Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 3.3e-186 655.2 418 100.0
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 2.9e-81 306.6 337 68.2
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 3.9e-78 296.2 336 70.5
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 1.4e-70 271.2 352 66.5
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 2.9e-65 253.4 336 59.2
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 1.6e-63 247.7 337 58.5
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 2.7e-63 246.9 337 52.2
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 3.6e-63 246.5 344 58.4
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 1.0e-62 245.0 331 46.8
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 1.4e-62 244.6 358 58.4
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 1.4e-62 244.6 373 47.5
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 1.8e-62 244.2 339 55.8
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 4.0e-62 243.0 338 55.0
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 5.2e-62 242.7 339 59.0
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 5.2e-62 242.7 359 49.6
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 1.5e-61 241.1 348 59.2
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 7.5e-61 238.8 348 56.9
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 2.2e-60 237.3 341 56.9
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 4.8e-60 236.1 372 51.1
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 8.3e-60 235.3 341 51.3
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 8.3e-60 235.3 377 49.3
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 8.3e-60 235.3 356 51.7
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 1.4e-59 234.6 333 46.8
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 1.6e-58 231.1 379 56.7
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 4.5e-58 229.6 337 52.2
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.0e-57 228.4 349 55.0
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.0e-57 228.4 349 55.0
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 1.0e-57 228.4 385 50.9
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 1.3e-57 228.0 352 53.4
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 1.7e-57 227.6 336 53.3
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 2.3e-57 227.3 334 46.4
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 2.9e-57 226.9 379 45.1
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 3.8e-57 226.5 336 45.2
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 1.5e-56 224.6 376 51.1
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 3.3e-56 223.4 375 47.2
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 7.2e-56 222.2 350 54.6
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 9.5e-56 221.9 368 50.3
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 9.5e-56 221.9 353 55.0
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 1.6e-55 221.1 342 54.7
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 2.1e-55 220.7 333 54.1
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 6.1e-55 219.2 348 50.9
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.0e-54 218.4 348 52.6
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 1.8e-54 217.6 349 53.0
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 3.0e-54 216.9 348 59.8
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 8.9e-54 215.3 357 53.5
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 1.2e-53 214.9 348 57.5
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 2.6e-53 213.8 344 54.4
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.6e-53 213.8 346 45.1
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 3.4e-53 213.4 346 43.9
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 4.4e-53 213.0 331 51.1
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 5.7e-53 212.6 365 55.1
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.3e-52 211.5 344 56.1
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 1.1e-51 208.4 372 48.1
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 1.8e-51 207.6 373 53.4
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 5.4e-51 206.1 349 56.2
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 5.4e-51 206.1 356 53.9
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 9.2e-51 205.3 345 56.5
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 9.2e-51 205.3 351 54.1
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 9.2e-51 205.3 331 50.8
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 1.2e-50 204.9 352 48.6
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.2e-50 204.9 349 55.9
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 2.0e-50 204.1 346 54.6
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 1.0e-49 201.8 336 48.5
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 1.3e-49 201.4 335 50.7
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 1.3e-49 201.4 335 50.7
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 2.3e-49 200.7 365 54.2
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 2.9e-49 200.3 375 48.3
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 8.6e-49 198.7 378 55.3
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 8.6e-49 198.7 369 54.7
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 1.1e-48 198.4 348 53.4
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 1.1e-48 198.4 374 49.5
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 2.5e-48 197.2 340 51.5
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 7.3e-48 195.7 347 49.0
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 7.3e-48 195.7 339 51.9
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 9.5e-48 195.3 339 52.8
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 9.5e-48 195.3 397 44.1
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 1.6e-47 194.5 363 42.4
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 2.8e-47 193.7 333 42.3
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 6.1e-47 192.6 384 44.3
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 1.4e-46 191.4 386 48.7
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 1.8e-46 191.0 352 50.3
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 5.8e-45 186.0 156 60.3
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 1.7e-44 184.5 335 50.7
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 3.7e-44 183.3 336 53.3
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 8.3e-44 182.2 291 53.3
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 3.6e-39 166.8 322 52.5
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 1.5e-37 161.4 343 45.2
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 2.0e-37 161.0 147 60.5
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 4.4e-37 159.8 155 56.1
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 1.3e-36 158.3 345 36.8
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 1.1e-35 155.2 340 47.4
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 4.1e-35 153.3 395 46.6
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 2.7e-34 150.6 376 45.5
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 6.0e-34 149.4 191 47.1
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.0e-33 148.7 144 53.5
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 6.6e-33 146.0 118 62.7
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 8.6e-33 145.6 282 55.0
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 9.5e-32 142.1 267 56.2
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 3.7e-28 130.2 123 52.8
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 9.2e-27 125.6 115 52.2
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 6.6e-25 119.4 270 48.1
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 1.5e-24 118.2 185 39.5
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 1.6e-23 114.8 178 40.4
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 3.1e-22 110.5 399 27.3
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 1.7e-20 104.8 152 42.1
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 2.2e-20 104.4 173 37.0
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 2.9e-20 104.0 281 39.1
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 1.4e-19 101.7 163 37.4
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 2.1e-18 97.8 88 55.7
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 3.5e-18 97.1 102 42.2
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 1.3e-17 95.1 84 65.5
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 8.7e-17 92.4 95 47.4
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 1.9e-16 91.3 95 55.8
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 4.7e-15 86.7 77 61.0
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.2e-13 82.0 75 60.0
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.5e-13 81.6 80 57.5
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 4.2e-11 73.6 119 35.3
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 5.1e-09 66.6 79 40.5
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 6.6e-09 66.2 63 52.4
Oeu042970.1 Olea europaea HOM05D006566 ORTHO05D004366 8.7e-09 65.9 84 46.4
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-08 65.1 99 34.3
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-08 64.7 103 34.0
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-08 64.7 103 34.0
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-08 64.7 106 33.0
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 2.5e-08 64.3 79 39.2
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 3.3e-08 63.9 72 40.3
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 4.8e-07 60.1 103 32.0


User provided reference genes

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