE02G3876 Ceratophyllum demersum HOM05D004800 ORTHO05D005842 5.1e-37 158.7 191 47.6
SHI21074 Sapria himalayana HOM05D004800 ORTHO05D005842 5.1e-37 158.7 215 44.7
ECA240G1139 Erigeron canadensis HOM05D004800 ORTHO05D005842 2.5e-36 156.4 140 53.6
Lalb_Chr11g0063501 Lupinus albus HOM05D004800 ORTHO05D005842 2.5e-36 156.4 164 50.6
arahy.Tifrunner.gnm1.ann1.D8NHAG Arachis hypogaea HOM05D004800 ORTHO05D005842 5.6e-36 155.2 205 43.4
Zm00001eb177850 Zea mays HOM05D004800 ORTHO05D005842 9.6e-36 154.5 198 44.9
Nn2g12411 Nelumbo nucifera HOM05D004800 ORTHO05D005842 6.5e-32 141.7 138 52.2
arahy.Tifrunner.gnm1.ann1.1BAV2G Arachis hypogaea HOM05D004800 ORTHO05D005842 8.4e-32 141.4 205 40.0
BcaB04g19808 Brassica carinata HOM05D004800 ORTHO05D005842 1.4e-31 140.6 200 44.5
Peaxi162Scf01038g00137 Petunia axillaris HOM05D004800 ORTHO05D005842 2.5e-31 139.8 118 61.0
MBI14_g09103_MAGBIO Magnolia biondii HOM05D004800 ORTHO05D005842 1.0e-29 134.4 198 41.9
Potri.018G018100 Populus trichocarpa HOM05D004800 ORTHO05D005842 6.9e-26 121.7 118 54.2
Lj5g0013304 Lotus japonicus HOM05D004800 ORTHO05D005842 3.4e-25 119.4 204 36.3
Phvul.001G041300 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 2.9e-24 116.3 203 36.5
arahy.Tifrunner.gnm1.ann1.D9UBCD Arachis hypogaea HOM05D004800 ORTHO05D005842 3.8e-24 115.9 199 34.2
arahy.Tifrunner.gnm1.ann1.CUZL6Q Arachis hypogaea HOM05D004800 ORTHO05D005842 1.1e-23 114.4 199 34.2
arahy.Tifrunner.gnm1.ann1.N4WP0Z Arachis hypogaea HOM05D004800 ORTHO05D005842 1.1e-23 114.4 199 34.2
arahy.Tifrunner.gnm1.ann1.YE5PM3 Arachis hypogaea HOM05D004800 ORTHO05D005842 7.2e-23 111.7 199 33.2
VMungo0647G1387 Vigna mungo HOM05D004800 ORTHO05D005842 2.1e-22 110.2 208 35.1
Nitab4.5_0000617g0080 Nicotiana tabacum HOM05D004800 ORTHO05D005842 6.1e-22 108.6 85 62.4
Glyma.14G101700 Glycine max HOM05D004800 ORTHO05D005842 4.8e-19 99.0 203 31.5
AagrBONN_evm.TU.Sc2ySwM_368.3173 Anthoceros agrestis HOM05D004800 ORTHO05D005842 6.3e-19 98.6 179 33.0
Mapoly0130s0032 Marchantia polymorpha HOM05D004800 ORTHO05D005842 1.2e-17 94.4 178 28.7
TPR.G38911 Trifolium pratense HOM05D004800 ORTHO05D005842 2.0e-17 93.6 191 32.5
Psat6g026000 Pisum sativum HOM05D004800 ORTHO05D005842 7.7e-17 91.7 186 32.8
Pp3c2_14120 Physcomitrium patens HOM05D004800 ORTHO05D005842 1.0e-16 91.3 177 32.8
SMO140G0030 Selaginella moellendorffii HOM05D004800 ORTHO05D005842 2.2e-16 90.1 193 32.6
SEGI_18119 Sequoiadendron giganteum HOM05D004800 ORTHO05D005842 6.1e-14 82.0 103 35.9
Medtr1g014130 Medicago truncatula HOM05D004800 ORTHO05D005842 1.0e-13 81.3 175 33.1
Sopen01g020190 Solanum pennellii HOM05D004800 ORTHO05D005842 4.8e-11 72.4 74 55.4
Sopen01g040360 Solanum pennellii HOM05D004800 ORTHO05D005842 5.3e-10 68.9 74 52.7
Sopen07g026310 Solanum pennellii HOM05D004800 ORTHO05D005842 5.3e-10 68.9 74 52.7
Lalb_Chr24g0401961 Lupinus albus HOM05D004800 ORTHO05D005842 9.1e-10 68.2 88 38.6
Sopen11g020420 Solanum pennellii HOM05D004800 ORTHO05D010331 2.0e-09 67.0 61 60.7
Sopen07g029020 Solanum pennellii HOM05D004800 ORTHO05D005842 7.7e-09 65.1 61 57.4
Zm00001eb353150 Zea mays HOM05D004800 ORTHO05D005842 7.7e-09 65.1 126 35.7
MCO11G643 Micromonas commoda HOM05D004800 ORTHO05D005842 2.2e-08 63.5 114 31.6
CBR_g8579 Chara braunii HOM05D004800 ORTHO05D005842 5.0e-08 62.4 133 23.3
Sed0015580 Sechium edule HOM05D004800 ORTHO05D005842 1.2e-06 57.8 63 39.7


User provided reference genes

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